RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 CELSR3Q9NYQ7 3312 aa1□□□□□ -2.25
CEP290-202ENST00000397838 OTOGQ6ZRI0 2925 aa1□□□□□ -2.25
CEP290-202ENST00000397838 FAM186AA6NE01 2351 aa0.99□□□□□ -2.25
CEP290-202ENST00000397838 SPINK1P00995 79 aa0.98□□□□□ -2.25
CEP290-202ENST00000397838 CD52P31358 61 aa0.98□□□□□ -2.25
CEP290-202ENST00000397838 DEFB1P60022 68 aa0.98□□□□□ -2.25
CEP290-202ENST00000397838 PRRC2CQ9Y520 2896 aaKnown RBP0.97□□□□□ -2.25
CEP290-202ENST00000397838 HTN1P15515 57 aa0.97□□□□□ -2.25
CEP290-202ENST00000397838 LINC01556Q5JQF7 62 aa0.97□□□□□ -2.25
CEP290-202ENST00000397838 COL7A1Q02388 2944 aa0.97□□□□□ -2.25
CEP290-202ENST00000397838 RPS29P62273 56 aaKnown RBP0.97□□□□□ -2.25
CEP290-202ENST00000397838 SPINK6Q6UWN8 80 aa0.97□□□□□ -2.25
CEP290-202ENST00000397838 AKAP6Q13023 2319 aa0.96□□□□□ -2.26
CEP290-202ENST00000397838 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.96□□□□□ -2.26
CEP290-202ENST00000397838 KNL1Q8NG31 2342 aa0.96□□□□□ -2.26
CEP290-202ENST00000397838 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.26
CEP290-202ENST00000397838 C9orf92A6NGG3 77 aa0.95□□□□□ -2.26
CEP290-202ENST00000397838 ACANP16112 2415 aa0.94□□□□□ -2.26
CEP290-202ENST00000397838 BOD1L1Q8NFC6 3051 aa0.94□□□□□ -2.26
CEP290-202ENST00000397838 WNK1Q9H4A3 2382 aa0.94□□□□□ -2.26
CEP290-202ENST00000397838 TNP1P09430 55 aa0.93□□□□□ -2.26
CEP290-202ENST00000397838 SPART-AS1P0CW21 52 aa0.93□□□□□ -2.26
CEP290-202ENST00000397838 EYSQ5T1H1 3165 aa0.92□□□□□ -2.26
CEP290-202ENST00000397838 DNAH12Q6ZR08 3092 aa0.92□□□□□ -2.26
CEP290-202ENST00000397838 A0A096LPF7 62 aa0.91□□□□□ -2.26
CEP290-202ENST00000397838 WNK2Q9Y3S1 2297 aa0.91□□□□□ -2.26
CEP290-202ENST00000397838 HIVEP1P15822 2718 aa0.91□□□□□ -2.26
CEP290-202ENST00000397838 DYNC2H1Q8NCM8 4307 aaKnown RBP0.91□□□□□ -2.26
CEP290-202ENST00000397838 DEFB136Q30KP8 78 aa0.91□□□□□ -2.26
CEP290-202ENST00000397838 MUC12Q9UKN1 5478 aa0.91□□□□□ -2.26
CEP290-202ENST00000397838 RANBP2P49792 3224 aaKnown RBP0.89□□□□□ -2.27
CEP290-202ENST00000397838 KRTAP19-6Q3LI70 58 aa0.89□□□□□ -2.27
CEP290-202ENST00000397838 DNAH1Q9P2D7 4330 aa0.89□□□□□ -2.27
CEP290-202ENST00000397838 DEFB133Q30KQ1 61 aa0.89□□□□□ -2.27
CEP290-202ENST00000397838 TGP01266 2768 aa0.88□□□□□ -2.27
CEP290-202ENST00000397838 DEFB135Q30KP9 77 aa0.88□□□□□ -2.27
CEP290-202ENST00000397838 VPS13DQ5THJ4 4388 aa0.87□□□□□ -2.27
CEP290-202ENST00000397838 A0A096LNI7 61 aa0.87□□□□□ -2.27
CEP290-202ENST00000397838 PKDREJQ9NTG1 2253 aa0.87□□□□□ -2.27
CEP290-202ENST00000397838 CELSR1Q9NYQ6 3014 aa0.87□□□□□ -2.27
CEP290-202ENST00000397838 REV3LO60673 3130 aa0.87□□□□□ -2.27
CEP290-202ENST00000397838 DSPP15924 2871 aaKnown RBP0.87□□□□□ -2.27
CEP290-202ENST00000397838 U3KQA8 63 aa0.85□□□□□ -2.27
CEP290-202ENST00000397838 LRP1Q07954 4544 aaKnown RBP0.85□□□□□ -2.27
CEP290-202ENST00000397838 PRKDCP78527 4128 aaKnown RBP0.85□□□□□ -2.27
CEP290-202ENST00000397838 M0R2T5 61 aa0.85□□□□□ -2.27
CEP290-202ENST00000397838 HUWE1Q7Z6Z7 4374 aaKnown RBP0.83□□□□□ -2.28
CEP290-202ENST00000397838 APC2O95996 2303 aa0.83□□□□□ -2.28
CEP290-202ENST00000397838 MAP1AP78559 2803 aaPredicted RBP0.83□□□□□ -2.28
CEP290-202ENST00000397838 SACSQ9NZJ4 4579 aa0.83□□□□□ -2.28
CEP290-202ENST00000397838 ACACAQ13085 2346 aa0.83□□□□□ -2.28
CEP290-202ENST00000397838 LAMA2P24043 3122 aaKnown RBP0.83□□□□□ -2.28
CEP290-202ENST00000397838 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
CEP290-202ENST00000397838 CSPG4Q6UVK1 2322 aa0.81□□□□□ -2.28
CEP290-202ENST00000397838 ITPR2Q14571 2701 aa0.81□□□□□ -2.28
CEP290-202ENST00000397838 CFAP47Q6ZTR5 3102 aa0.8□□□□□ -2.28
CEP290-202ENST00000397838 KRTAP8-1Q8IUC2 63 aa0.8□□□□□ -2.28
CEP290-202ENST00000397838 NBASA2RRP1 2371 aa0.78□□□□□ -2.28
CEP290-202ENST00000397838 HTN3P15516 51 aa0.77□□□□□ -2.29
CEP290-202ENST00000397838 PKHD1L1Q86WI1 4243 aa0.76□□□□□ -2.29
CEP290-202ENST00000397838 A0A0C4DFX4 3053 aa0.75□□□□□ -2.29
CEP290-202ENST00000397838 NIPBLQ6KC79 2804 aaeCLIP0.75□□□□□ -2.29
CEP290-202ENST00000397838 PKD1P98161 4303 aa0.75□□□□□ -2.29
CEP290-202ENST00000397838 SPRR2DP22532 72 aa0.75□□□□□ -2.29
CEP290-202ENST00000397838 WDR87Q6ZQQ6 2873 aa0.74□□□□□ -2.29
CEP290-202ENST00000397838 DYNC1H1Q14204 4646 aaKnown RBP0.74□□□□□ -2.29
CEP290-202ENST00000397838 DNAH11Q96DT5 4516 aa0.74□□□□□ -2.29
CEP290-202ENST00000397838 FLGP20930 4061 aaPredicted RBP0.74□□□□□ -2.29
CEP290-202ENST00000397838 DNAH3Q8TD57 4116 aa0.74□□□□□ -2.29
CEP290-202ENST00000397838 DNAH2Q9P225 4427 aa0.73□□□□□ -2.29
CEP290-202ENST00000397838 VPS13BQ7Z7G8 4022 aa0.73□□□□□ -2.29
CEP290-202ENST00000397838 ANK3Q12955 4377 aaKnown RBP0.73□□□□□ -2.29
CEP290-202ENST00000397838 AKAP9Q99996 3911 aa0.73□□□□□ -2.29
CEP290-202ENST00000397838 SPTBN5Q9NRC6 3674 aaKnown RBP0.73□□□□□ -2.29
CEP290-202ENST00000397838 PKHD1P08F94 4074 aa0.72□□□□□ -2.29
CEP290-202ENST00000397838 CMYA5Q8N3K9 4069 aa0.72□□□□□ -2.29
CEP290-202ENST00000397838 HECTD4Q9Y4D8 3996 aa0.7□□□□□ -2.3
CEP290-202ENST00000397838 SPRR2EP22531 72 aa0.7□□□□□ -2.3
CEP290-202ENST00000397838 SPRR2BP35325 72 aa0.7□□□□□ -2.3
CEP290-202ENST00000397838 SPRR2AP35326 72 aa0.7□□□□□ -2.3
CEP290-202ENST00000397838 DNAH10Q8IVF4 4471 aa0.7□□□□□ -2.3
CEP290-202ENST00000397838 DEFB4AO15263 64 aa0.69□□□□□ -2.3
CEP290-202ENST00000397838 MT1AP04731 61 aa0.69□□□□□ -2.3
CEP290-202ENST00000397838 CHD7Q9P2D1 2997 aa0.69□□□□□ -2.3
CEP290-202ENST00000397838 DNAH5Q8TE73 4624 aa0.68□□□□□ -2.3
CEP290-202ENST00000397838 SMR3BP02814 79 aaPredicted RBP0.68□□□□□ -2.3
CEP290-202ENST00000397838 PLECQ15149 4684 aaKnown RBP0.68□□□□□ -2.3
CEP290-202ENST00000397838 RELNP78509 3460 aa0.67□□□□□ -2.3
CEP290-202ENST00000397838 DNAH6Q9C0G6 4158 aa0.66□□□□□ -2.3
CEP290-202ENST00000397838 TNXBP22105 4242 aa0.66□□□□□ -2.3
CEP290-202ENST00000397838 FAT2Q9NYQ8 4349 aa0.66□□□□□ -2.3
CEP290-202ENST00000397838 KRTAP19-5Q3LI72 72 aa0.65□□□□□ -2.31
CEP290-202ENST00000397838 LRBAP50851 2863 aa0.64□□□□□ -2.31
CEP290-202ENST00000397838 DNAH8Q96JB1 4490 aa0.64□□□□□ -2.31
CEP290-202ENST00000397838 PRM1P04553 51 aa0.63□□□□□ -2.31
CEP290-202ENST00000397838 VPS13CQ709C8 3753 aa0.63□□□□□ -2.31
CEP290-202ENST00000397838 NBEAQ8NFP9 2946 aa0.63□□□□□ -2.31
CEP290-202ENST00000397838 LYSTQ99698 3801 aa0.63□□□□□ -2.31
CEP290-202ENST00000397838 HRNRQ86YZ3 2850 aaPredicted RBP0.63□□□□□ -2.31
CEP290-202ENST00000397838 SRRM2Q9UQ35 2752 aaKnown RBP0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms