RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 CUBNO60494 3623 aa8.84□□□□□ -0.99
ANKRD28-201ENST00000399451 KRTAP10-5P60370 271 aa8.82□□□□□ -1
ANKRD28-201ENST00000399451 VPS13CQ709C8 3753 aa8.74□□□□□ -1.01
ANKRD28-201ENST00000399451 DNAH9Q9NYC9 4486 aa8.72□□□□□ -1.01
ANKRD28-201ENST00000399451 MT1HP80294 61 aa8.65□□□□□ -1.03
ANKRD28-201ENST00000399451 DNAH1Q9P2D7 4330 aa8.62□□□□□ -1.03
ANKRD28-201ENST00000399451 DNAH2Q9P225 4427 aa8.61□□□□□ -1.03
ANKRD28-201ENST00000399451 AKAP9Q99996 3911 aa8.59□□□□□ -1.03
ANKRD28-201ENST00000399451 DNAH10Q8IVF4 4471 aa8.58□□□□□ -1.04
ANKRD28-201ENST00000399451 DNAH5Q8TE73 4624 aa8.58□□□□□ -1.04
ANKRD28-201ENST00000399451 KRTAP4-1Q9BYQ7 146 aa8.57□□□□□ -1.04
ANKRD28-201ENST00000399451 DNAH11Q96DT5 4516 aa8.45□□□□□ -1.06
ANKRD28-201ENST00000399451 CSMD3Q7Z407 3707 aa8.45□□□□□ -1.06
ANKRD28-201ENST00000399451 MT2AP02795 61 aa8.45□□□□□ -1.06
ANKRD28-201ENST00000399451 SPRR2FQ96RM1 72 aa8.45□□□□□ -1.06
ANKRD28-201ENST00000399451 DNAH17Q9UFH2 4485 aa8.41□□□□□ -1.06
ANKRD28-201ENST00000399451 SPRR2GQ9BYE4 73 aa8.4□□□□□ -1.06
ANKRD28-201ENST00000399451 KRTAP10-7P60409 375 aaPredicted RBP8.38□□□□□ -1.07
ANKRD28-201ENST00000399451 PLECQ15149 4684 aaKnown RBP8.37□□□□□ -1.07
ANKRD28-201ENST00000399451 VPS13DQ5THJ4 4388 aa8.32□□□□□ -1.08
ANKRD28-201ENST00000399451 DNAH3Q8TD57 4116 aa8.27□□□□□ -1.09
ANKRD28-201ENST00000399451 MT1FP04733 61 aa8.25□□□□□ -1.09
ANKRD28-201ENST00000399451 KRTAP19-5Q3LI72 72 aa8.19□□□□□ -1.1
ANKRD28-201ENST00000399451 DNAH8Q96JB1 4490 aa8.15□□□□□ -1.1
ANKRD28-201ENST00000399451 ZNF469Q96JG9 3925 aaPredicted RBP8.14□□□□□ -1.11
ANKRD28-201ENST00000399451 SACSQ9NZJ4 4579 aa8.13□□□□□ -1.11
ANKRD28-201ENST00000399451 LCE3CQ5T5A8 94 aa8.12□□□□□ -1.11
ANKRD28-201ENST00000399451 DYNC1H1Q14204 4646 aaKnown RBP8.1□□□□□ -1.11
ANKRD28-201ENST00000399451 FAT2Q9NYQ8 4349 aa8.1□□□□□ -1.11
ANKRD28-201ENST00000399451 DYNC2H1Q8NCM8 4307 aaKnown RBP8.1□□□□□ -1.11
ANKRD28-201ENST00000399451 LRP1BQ9NZR2 4599 aa8.09□□□□□ -1.11
ANKRD28-201ENST00000399451 SPRR2EP22531 72 aa8.04□□□□□ -1.12
ANKRD28-201ENST00000399451 SPRR2BP35325 72 aa8.04□□□□□ -1.12
ANKRD28-201ENST00000399451 SPRR2AP35326 72 aa8.04□□□□□ -1.12
ANKRD28-201ENST00000399451 FAT1Q14517 4588 aa8□□□□□ -1.13
ANKRD28-201ENST00000399451 STARD9Q9P2P6 4700 aa7.96□□□□□ -1.14
ANKRD28-201ENST00000399451 ANK2Q01484 3957 aa7.92□□□□□ -1.14
ANKRD28-201ENST00000399451 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
ANKRD28-201ENST00000399451 APOBP04114 4563 aaKnown RBP7.78□□□□□ -1.16
ANKRD28-201ENST00000399451 SPRR2DP22532 72 aa7.78□□□□□ -1.16
ANKRD28-201ENST00000399451 PRKDCP78527 4128 aaKnown RBP7.75□□□□□ -1.17
ANKRD28-201ENST00000399451 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
ANKRD28-201ENST00000399451 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
ANKRD28-201ENST00000399451 VPS13BQ7Z7G8 4022 aa7.74□□□□□ -1.17
ANKRD28-201ENST00000399451 CMYA5Q8N3K9 4069 aa7.73□□□□□ -1.17
ANKRD28-201ENST00000399451 RYR1P21817 5038 aa7.72□□□□□ -1.17
ANKRD28-201ENST00000399451 DNAH7Q8WXX0 4024 aa7.72□□□□□ -1.17
ANKRD28-201ENST00000399451 DNHD1Q96M86 4753 aa7.7□□□□□ -1.18
ANKRD28-201ENST00000399451 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
ANKRD28-201ENST00000399451 LCE2BO14633 110 aa7.66□□□□□ -1.18
ANKRD28-201ENST00000399451 KMT2AQ03164 3969 aa7.65□□□□□ -1.19
ANKRD28-201ENST00000399451 LCE3BQ5TA77 95 aa7.64□□□□□ -1.19
ANKRD28-201ENST00000399451 MT1XP80297 61 aa7.6□□□□□ -1.19
ANKRD28-201ENST00000399451 FRAS1Q86XX4 4008 aa7.55□□□□□ -1.2
ANKRD28-201ENST00000399451 FAT3Q8TDW7 4589 aa7.54□□□□□ -1.2
ANKRD28-201ENST00000399451 MT1GP13640 62 aa7.52□□□□□ -1.21
ANKRD28-201ENST00000399451 KRTAP12-4P60329 112 aa7.52□□□□□ -1.21
ANKRD28-201ENST00000399451 KRTAP17-1Q9BYP8 105 aa7.48□□□□□ -1.21
ANKRD28-201ENST00000399451 RYR3Q15413 4870 aa7.47□□□□□ -1.21
ANKRD28-201ENST00000399451 MT1BP07438 61 aa7.46□□□□□ -1.21
ANKRD28-201ENST00000399451 LRP1Q07954 4544 aaKnown RBP7.45□□□□□ -1.22
ANKRD28-201ENST00000399451 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
ANKRD28-201ENST00000399451 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
ANKRD28-201ENST00000399451 LYSTQ99698 3801 aa7.34□□□□□ -1.23
ANKRD28-201ENST00000399451 HECTD4Q9Y4D8 3996 aa7.33□□□□□ -1.24
ANKRD28-201ENST00000399451 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
ANKRD28-201ENST00000399451 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
ANKRD28-201ENST00000399451 HERC1Q15751 4861 aa7.31□□□□□ -1.24
ANKRD28-201ENST00000399451 HSPG2P98160 4391 aa7.27□□□□□ -1.25
ANKRD28-201ENST00000399451 RYR2Q92736 4967 aa7.24□□□□□ -1.25
ANKRD28-201ENST00000399451 MYCBP2O75592 4640 aa7.22□□□□□ -1.25
ANKRD28-201ENST00000399451 KRTAP9-3Q9BYQ3 159 aa7.22□□□□□ -1.25
ANKRD28-201ENST00000399451 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
ANKRD28-201ENST00000399451 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
ANKRD28-201ENST00000399451 LCE3DQ9BYE3 92 aa7.11□□□□□ -1.27
ANKRD28-201ENST00000399451 PKHD1L1Q86WI1 4243 aa7.08□□□□□ -1.28
ANKRD28-201ENST00000399451 PKD1P98161 4303 aa7.03□□□□□ -1.28
ANKRD28-201ENST00000399451 KRTAP19-3Q7Z4W3 81 aa7.02□□□□□ -1.29
ANKRD28-201ENST00000399451 LCE3EQ5T5B0 92 aa7.01□□□□□ -1.29
ANKRD28-201ENST00000399451 KIAA1109Q2LD37 5005 aa6.96□□□□□ -1.3
ANKRD28-201ENST00000399451 MT1LQ93083 61 aa6.92□□□□□ -1.3
ANKRD28-201ENST00000399451 MT4P47944 62 aa6.91□□□□□ -1.3
ANKRD28-201ENST00000399451 KRTAP4-7Q9BYR0 210 aa6.89□□□□□ -1.31
ANKRD28-201ENST00000399451 MT1EP04732 61 aa6.85□□□□□ -1.31
ANKRD28-201ENST00000399451 KRTAP9-2Q9BYQ4 174 aa6.84□□□□□ -1.31
ANKRD28-201ENST00000399451 LPAP08519 4548 aa6.79□□□□□ -1.32
ANKRD28-201ENST00000399451 KRTAP19-2Q3LHN2 52 aa6.79□□□□□ -1.32
ANKRD28-201ENST00000399451 LRP2P98164 4655 aa6.75□□□□□ -1.33
ANKRD28-201ENST00000399451 HYDINQ4G0P3 5121 aa6.75□□□□□ -1.33
ANKRD28-201ENST00000399451 TNXBP22105 4242 aa6.73□□□□□ -1.33
ANKRD28-201ENST00000399451 HERC2O95714 4834 aa6.69□□□□□ -1.34
ANKRD28-201ENST00000399451 MT3P25713 68 aa6.67□□□□□ -1.34
ANKRD28-201ENST00000399451 BIRC6Q9NR09 4857 aa6.66□□□□□ -1.34
ANKRD28-201ENST00000399451 MT1MQ8N339 61 aa6.64□□□□□ -1.35
ANKRD28-201ENST00000399451 KRTAP19-6Q3LI70 58 aa6.63□□□□□ -1.35
ANKRD28-201ENST00000399451 PKHD1P08F94 4074 aa6.62□□□□□ -1.35
ANKRD28-201ENST00000399451 MUC17Q685J3 4493 aa6.6□□□□□ -1.35
ANKRD28-201ENST00000399451 FLGP20930 4061 aaPredicted RBP6.58□□□□□ -1.36
ANKRD28-201ENST00000399451 LCE1BQ5T7P3 118 aa6.58□□□□□ -1.36
ANKRD28-201ENST00000399451 PCLOQ9Y6V0 5065 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms