RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 SVEP1Q4LDE5 3571 aa3.23□□□□□ -1.89
CHD8-201ENST00000399982 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
CHD8-201ENST00000399982 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
CHD8-201ENST00000399982 KRTAP4-5Q9BYR2 181 aa3.2□□□□□ -1.9
CHD8-201ENST00000399982 LCE3BQ5TA77 95 aa3.19□□□□□ -1.9
CHD8-201ENST00000399982 CSMD3Q7Z407 3707 aa3.19□□□□□ -1.9
CHD8-201ENST00000399982 FBN1P35555 2871 aaKnown RBP3.19□□□□□ -1.9
CHD8-201ENST00000399982 HUWE1Q7Z6Z7 4374 aaKnown RBP3.19□□□□□ -1.9
CHD8-201ENST00000399982 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
CHD8-201ENST00000399982 SPRR2EP22531 72 aa3.16□□□□□ -1.9
CHD8-201ENST00000399982 SPRR2BP35325 72 aa3.16□□□□□ -1.9
CHD8-201ENST00000399982 SPRR2AP35326 72 aa3.16□□□□□ -1.9
CHD8-201ENST00000399982 TRRAPQ9Y4A5 3859 aa3.15□□□□□ -1.91
CHD8-201ENST00000399982 CUBNO60494 3623 aa3.15□□□□□ -1.91
CHD8-201ENST00000399982 CSMD2Q7Z408 3487 aa3.13□□□□□ -1.91
CHD8-201ENST00000399982 DNAH2Q9P225 4427 aa3.06□□□□□ -1.92
CHD8-201ENST00000399982 SPRR2DP22532 72 aa3.05□□□□□ -1.92
CHD8-201ENST00000399982 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
CHD8-201ENST00000399982 CMYA5Q8N3K9 4069 aa3.04□□□□□ -1.92
CHD8-201ENST00000399982 DNAH11Q96DT5 4516 aa3.02□□□□□ -1.93
CHD8-201ENST00000399982 MT1HP80294 61 aa3.01□□□□□ -1.93
CHD8-201ENST00000399982 LCE2BO14633 110 aa3□□□□□ -1.93
CHD8-201ENST00000399982 MT2AP02795 61 aa3□□□□□ -1.93
CHD8-201ENST00000399982 ZNF469Q96JG9 3925 aaPredicted RBP2.99□□□□□ -1.93
CHD8-201ENST00000399982 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
CHD8-201ENST00000399982 MT1GP13640 62 aa2.97□□□□□ -1.93
CHD8-201ENST00000399982 ANK3Q12955 4377 aaKnown RBP2.94□□□□□ -1.94
CHD8-201ENST00000399982 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
CHD8-201ENST00000399982 HECTD4Q9Y4D8 3996 aa2.94□□□□□ -1.94
CHD8-201ENST00000399982 LYSTQ99698 3801 aa2.93□□□□□ -1.94
CHD8-201ENST00000399982 DNAH10Q8IVF4 4471 aa2.93□□□□□ -1.94
CHD8-201ENST00000399982 DNAH3Q8TD57 4116 aa2.93□□□□□ -1.94
CHD8-201ENST00000399982 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
CHD8-201ENST00000399982 MT3P25713 68 aa2.92□□□□□ -1.94
CHD8-201ENST00000399982 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.94
CHD8-201ENST00000399982 DNAH1Q9P2D7 4330 aa2.89□□□□□ -1.95
CHD8-201ENST00000399982 LCE2CQ5TA81 110 aa2.89□□□□□ -1.95
CHD8-201ENST00000399982 DNAH7Q8WXX0 4024 aa2.88□□□□□ -1.95
CHD8-201ENST00000399982 MT1FP04733 61 aa2.88□□□□□ -1.95
CHD8-201ENST00000399982 FRAS1Q86XX4 4008 aa2.87□□□□□ -1.95
CHD8-201ENST00000399982 KRTAP19-1Q8IUB9 90 aa2.84□□□□□ -1.96
CHD8-201ENST00000399982 LCE2DQ5TA82 110 aaPredicted RBP2.83□□□□□ -1.96
CHD8-201ENST00000399982 ANK2Q01484 3957 aa2.83□□□□□ -1.96
CHD8-201ENST00000399982 LRP1Q07954 4544 aaKnown RBP2.82□□□□□ -1.96
CHD8-201ENST00000399982 MT1XP80297 61 aa2.8□□□□□ -1.96
CHD8-201ENST00000399982 DNAH6Q9C0G6 4158 aa2.79□□□□□ -1.96
CHD8-201ENST00000399982 DNAH8Q96JB1 4490 aa2.79□□□□□ -1.96
CHD8-201ENST00000399982 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
CHD8-201ENST00000399982 VPS13BQ7Z7G8 4022 aa2.79□□□□□ -1.96
CHD8-201ENST00000399982 MT4P47944 62 aa2.79□□□□□ -1.96
CHD8-201ENST00000399982 DNAH5Q8TE73 4624 aa2.78□□□□□ -1.96
CHD8-201ENST00000399982 DNAH17Q9UFH2 4485 aa2.76□□□□□ -1.97
CHD8-201ENST00000399982 PRM1P04553 51 aa2.76□□□□□ -1.97
CHD8-201ENST00000399982 KMT2AQ03164 3969 aa2.76□□□□□ -1.97
CHD8-201ENST00000399982 MT1LQ93083 61 aa2.75□□□□□ -1.97
CHD8-201ENST00000399982 FAT1Q14517 4588 aa2.73□□□□□ -1.97
CHD8-201ENST00000399982 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
CHD8-201ENST00000399982 PLECQ15149 4684 aaKnown RBP2.71□□□□□ -1.98
CHD8-201ENST00000399982 DYNC1H1Q14204 4646 aaKnown RBP2.71□□□□□ -1.98
CHD8-201ENST00000399982 PRKDCP78527 4128 aaKnown RBP2.7□□□□□ -1.98
CHD8-201ENST00000399982 MT1BP07438 61 aa2.69□□□□□ -1.98
CHD8-201ENST00000399982 VPS13DQ5THJ4 4388 aa2.69□□□□□ -1.98
CHD8-201ENST00000399982 DNAH9Q9NYC9 4486 aa2.67□□□□□ -1.98
CHD8-201ENST00000399982 DYNC2H1Q8NCM8 4307 aaKnown RBP2.67□□□□□ -1.98
CHD8-201ENST00000399982 DNHD1Q96M86 4753 aa2.67□□□□□ -1.98
CHD8-201ENST00000399982 KRTAP4-8A0A0G2JLE6 195 aa2.65□□□□□ -1.99
CHD8-201ENST00000399982 MT1EP04732 61 aa2.65□□□□□ -1.99
CHD8-201ENST00000399982 KRTAP4-8Q9BYQ9 185 aa2.65□□□□□ -1.99
CHD8-201ENST00000399982 APOBP04114 4563 aaKnown RBP2.65□□□□□ -1.99
CHD8-201ENST00000399982 LCE5AQ5TCM9 118 aa2.64□□□□□ -1.99
CHD8-201ENST00000399982 SACSQ9NZJ4 4579 aa2.64□□□□□ -1.99
CHD8-201ENST00000399982 FAT2Q9NYQ8 4349 aa2.63□□□□□ -1.99
CHD8-201ENST00000399982 FLGP20930 4061 aaPredicted RBP2.62□□□□□ -1.99
CHD8-201ENST00000399982 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
CHD8-201ENST00000399982 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
CHD8-201ENST00000399982 HSPG2P98160 4391 aa2.59□□□□□ -1.99
CHD8-201ENST00000399982 KRTAP2-3P0C7H8 128 aa2.59□□□□□ -2
CHD8-201ENST00000399982 KRTAP2-4Q9BYR9 128 aa2.59□□□□□ -2
CHD8-201ENST00000399982 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -2
CHD8-201ENST00000399982 MYCBP2O75592 4640 aa2.58□□□□□ -2
CHD8-201ENST00000399982 KRTAP9-8Q9BYQ0 159 aa2.58□□□□□ -2
CHD8-201ENST00000399982 LCE1CQ5T751 118 aa2.57□□□□□ -2
CHD8-201ENST00000399982 LCE1EQ5T753 118 aa2.57□□□□□ -2
CHD8-201ENST00000399982 LCE1FQ5T754 118 aa2.57□□□□□ -2
CHD8-201ENST00000399982 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
CHD8-201ENST00000399982 KRTAP9-3Q9BYQ3 159 aa2.54□□□□□ -2
CHD8-201ENST00000399982 KRTAP17-1Q9BYP8 105 aa2.54□□□□□ -2
CHD8-201ENST00000399982 KRTAP4-7Q9BYR0 210 aa2.53□□□□□ -2
CHD8-201ENST00000399982 LRP1BQ9NZR2 4599 aa2.51□□□□□ -2.01
CHD8-201ENST00000399982 MT1AP04731 61 aa2.5□□□□□ -2.01
CHD8-201ENST00000399982 LCE2AQ5TA79 106 aaPredicted RBP2.49□□□□□ -2.01
CHD8-201ENST00000399982 LCE4AQ5TA78 99 aa2.48□□□□□ -2.01
CHD8-201ENST00000399982 LOC100996750A0A140TA64 210 aa2.48□□□□□ -2.01
CHD8-201ENST00000399982 HERC1Q15751 4861 aa2.47□□□□□ -2.01
CHD8-201ENST00000399982 MT1MQ8N339 61 aa2.46□□□□□ -2.01
CHD8-201ENST00000399982 PKHD1P08F94 4074 aa2.46□□□□□ -2.02
CHD8-201ENST00000399982 BIRC6Q9NR09 4857 aa2.45□□□□□ -2.02
CHD8-201ENST00000399982 PKD1P98161 4303 aa2.44□□□□□ -2.02
CHD8-201ENST00000399982 RYR1P21817 5038 aa2.41□□□□□ -2.02
CHD8-201ENST00000399982 STARD9Q9P2P6 4700 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms