RNA–Protein interactions for RNA: ENST00000403303.5

CCDC178-204, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-204ENST00000403303 FAT4Q6V0I7 4981 aa1.65□□□□□ -2.14
CCDC178-204ENST00000403303 IGLC3P0DOY3 106 aa1.65□□□□□ -2.15
CCDC178-204ENST00000403303 LINC01600Q96MT4 127 aa1.65□□□□□ -2.15
CCDC178-204ENST00000403303 SMCO4Q9NRQ5 59 aa1.65□□□□□ -2.15
CCDC178-204ENST00000403303 GNG13Q9P2W3 67 aa1.65□□□□□ -2.15
CCDC178-204ENST00000403303 M0R2N4 97 aa1.65□□□□□ -2.15
CCDC178-204ENST00000403303 NOP10Q9NPE3 64 aaKnown RBP1.65□□□□□ -2.15
CCDC178-204ENST00000403303 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
CCDC178-204ENST00000403303 KRTAP19-2Q3LHN2 52 aa1.64□□□□□ -2.15
CCDC178-204ENST00000403303 IGIPA6NJ69 53 aa1.64□□□□□ -2.15
CCDC178-204ENST00000403303 INE1O15225 51 aa1.64□□□□□ -2.15
CCDC178-204ENST00000403303 NDUFC1O43677 76 aa1.64□□□□□ -2.15
CCDC178-204ENST00000403303 DEFB121Q5J5C9 76 aa1.64□□□□□ -2.15
CCDC178-204ENST00000403303 UBE2D4Q9Y2X8 147 aa1.64□□□□□ -2.15
CCDC178-204ENST00000403303 ARMS2P0C7Q2 107 aa1.64□□□□□ -2.15
CCDC178-204ENST00000403303 TRBV25-1A0A075B6N4 114 aa1.63□□□□□ -2.15
CCDC178-204ENST00000403303 SPRR1AP35321 89 aa1.63□□□□□ -2.15
CCDC178-204ENST00000403303 SPINK7P58062 85 aa1.63□□□□□ -2.15
CCDC178-204ENST00000403303 Q6ZRX8 168 aa1.63□□□□□ -2.15
CCDC178-204ENST00000403303 WFDC10BQ8IUB3 73 aa1.63□□□□□ -2.15
CCDC178-204ENST00000403303 COX6CP09669 75 aa1.62□□□□□ -2.15
CCDC178-204ENST00000403303 SPINK6Q6UWN8 80 aa1.61□□□□□ -2.15
CCDC178-204ENST00000403303 KLKP1Q107X0 134 aa1.61□□□□□ -2.15
CCDC178-204ENST00000403303 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
CCDC178-204ENST00000403303 NOTCH1P46531 2555 aa1.6□□□□□ -2.15
CCDC178-204ENST00000403303 KANTRA0A1W2PQU2 76 aa1.6□□□□□ -2.15
CCDC178-204ENST00000403303 I3L3M4 83 aa1.6□□□□□ -2.15
CCDC178-204ENST00000403303 MGPP08493 103 aa1.6□□□□□ -2.15
CCDC178-204ENST00000403303 SPRR1BP22528 89 aa1.6□□□□□ -2.15
CCDC178-204ENST00000403303 LINC00959A0A1B0GUT2 108 aa1.59□□□□□ -2.15
CCDC178-204ENST00000403303 BCE1O60756 84 aa1.59□□□□□ -2.15
CCDC178-204ENST00000403303 COX17Q14061 63 aa1.59□□□□□ -2.15
CCDC178-204ENST00000403303 UQCR11O14957 56 aa1.59□□□□□ -2.15
CCDC178-204ENST00000403303 SMIM13P0DJ93 91 aa1.59□□□□□ -2.15
CCDC178-204ENST00000403303 Q8IZM0 81 aa1.59□□□□□ -2.15
CCDC178-204ENST00000403303 DEFB104AQ8WTQ1 72 aa1.59□□□□□ -2.15
CCDC178-204ENST00000403303 WNK1Q9H4A3 2382 aa1.59□□□□□ -2.16
CCDC178-204ENST00000403303 MYMXA0A1B0GTQ4 84 aa1.59□□□□□ -2.16
CCDC178-204ENST00000403303 LPAP08519 4548 aa1.59□□□□□ -2.16
CCDC178-204ENST00000403303 A0A1B0GUT8 65 aa1.58□□□□□ -2.16
CCDC178-204ENST00000403303 Q5VSD8 79 aa1.58□□□□□ -2.16
CCDC178-204ENST00000403303 LINC00643Q86TS7 51 aa1.58□□□□□ -2.16
CCDC178-204ENST00000403303 SMIM2Q9BVW6 85 aa1.58□□□□□ -2.16
CCDC178-204ENST00000403303 DEFB4AO15263 64 aa1.58□□□□□ -2.16
CCDC178-204ENST00000403303 SRRM2Q9UQ35 2752 aaKnown RBP1.58□□□□□ -2.16
CCDC178-204ENST00000403303 ZCCHC13Q8WW36 166 aaKnown RBP1.57□□□□□ -2.16
CCDC178-204ENST00000403303 UNQ6190/PRO20217Q6UXQ8 127 aa1.57□□□□□ -2.16
CCDC178-204ENST00000403303 LINC00472Q9H8W2 130 aa1.56□□□□□ -2.16
CCDC178-204ENST00000403303 SPRR5A0A1B0GTR4 108 aa1.56□□□□□ -2.16
CCDC178-204ENST00000403303 UBE2DNLQ8IWF7 75 aa1.56□□□□□ -2.16
CCDC178-204ENST00000403303 A0A1B0GU69 56 aa1.55□□□□□ -2.16
CCDC178-204ENST00000403303 SFTA3P0C7M3 94 aa1.55□□□□□ -2.16
CCDC178-204ENST00000403303 DEFB130BP0DP73 79 aa1.55□□□□□ -2.16
CCDC178-204ENST00000403303 DEFB130AP0DP74 79 aa1.55□□□□□ -2.16
CCDC178-204ENST00000403303 RPL39LQ96EH5 51 aaKnown RBP1.55□□□□□ -2.16
CCDC178-204ENST00000403303 KCNQ1DNQ9H478 68 aa1.55□□□□□ -2.16
CCDC178-204ENST00000403303 C6orf48Q9UBA6 75 aa1.55□□□□□ -2.16
CCDC178-204ENST00000403303 RNF213Q63HN8 5207 aa1.54□□□□□ -2.16
CCDC178-204ENST00000403303 FCER1GP30273 86 aa1.54□□□□□ -2.16
CCDC178-204ENST00000403303 A0A096LNI7 61 aa1.54□□□□□ -2.16
CCDC178-204ENST00000403303 SMIM11BQ8TCY0 68 aa1.54□□□□□ -2.16
CCDC178-204ENST00000403303 UBR4Q5T4S7 5183 aa1.53□□□□□ -2.16
CCDC178-204ENST00000403303 COX6A2Q02221 97 aa1.53□□□□□ -2.16
CCDC178-204ENST00000403303 IGLV5-48A0A075B6I7 105 aa1.53□□□□□ -2.16
CCDC178-204ENST00000403303 NDUFA1O15239 70 aa1.53□□□□□ -2.17
CCDC178-204ENST00000403303 ACYP1P07311 99 aa1.53□□□□□ -2.17
CCDC178-204ENST00000403303 C18orf32Q8TCD1 76 aa1.53□□□□□ -2.17
CCDC178-204ENST00000403303 H0Y9P7 68 aa1.51□□□□□ -2.17
CCDC178-204ENST00000403303 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
CCDC178-204ENST00000403303 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
CCDC178-204ENST00000403303 KRTAP9-6A8MVA2 160 aa1.48□□□□□ -2.17
CCDC178-204ENST00000403303 IFI27P40305 119 aaPredicted RBP1.48□□□□□ -2.17
CCDC178-204ENST00000403303 RPL39P62891 51 aaKnown RBP1.48□□□□□ -2.17
CCDC178-204ENST00000403303 ANGP03950 147 aaKnown RBP1.48□□□□□ -2.17
CCDC178-204ENST00000403303 SPRR4Q96PI1 79 aa1.48□□□□□ -2.17
CCDC178-204ENST00000403303 DMBT1Q9UGM3 2413 aaPredicted RBP1.48□□□□□ -2.17
CCDC178-204ENST00000403303 PLNP26678 52 aa1.47□□□□□ -2.17
CCDC178-204ENST00000403303 RPL37P61927 97 aaKnown RBP1.47□□□□□ -2.17
CCDC178-204ENST00000403303 CDKN2A-AS1Q9UH64 79 aa1.47□□□□□ -2.17
CCDC178-204ENST00000403303 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
CCDC178-204ENST00000403303 SSPOA2VEC9 5147 aa1.46□□□□□ -2.18
CCDC178-204ENST00000403303 SYNE1Q8NF91 8797 aaKnown RBP1.46□□□□□ -2.18
CCDC178-204ENST00000403303 LCE3AQ5TA76 89 aa1.45□□□□□ -2.18
CCDC178-204ENST00000403303 SPINK1P00995 79 aa1.44□□□□□ -2.18
CCDC178-204ENST00000403303 HTN3P15516 51 aa1.44□□□□□ -2.18
CCDC178-204ENST00000403303 MT1HP80294 61 aa1.43□□□□□ -2.18
CCDC178-204ENST00000403303 LINC00575Q6W349 94 aa1.43□□□□□ -2.18
CCDC178-204ENST00000403303 HTN1P15515 57 aa1.42□□□□□ -2.18
CCDC178-204ENST00000403303 LINC00308Q8TCZ7 52 aa1.41□□□□□ -2.18
CCDC178-204ENST00000403303 C3orf79P0CE67 100 aa1.4□□□□□ -2.19
CCDC178-204ENST00000403303 SPATA8Q6RVD6 105 aa1.4□□□□□ -2.19
CCDC178-204ENST00000403303 SMR3BP02814 79 aaPredicted RBP1.39□□□□□ -2.19
CCDC178-204ENST00000403303 NREPQ16612 68 aa1.39□□□□□ -2.19
CCDC178-204ENST00000403303 C10orf95Q9H7T3 257 aa1.39□□□□□ -2.19
CCDC178-204ENST00000403303 COX8AP10176 69 aa1.38□□□□□ -2.19
CCDC178-204ENST00000403303 USH2AO75445 5202 aa1.38□□□□□ -2.19
CCDC178-204ENST00000403303 KRTAP12-4P60329 112 aa1.38□□□□□ -2.19
CCDC178-204ENST00000403303 KRTAP19-6Q3LI70 58 aa1.38□□□□□ -2.19
CCDC178-204ENST00000403303 TRBV7-4A0A0J9YYF1 115 aa1.37□□□□□ -2.19
CCDC178-204ENST00000403303 CLPSL2Q6UWE3 100 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms