RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 KRTAP3-2Q9BYR7 98 aa5.24□□□□□ -1.57
SMCR8-201ENST00000406438 CMYA5Q8N3K9 4069 aa5.22□□□□□ -1.57
SMCR8-201ENST00000406438 DNAH3Q8TD57 4116 aa5.21□□□□□ -1.58
SMCR8-201ENST00000406438 FRAS1Q86XX4 4008 aa5.2□□□□□ -1.58
SMCR8-201ENST00000406438 DNAH7Q8WXX0 4024 aa5.19□□□□□ -1.58
SMCR8-201ENST00000406438 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
SMCR8-201ENST00000406438 DNAH1Q9P2D7 4330 aa5.17□□□□□ -1.58
SMCR8-201ENST00000406438 DNAH2Q9P225 4427 aa5.15□□□□□ -1.59
SMCR8-201ENST00000406438 KMT2AQ03164 3969 aa5.14□□□□□ -1.59
SMCR8-201ENST00000406438 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
SMCR8-201ENST00000406438 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
SMCR8-201ENST00000406438 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
SMCR8-201ENST00000406438 ANK2Q01484 3957 aa5.09□□□□□ -1.59
SMCR8-201ENST00000406438 KRTAP4-5Q9BYR2 181 aa5.07□□□□□ -1.6
SMCR8-201ENST00000406438 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
SMCR8-201ENST00000406438 HECTD4Q9Y4D8 3996 aa5.01□□□□□ -1.61
SMCR8-201ENST00000406438 LORP23490 312 aaPredicted RBP4.96□□□□□ -1.62
SMCR8-201ENST00000406438 DNAH6Q9C0G6 4158 aa4.89□□□□□ -1.63
SMCR8-201ENST00000406438 DNAH9Q9NYC9 4486 aa4.83□□□□□ -1.64
SMCR8-201ENST00000406438 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
SMCR8-201ENST00000406438 FAT2Q9NYQ8 4349 aa4.78□□□□□ -1.64
SMCR8-201ENST00000406438 PRKDCP78527 4128 aaKnown RBP4.75□□□□□ -1.65
SMCR8-201ENST00000406438 DNAH10Q8IVF4 4471 aa4.74□□□□□ -1.65
SMCR8-201ENST00000406438 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
SMCR8-201ENST00000406438 MT1HP80294 61 aa4.71□□□□□ -1.66
SMCR8-201ENST00000406438 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
SMCR8-201ENST00000406438 DYNC2H1Q8NCM8 4307 aaKnown RBP4.64□□□□□ -1.67
SMCR8-201ENST00000406438 LCE3CQ5T5A8 94 aa4.62□□□□□ -1.67
SMCR8-201ENST00000406438 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
SMCR8-201ENST00000406438 VPS13DQ5THJ4 4388 aa4.61□□□□□ -1.67
SMCR8-201ENST00000406438 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
SMCR8-201ENST00000406438 DNAH8Q96JB1 4490 aa4.6□□□□□ -1.67
SMCR8-201ENST00000406438 KRTAP4-1Q9BYQ7 146 aa4.59□□□□□ -1.67
SMCR8-201ENST00000406438 MT2AP02795 61 aa4.58□□□□□ -1.68
SMCR8-201ENST00000406438 DNAH11Q96DT5 4516 aa4.57□□□□□ -1.68
SMCR8-201ENST00000406438 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
SMCR8-201ENST00000406438 DNAH17Q9UFH2 4485 aa4.49□□□□□ -1.69
SMCR8-201ENST00000406438 STARD9Q9P2P6 4700 aa4.48□□□□□ -1.69
SMCR8-201ENST00000406438 MT1FP04733 61 aa4.47□□□□□ -1.69
SMCR8-201ENST00000406438 SPRR2EP22531 72 aa4.46□□□□□ -1.69
SMCR8-201ENST00000406438 SPRR2BP35325 72 aa4.46□□□□□ -1.69
SMCR8-201ENST00000406438 SPRR2AP35326 72 aa4.46□□□□□ -1.69
SMCR8-201ENST00000406438 PLECQ15149 4684 aaKnown RBP4.45□□□□□ -1.7
SMCR8-201ENST00000406438 LCE3BQ5TA77 95 aa4.39□□□□□ -1.71
SMCR8-201ENST00000406438 DNAH5Q8TE73 4624 aa4.37□□□□□ -1.71
SMCR8-201ENST00000406438 PKHD1P08F94 4074 aa4.35□□□□□ -1.71
SMCR8-201ENST00000406438 PKHD1L1Q86WI1 4243 aa4.34□□□□□ -1.71
SMCR8-201ENST00000406438 SPRR2DP22532 72 aa4.33□□□□□ -1.72
SMCR8-201ENST00000406438 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
SMCR8-201ENST00000406438 LCE2BO14633 110 aa4.33□□□□□ -1.72
SMCR8-201ENST00000406438 LRP1BQ9NZR2 4599 aa4.31□□□□□ -1.72
SMCR8-201ENST00000406438 PKD1P98161 4303 aa4.22□□□□□ -1.73
SMCR8-201ENST00000406438 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
SMCR8-201ENST00000406438 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
SMCR8-201ENST00000406438 MT1GP13640 62 aa4.2□□□□□ -1.74
SMCR8-201ENST00000406438 MT1XP80297 61 aa4.15□□□□□ -1.74
SMCR8-201ENST00000406438 KRTAP19-1Q8IUB9 90 aa4.15□□□□□ -1.75
SMCR8-201ENST00000406438 FAT1Q14517 4588 aa4.15□□□□□ -1.75
SMCR8-201ENST00000406438 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
SMCR8-201ENST00000406438 APOBP04114 4563 aaKnown RBP4.1□□□□□ -1.75
SMCR8-201ENST00000406438 TNXBP22105 4242 aa4.08□□□□□ -1.76
SMCR8-201ENST00000406438 LRP1Q07954 4544 aaKnown RBP4.06□□□□□ -1.76
SMCR8-201ENST00000406438 LCE2CQ5TA81 110 aa4.06□□□□□ -1.76
SMCR8-201ENST00000406438 FAT3Q8TDW7 4589 aa4.03□□□□□ -1.76
SMCR8-201ENST00000406438 DYNC1H1Q14204 4646 aaKnown RBP4.03□□□□□ -1.76
SMCR8-201ENST00000406438 SACSQ9NZJ4 4579 aa4.03□□□□□ -1.76
SMCR8-201ENST00000406438 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
SMCR8-201ENST00000406438 HSPG2P98160 4391 aa4□□□□□ -1.77
SMCR8-201ENST00000406438 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
SMCR8-201ENST00000406438 KRTAP4-8A0A0G2JLE6 195 aa3.99□□□□□ -1.77
SMCR8-201ENST00000406438 KRTAP4-8Q9BYQ9 185 aa3.99□□□□□ -1.77
SMCR8-201ENST00000406438 MT1BP07438 61 aa3.98□□□□□ -1.77
SMCR8-201ENST00000406438 LCE2DQ5TA82 110 aaPredicted RBP3.97□□□□□ -1.77
SMCR8-201ENST00000406438 MYCBP2O75592 4640 aa3.93□□□□□ -1.78
SMCR8-201ENST00000406438 MT3P25713 68 aa3.92□□□□□ -1.78
SMCR8-201ENST00000406438 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
SMCR8-201ENST00000406438 KRTAP9-3Q9BYQ3 159 aa3.9□□□□□ -1.79
SMCR8-201ENST00000406438 MT1LQ93083 61 aa3.89□□□□□ -1.79
SMCR8-201ENST00000406438 LPAP08519 4548 aa3.88□□□□□ -1.79
SMCR8-201ENST00000406438 MT4P47944 62 aa3.85□□□□□ -1.79
SMCR8-201ENST00000406438 MT1EP04732 61 aa3.77□□□□□ -1.81
SMCR8-201ENST00000406438 DNHD1Q96M86 4753 aa3.76□□□□□ -1.81
SMCR8-201ENST00000406438 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
SMCR8-201ENST00000406438 PRM1P04553 51 aa3.73□□□□□ -1.81
SMCR8-201ENST00000406438 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
SMCR8-201ENST00000406438 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
SMCR8-201ENST00000406438 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
SMCR8-201ENST00000406438 PCLOQ9Y6V0 5065 aa3.69□□□□□ -1.82
SMCR8-201ENST00000406438 RYR1P21817 5038 aa3.69□□□□□ -1.82
SMCR8-201ENST00000406438 MT1MQ8N339 61 aa3.67□□□□□ -1.82
SMCR8-201ENST00000406438 LRP2P98164 4655 aa3.63□□□□□ -1.83
SMCR8-201ENST00000406438 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
SMCR8-201ENST00000406438 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
SMCR8-201ENST00000406438 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
SMCR8-201ENST00000406438 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
SMCR8-201ENST00000406438 RYR3Q15413 4870 aa3.51□□□□□ -1.85
SMCR8-201ENST00000406438 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
SMCR8-201ENST00000406438 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
SMCR8-201ENST00000406438 KRTAP19-2Q3LHN2 52 aa3.46□□□□□ -1.85
SMCR8-201ENST00000406438 HYDINQ4G0P3 5121 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms