RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 DNAH7Q8WXX0 4024 aa4.44□□□□□ -1.7
NCOA1-204ENST00000405141 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
NCOA1-204ENST00000405141 KRTAP3-2Q9BYR7 98 aa4.42□□□□□ -1.7
NCOA1-204ENST00000405141 DNAH3Q8TD57 4116 aa4.42□□□□□ -1.7
NCOA1-204ENST00000405141 ALMS1Q8TCU4 4167 aa4.4□□□□□ -1.71
NCOA1-204ENST00000405141 PLECQ15149 4684 aaKnown RBP4.37□□□□□ -1.71
NCOA1-204ENST00000405141 VPS13BQ7Z7G8 4022 aa4.35□□□□□ -1.71
NCOA1-204ENST00000405141 HECTD4Q9Y4D8 3996 aa4.32□□□□□ -1.72
NCOA1-204ENST00000405141 KRTAP4-5Q9BYR2 181 aa4.32□□□□□ -1.72
NCOA1-204ENST00000405141 STARD9Q9P2P6 4700 aa4.31□□□□□ -1.72
NCOA1-204ENST00000405141 DNAH2Q9P225 4427 aa4.31□□□□□ -1.72
NCOA1-204ENST00000405141 DNAH6Q9C0G6 4158 aa4.29□□□□□ -1.72
NCOA1-204ENST00000405141 MT1HL1P0DM35 61 aa4.28□□□□□ -1.72
NCOA1-204ENST00000405141 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
NCOA1-204ENST00000405141 DNAH11Q96DT5 4516 aa4.25□□□□□ -1.73
NCOA1-204ENST00000405141 VPS13DQ5THJ4 4388 aa4.22□□□□□ -1.73
NCOA1-204ENST00000405141 LORP23490 312 aaPredicted RBP4.21□□□□□ -1.74
NCOA1-204ENST00000405141 FAT2Q9NYQ8 4349 aa4.15□□□□□ -1.75
NCOA1-204ENST00000405141 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
NCOA1-204ENST00000405141 DNAH5Q8TE73 4624 aa4.14□□□□□ -1.75
NCOA1-204ENST00000405141 DNAH8Q96JB1 4490 aa4.13□□□□□ -1.75
NCOA1-204ENST00000405141 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
NCOA1-204ENST00000405141 INE1O15225 51 aa4.12□□□□□ -1.75
NCOA1-204ENST00000405141 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
NCOA1-204ENST00000405141 DNAH17Q9UFH2 4485 aa4.12□□□□□ -1.75
NCOA1-204ENST00000405141 DYNC2H1Q8NCM8 4307 aaKnown RBP4.11□□□□□ -1.75
NCOA1-204ENST00000405141 PKHD1P08F94 4074 aa4.09□□□□□ -1.75
NCOA1-204ENST00000405141 LRP1BQ9NZR2 4599 aa4.09□□□□□ -1.76
NCOA1-204ENST00000405141 DNHD1Q96M86 4753 aa4.07□□□□□ -1.76
NCOA1-204ENST00000405141 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
NCOA1-204ENST00000405141 FAT1Q14517 4588 aa4.04□□□□□ -1.76
NCOA1-204ENST00000405141 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
NCOA1-204ENST00000405141 KRTAP4-1Q9BYQ7 146 aa3.94□□□□□ -1.78
NCOA1-204ENST00000405141 SACSQ9NZJ4 4579 aa3.93□□□□□ -1.78
NCOA1-204ENST00000405141 FAT3Q8TDW7 4589 aa3.91□□□□□ -1.78
NCOA1-204ENST00000405141 DYNC1H1Q14204 4646 aaKnown RBP3.89□□□□□ -1.79
NCOA1-204ENST00000405141 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
NCOA1-204ENST00000405141 LRP1Q07954 4544 aaKnown RBP3.87□□□□□ -1.79
NCOA1-204ENST00000405141 PKD1P98161 4303 aa3.82□□□□□ -1.8
NCOA1-204ENST00000405141 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
NCOA1-204ENST00000405141 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
NCOA1-204ENST00000405141 HSPG2P98160 4391 aa3.8□□□□□ -1.8
NCOA1-204ENST00000405141 HYDINQ4G0P3 5121 aa3.78□□□□□ -1.8
NCOA1-204ENST00000405141 KRTAP17-1Q9BYP8 105 aa3.78□□□□□ -1.8
NCOA1-204ENST00000405141 MT1HP80294 61 aa3.78□□□□□ -1.8
NCOA1-204ENST00000405141 LPAP08519 4548 aa3.77□□□□□ -1.81
NCOA1-204ENST00000405141 RYR1P21817 5038 aa3.74□□□□□ -1.81
NCOA1-204ENST00000405141 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
NCOA1-204ENST00000405141 MT2AP02795 61 aa3.72□□□□□ -1.81
NCOA1-204ENST00000405141 TNXBP22105 4242 aa3.71□□□□□ -1.82
NCOA1-204ENST00000405141 SPRR2GQ9BYE4 73 aa3.69□□□□□ -1.82
NCOA1-204ENST00000405141 PKHD1L1Q86WI1 4243 aa3.69□□□□□ -1.82
NCOA1-204ENST00000405141 MT1FP04733 61 aa3.68□□□□□ -1.82
NCOA1-204ENST00000405141 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
NCOA1-204ENST00000405141 RYR3Q15413 4870 aa3.62□□□□□ -1.83
NCOA1-204ENST00000405141 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
NCOA1-204ENST00000405141 LRP2P98164 4655 aa3.61□□□□□ -1.83
NCOA1-204ENST00000405141 RYR2Q92736 4967 aa3.57□□□□□ -1.84
NCOA1-204ENST00000405141 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
NCOA1-204ENST00000405141 BIRC6Q9NR09 4857 aa3.51□□□□□ -1.85
NCOA1-204ENST00000405141 KMT2CQ8NEZ4 4911 aaKnown RBP3.5□□□□□ -1.85
NCOA1-204ENST00000405141 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
NCOA1-204ENST00000405141 KIAA1109Q2LD37 5005 aa3.47□□□□□ -1.85
NCOA1-204ENST00000405141 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.85
NCOA1-204ENST00000405141 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
NCOA1-204ENST00000405141 MT1XP80297 61 aa3.44□□□□□ -1.86
NCOA1-204ENST00000405141 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
NCOA1-204ENST00000405141 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
NCOA1-204ENST00000405141 MT1BP07438 61 aa3.36□□□□□ -1.87
NCOA1-204ENST00000405141 LCE3BQ5TA77 95 aa3.36□□□□□ -1.87
NCOA1-204ENST00000405141 MT1GP13640 62 aa3.35□□□□□ -1.87
NCOA1-204ENST00000405141 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.87
NCOA1-204ENST00000405141 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.87
NCOA1-204ENST00000405141 HERC2O95714 4834 aa3.34□□□□□ -1.88
NCOA1-204ENST00000405141 KRTAP9-8Q9BYQ0 159 aa3.32□□□□□ -1.88
NCOA1-204ENST00000405141 LCE2CQ5TA81 110 aa3.31□□□□□ -1.88
NCOA1-204ENST00000405141 HERC1Q15751 4861 aa3.29□□□□□ -1.88
NCOA1-204ENST00000405141 KRTAP12-4P60329 112 aa3.28□□□□□ -1.88
NCOA1-204ENST00000405141 EPPK1P58107 5090 aaKnown RBP3.27□□□□□ -1.89
NCOA1-204ENST00000405141 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
NCOA1-204ENST00000405141 MUC17Q685J3 4493 aa3.24□□□□□ -1.89
NCOA1-204ENST00000405141 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
NCOA1-204ENST00000405141 SPRR2EP22531 72 aa3.22□□□□□ -1.89
NCOA1-204ENST00000405141 SPRR2BP35325 72 aa3.22□□□□□ -1.89
NCOA1-204ENST00000405141 SPRR2AP35326 72 aa3.22□□□□□ -1.89
NCOA1-204ENST00000405141 KRTAP19-4Q3LI73 84 aa3.21□□□□□ -1.9
NCOA1-204ENST00000405141 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
NCOA1-204ENST00000405141 PCLOQ9Y6V0 5065 aa3.14□□□□□ -1.91
NCOA1-204ENST00000405141 LCE2BO14633 110 aa3.13□□□□□ -1.91
NCOA1-204ENST00000405141 MUC2Q02817 5179 aa3.12□□□□□ -1.91
NCOA1-204ENST00000405141 ABCA13Q86UQ4 5058 aa3.11□□□□□ -1.91
NCOA1-204ENST00000405141 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
NCOA1-204ENST00000405141 SPRR2DP22532 72 aa3.09□□□□□ -1.91
NCOA1-204ENST00000405141 MT1LQ93083 61 aa3.09□□□□□ -1.91
NCOA1-204ENST00000405141 LOC100996750A0A140TA64 210 aa3.08□□□□□ -1.92
NCOA1-204ENST00000405141 FSIP2Q5CZC0 6907 aa3.06□□□□□ -1.92
NCOA1-204ENST00000405141 MT1EP04732 61 aa3.05□□□□□ -1.92
NCOA1-204ENST00000405141 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
NCOA1-204ENST00000405141 KRTAP19-3Q7Z4W3 81 aa3.03□□□□□ -1.93
NCOA1-204ENST00000405141 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms