RNA–Protein interactions for RNA: ENST00000407230.5

NCOA1-206, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 1 (best) BASIC

Gene NCOA1, Length 4,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-206ENST00000407230 MEGF8Q7Z7M0 2845 aa2.46□□□□□ -2.02
NCOA1-206ENST00000407230 DNAH1Q9P2D7 4330 aa2.45□□□□□ -2.02
NCOA1-206ENST00000407230 KRTAP10-12P60413 245 aa2.44□□□□□ -2.02
NCOA1-206ENST00000407230 KRTAP23-1A1A580 65 aa2.43□□□□□ -2.02
NCOA1-206ENST00000407230 INE1O15225 51 aa2.42□□□□□ -2.02
NCOA1-206ENST00000407230 CRCT1Q9UGL9 99 aa2.42□□□□□ -2.02
NCOA1-206ENST00000407230 COL7A1Q02388 2944 aa2.41□□□□□ -2.02
NCOA1-206ENST00000407230 KRTAP10-4P60372 401 aaPredicted RBP2.41□□□□□ -2.02
NCOA1-206ENST00000407230 LYSTQ99698 3801 aa2.41□□□□□ -2.02
NCOA1-206ENST00000407230 DNAH9Q9NYC9 4486 aa2.4□□□□□ -2.02
NCOA1-206ENST00000407230 DNAH10Q8IVF4 4471 aa2.4□□□□□ -2.03
NCOA1-206ENST00000407230 KRTAP4-5Q9BYR2 181 aa2.39□□□□□ -2.03
NCOA1-206ENST00000407230 KRTAP12-3P60328 96 aa2.38□□□□□ -2.03
NCOA1-206ENST00000407230 DNAH7Q8WXX0 4024 aa2.38□□□□□ -2.03
NCOA1-206ENST00000407230 DYNC2H1Q8NCM8 4307 aaKnown RBP2.37□□□□□ -2.03
NCOA1-206ENST00000407230 LCE2CQ5TA81 110 aa2.37□□□□□ -2.03
NCOA1-206ENST00000407230 PLECQ15149 4684 aaKnown RBP2.36□□□□□ -2.03
NCOA1-206ENST00000407230 LCE3AQ5TA76 89 aa2.36□□□□□ -2.03
NCOA1-206ENST00000407230 CSMD3Q7Z407 3707 aa2.35□□□□□ -2.03
NCOA1-206ENST00000407230 LORP23490 312 aaPredicted RBP2.34□□□□□ -2.04
NCOA1-206ENST00000407230 STARD9Q9P2P6 4700 aa2.32□□□□□ -2.04
NCOA1-206ENST00000407230 VPS13DQ5THJ4 4388 aa2.31□□□□□ -2.04
NCOA1-206ENST00000407230 PRKDCP78527 4128 aaKnown RBP2.31□□□□□ -2.04
NCOA1-206ENST00000407230 DNAH2Q9P225 4427 aa2.3□□□□□ -2.04
NCOA1-206ENST00000407230 KMT2AQ03164 3969 aa2.3□□□□□ -2.04
NCOA1-206ENST00000407230 HECTD4Q9Y4D8 3996 aa2.28□□□□□ -2.04
NCOA1-206ENST00000407230 DNAH17Q9UFH2 4485 aa2.27□□□□□ -2.05
NCOA1-206ENST00000407230 DNHD1Q96M86 4753 aa2.27□□□□□ -2.05
NCOA1-206ENST00000407230 ALMS1Q8TCU4 4167 aa2.27□□□□□ -2.05
NCOA1-206ENST00000407230 DNAH8Q96JB1 4490 aa2.26□□□□□ -2.05
NCOA1-206ENST00000407230 FRAS1Q86XX4 4008 aa2.26□□□□□ -2.05
NCOA1-206ENST00000407230 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.25□□□□□ -2.05
NCOA1-206ENST00000407230 KRTAP10-5P60370 271 aa2.25□□□□□ -2.05
NCOA1-206ENST00000407230 KRTAP8-1Q8IUC2 63 aa2.25□□□□□ -2.05
NCOA1-206ENST00000407230 DNAH6Q9C0G6 4158 aa2.23□□□□□ -2.05
NCOA1-206ENST00000407230 DNAH5Q8TE73 4624 aa2.23□□□□□ -2.05
NCOA1-206ENST00000407230 DNAH11Q96DT5 4516 aa2.23□□□□□ -2.05
NCOA1-206ENST00000407230 HYDINQ4G0P3 5121 aa2.21□□□□□ -2.06
NCOA1-206ENST00000407230 KRTAP4-1Q9BYQ7 146 aa2.21□□□□□ -2.06
NCOA1-206ENST00000407230 PKD1P98161 4303 aa2.2□□□□□ -2.06
NCOA1-206ENST00000407230 FAT2Q9NYQ8 4349 aa2.2□□□□□ -2.06
NCOA1-206ENST00000407230 KRTAP4-8Q9BYQ9 185 aa2.19□□□□□ -2.06
NCOA1-206ENST00000407230 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
NCOA1-206ENST00000407230 MT1HP80294 61 aa2.17□□□□□ -2.06
NCOA1-206ENST00000407230 KRTAP9-2Q9BYQ4 174 aa2.17□□□□□ -2.06
NCOA1-206ENST00000407230 MT2AP02795 61 aa2.17□□□□□ -2.06
NCOA1-206ENST00000407230 KRTAP19-4Q3LI73 84 aa2.16□□□□□ -2.06
NCOA1-206ENST00000407230 FAT1Q14517 4588 aa2.15□□□□□ -2.06
NCOA1-206ENST00000407230 KRTAP4-12Q9BQ66 201 aa2.15□□□□□ -2.06
NCOA1-206ENST00000407230 VPS13BQ7Z7G8 4022 aa2.15□□□□□ -2.07
NCOA1-206ENST00000407230 SACSQ9NZJ4 4579 aa2.14□□□□□ -2.07
NCOA1-206ENST00000407230 SPRR2GQ9BYE4 73 aa2.14□□□□□ -2.07
NCOA1-206ENST00000407230 DYNC1H1Q14204 4646 aaKnown RBP2.12□□□□□ -2.07
NCOA1-206ENST00000407230 MT1FP04733 61 aa2.12□□□□□ -2.07
NCOA1-206ENST00000407230 PKHD1P08F94 4074 aa2.11□□□□□ -2.07
NCOA1-206ENST00000407230 KRTAP9-6A0A140TA67 174 aa2.11□□□□□ -2.07
NCOA1-206ENST00000407230 KRTAP19-5Q3LI72 72 aa2.1□□□□□ -2.07
NCOA1-206ENST00000407230 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
NCOA1-206ENST00000407230 KRTAP9-4Q9BYQ2 154 aa2.1□□□□□ -2.07
NCOA1-206ENST00000407230 APOBP04114 4563 aaKnown RBP2.09□□□□□ -2.08
NCOA1-206ENST00000407230 RYR1P21817 5038 aa2.08□□□□□ -2.08
NCOA1-206ENST00000407230 SPRR2FQ96RM1 72 aa2.08□□□□□ -2.08
NCOA1-206ENST00000407230 KRTAP10-7P60409 375 aaPredicted RBP2.07□□□□□ -2.08
NCOA1-206ENST00000407230 RYR2Q92736 4967 aa2.07□□□□□ -2.08
NCOA1-206ENST00000407230 LCE3CQ5T5A8 94 aa2.07□□□□□ -2.08
NCOA1-206ENST00000407230 PKHD1L1Q86WI1 4243 aa2.06□□□□□ -2.08
NCOA1-206ENST00000407230 KMT2CQ8NEZ4 4911 aaKnown RBP2.04□□□□□ -2.08
NCOA1-206ENST00000407230 KRTAP19-1Q8IUB9 90 aa2.04□□□□□ -2.08
NCOA1-206ENST00000407230 TNXBP22105 4242 aa2.01□□□□□ -2.09
NCOA1-206ENST00000407230 HSPG2P98160 4391 aa2.01□□□□□ -2.09
NCOA1-206ENST00000407230 FAT3Q8TDW7 4589 aa2.01□□□□□ -2.09
NCOA1-206ENST00000407230 LRP1Q07954 4544 aaKnown RBP2.01□□□□□ -2.09
NCOA1-206ENST00000407230 RYR3Q15413 4870 aa2□□□□□ -2.09
NCOA1-206ENST00000407230 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
NCOA1-206ENST00000407230 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
NCOA1-206ENST00000407230 KRTAP4-8A0A0G2JLE6 195 aa1.98□□□□□ -2.09
NCOA1-206ENST00000407230 HERC1Q15751 4861 aa1.95□□□□□ -2.1
NCOA1-206ENST00000407230 MT1XP80297 61 aa1.95□□□□□ -2.1
NCOA1-206ENST00000407230 SPRR2EP22531 72 aa1.94□□□□□ -2.1
NCOA1-206ENST00000407230 SPRR2BP35325 72 aa1.94□□□□□ -2.1
NCOA1-206ENST00000407230 SPRR2AP35326 72 aa1.94□□□□□ -2.1
NCOA1-206ENST00000407230 LCE3BQ5TA77 95 aa1.94□□□□□ -2.1
NCOA1-206ENST00000407230 MYCBP2O75592 4640 aa1.94□□□□□ -2.1
NCOA1-206ENST00000407230 EPPK1P58107 5090 aaKnown RBP1.93□□□□□ -2.1
NCOA1-206ENST00000407230 KIAA1109Q2LD37 5005 aa1.93□□□□□ -2.1
NCOA1-206ENST00000407230 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
NCOA1-206ENST00000407230 MT1BP07438 61 aa1.92□□□□□ -2.1
NCOA1-206ENST00000407230 MT1GP13640 62 aa1.92□□□□□ -2.1
NCOA1-206ENST00000407230 KRTAP4-7Q9BYR0 210 aa1.92□□□□□ -2.1
NCOA1-206ENST00000407230 LPAP08519 4548 aa1.91□□□□□ -2.1
NCOA1-206ENST00000407230 KRTAP12-4P60329 112 aa1.9□□□□□ -2.11
NCOA1-206ENST00000407230 KRTAP9-8Q9BYQ0 159 aa1.89□□□□□ -2.11
NCOA1-206ENST00000407230 SPRR2DP22532 72 aa1.88□□□□□ -2.11
NCOA1-206ENST00000407230 MT3P25713 68 aa1.88□□□□□ -2.11
NCOA1-206ENST00000407230 ABCA13Q86UQ4 5058 aa1.87□□□□□ -2.11
NCOA1-206ENST00000407230 LRP2P98164 4655 aa1.87□□□□□ -2.11
NCOA1-206ENST00000407230 SPRR5A0A1B0GTR4 108 aa1.86□□□□□ -2.11
NCOA1-206ENST00000407230 KRTAP9-3Q9BYQ3 159 aa1.85□□□□□ -2.11
NCOA1-206ENST00000407230 KRTAP4-9Q9BYQ8 210 aa1.85□□□□□ -2.11
NCOA1-206ENST00000407230 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms