RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 PLECQ15149 4684 aaKnown RBP6.04□□□□□ -1.44
ITGA6-202ENST00000409080 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
ITGA6-202ENST00000409080 DNHD1Q96M86 4753 aa6.03□□□□□ -1.44
ITGA6-202ENST00000409080 MT1HP80294 61 aa6.02□□□□□ -1.45
ITGA6-202ENST00000409080 AKAP9Q99996 3911 aa6.02□□□□□ -1.45
ITGA6-202ENST00000409080 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
ITGA6-202ENST00000409080 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
ITGA6-202ENST00000409080 KRTAP4-1Q9BYQ7 146 aa5.94□□□□□ -1.46
ITGA6-202ENST00000409080 DNAH2Q9P225 4427 aa5.94□□□□□ -1.46
ITGA6-202ENST00000409080 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
ITGA6-202ENST00000409080 LORP23490 312 aaPredicted RBP5.91□□□□□ -1.46
ITGA6-202ENST00000409080 DYNC1H1Q14204 4646 aaKnown RBP5.9□□□□□ -1.46
ITGA6-202ENST00000409080 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
ITGA6-202ENST00000409080 MT2AP02795 61 aa5.87□□□□□ -1.47
ITGA6-202ENST00000409080 DNAH17Q9UFH2 4485 aa5.87□□□□□ -1.47
ITGA6-202ENST00000409080 VPS13CQ709C8 3753 aa5.85□□□□□ -1.47
ITGA6-202ENST00000409080 SPRR2GQ9BYE4 73 aa5.78□□□□□ -1.48
ITGA6-202ENST00000409080 LRP1BQ9NZR2 4599 aa5.78□□□□□ -1.48
ITGA6-202ENST00000409080 ZNF469Q96JG9 3925 aaPredicted RBP5.77□□□□□ -1.49
ITGA6-202ENST00000409080 FAT2Q9NYQ8 4349 aa5.76□□□□□ -1.49
ITGA6-202ENST00000409080 RYR1P21817 5038 aa5.74□□□□□ -1.49
ITGA6-202ENST00000409080 DYNC2H1Q8NCM8 4307 aaKnown RBP5.74□□□□□ -1.49
ITGA6-202ENST00000409080 MT1FP04733 61 aa5.71□□□□□ -1.5
ITGA6-202ENST00000409080 INE1O15225 51 aa5.69□□□□□ -1.5
ITGA6-202ENST00000409080 STARD9Q9P2P6 4700 aa5.67□□□□□ -1.5
ITGA6-202ENST00000409080 SACSQ9NZJ4 4579 aa5.66□□□□□ -1.5
ITGA6-202ENST00000409080 ANK2Q01484 3957 aa5.66□□□□□ -1.5
ITGA6-202ENST00000409080 FAT1Q14517 4588 aa5.62□□□□□ -1.51
ITGA6-202ENST00000409080 DNAH3Q8TD57 4116 aa5.61□□□□□ -1.51
ITGA6-202ENST00000409080 SPRR2FQ96RM1 72 aa5.61□□□□□ -1.51
ITGA6-202ENST00000409080 RYR3Q15413 4870 aa5.58□□□□□ -1.52
ITGA6-202ENST00000409080 PRKDCP78527 4128 aaKnown RBP5.57□□□□□ -1.52
ITGA6-202ENST00000409080 DNAH6Q9C0G6 4158 aa5.57□□□□□ -1.52
ITGA6-202ENST00000409080 DNAH8Q96JB1 4490 aa5.55□□□□□ -1.52
ITGA6-202ENST00000409080 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
ITGA6-202ENST00000409080 CSMD3Q7Z407 3707 aa5.52□□□□□ -1.53
ITGA6-202ENST00000409080 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
ITGA6-202ENST00000409080 RYR2Q92736 4967 aa5.49□□□□□ -1.53
ITGA6-202ENST00000409080 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
ITGA6-202ENST00000409080 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
ITGA6-202ENST00000409080 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
ITGA6-202ENST00000409080 APOBP04114 4563 aaKnown RBP5.45□□□□□ -1.54
ITGA6-202ENST00000409080 HERC1Q15751 4861 aa5.44□□□□□ -1.54
ITGA6-202ENST00000409080 KRTAP19-8Q3LI54 63 aa5.43□□□□□ -1.54
ITGA6-202ENST00000409080 KIAA1109Q2LD37 5005 aa5.43□□□□□ -1.54
ITGA6-202ENST00000409080 FAT3Q8TDW7 4589 aa5.41□□□□□ -1.54
ITGA6-202ENST00000409080 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.55
ITGA6-202ENST00000409080 SPRR2EP22531 72 aa5.35□□□□□ -1.55
ITGA6-202ENST00000409080 SPRR2BP35325 72 aa5.35□□□□□ -1.55
ITGA6-202ENST00000409080 SPRR2AP35326 72 aa5.35□□□□□ -1.55
ITGA6-202ENST00000409080 DNAH7Q8WXX0 4024 aa5.33□□□□□ -1.56
ITGA6-202ENST00000409080 VPS13BQ7Z7G8 4022 aa5.32□□□□□ -1.56
ITGA6-202ENST00000409080 KRTAP19-1Q8IUB9 90 aa5.31□□□□□ -1.56
ITGA6-202ENST00000409080 KMT2AQ03164 3969 aa5.3□□□□□ -1.56
ITGA6-202ENST00000409080 LRP1Q07954 4544 aaKnown RBP5.28□□□□□ -1.56
ITGA6-202ENST00000409080 HSPG2P98160 4391 aa5.27□□□□□ -1.57
ITGA6-202ENST00000409080 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
ITGA6-202ENST00000409080 HERC2O95714 4834 aa5.26□□□□□ -1.57
ITGA6-202ENST00000409080 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
ITGA6-202ENST00000409080 SPRR2DP22532 72 aa5.2□□□□□ -1.58
ITGA6-202ENST00000409080 CMYA5Q8N3K9 4069 aa5.2□□□□□ -1.58
ITGA6-202ENST00000409080 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
ITGA6-202ENST00000409080 PKHD1L1Q86WI1 4243 aa5.18□□□□□ -1.58
ITGA6-202ENST00000409080 MT1BP07438 61 aa5.17□□□□□ -1.58
ITGA6-202ENST00000409080 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
ITGA6-202ENST00000409080 MT1XP80297 61 aa5.16□□□□□ -1.58
ITGA6-202ENST00000409080 LCE2BO14633 110 aa5.15□□□□□ -1.58
ITGA6-202ENST00000409080 LYSTQ99698 3801 aa5.14□□□□□ -1.59
ITGA6-202ENST00000409080 MYCBP2O75592 4640 aa5.12□□□□□ -1.59
ITGA6-202ENST00000409080 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
ITGA6-202ENST00000409080 PKD1P98161 4303 aa5.11□□□□□ -1.59
ITGA6-202ENST00000409080 MT1GP13640 62 aa5.05□□□□□ -1.6
ITGA6-202ENST00000409080 FRAS1Q86XX4 4008 aa5.03□□□□□ -1.6
ITGA6-202ENST00000409080 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
ITGA6-202ENST00000409080 HECTD4Q9Y4D8 3996 aa4.98□□□□□ -1.61
ITGA6-202ENST00000409080 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
ITGA6-202ENST00000409080 HYDINQ4G0P3 5121 aa4.93□□□□□ -1.62
ITGA6-202ENST00000409080 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.62
ITGA6-202ENST00000409080 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
ITGA6-202ENST00000409080 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
ITGA6-202ENST00000409080 LCE2DQ5TA82 110 aaPredicted RBP4.89□□□□□ -1.63
ITGA6-202ENST00000409080 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
ITGA6-202ENST00000409080 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.63
ITGA6-202ENST00000409080 LRP2P98164 4655 aa4.84□□□□□ -1.63
ITGA6-202ENST00000409080 LCE3BQ5TA77 95 aa4.82□□□□□ -1.64
ITGA6-202ENST00000409080 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
ITGA6-202ENST00000409080 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
ITGA6-202ENST00000409080 PKHD1P08F94 4074 aa4.76□□□□□ -1.65
ITGA6-202ENST00000409080 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
ITGA6-202ENST00000409080 ABCA13Q86UQ4 5058 aa4.75□□□□□ -1.65
ITGA6-202ENST00000409080 MT1EP04732 61 aa4.7□□□□□ -1.66
ITGA6-202ENST00000409080 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
ITGA6-202ENST00000409080 MT1LQ93083 61 aa4.69□□□□□ -1.66
ITGA6-202ENST00000409080 KMT2CQ8NEZ4 4911 aaKnown RBP4.68□□□□□ -1.66
ITGA6-202ENST00000409080 LPAP08519 4548 aa4.67□□□□□ -1.66
ITGA6-202ENST00000409080 TNXBP22105 4242 aa4.66□□□□□ -1.66
ITGA6-202ENST00000409080 FLGP20930 4061 aaPredicted RBP4.64□□□□□ -1.67
ITGA6-202ENST00000409080 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
ITGA6-202ENST00000409080 MT1MQ8N339 61 aa4.57□□□□□ -1.68
ITGA6-202ENST00000409080 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms