RNA–Protein interactions for RNA: ENST00000396872.7

SLC29A4-202, Transcript of solute carrier family 29 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC29A4, Length 5,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-202ENST00000396872 KRTAP12-3P60328 96 aa7.98□□□□□ -1.13
SLC29A4-202ENST00000396872 CRCT1Q9UGL9 99 aa7.92□□□□□ -1.14
SLC29A4-202ENST00000396872 DNAH9Q9NYC9 4486 aa7.91□□□□□ -1.14
SLC29A4-202ENST00000396872 DNAH10Q8IVF4 4471 aa7.91□□□□□ -1.14
SLC29A4-202ENST00000396872 DNAH5Q8TE73 4624 aa7.9□□□□□ -1.14
SLC29A4-202ENST00000396872 DNAH1Q9P2D7 4330 aa7.89□□□□□ -1.15
SLC29A4-202ENST00000396872 KRTAP23-1A1A580 65 aa7.89□□□□□ -1.15
SLC29A4-202ENST00000396872 DNAH11Q96DT5 4516 aa7.86□□□□□ -1.15
SLC29A4-202ENST00000396872 PLECQ15149 4684 aaKnown RBP7.85□□□□□ -1.15
SLC29A4-202ENST00000396872 DNAH2Q9P225 4427 aa7.69□□□□□ -1.18
SLC29A4-202ENST00000396872 ALMS1Q8TCU4 4167 aa7.68□□□□□ -1.18
SLC29A4-202ENST00000396872 DNAH8Q96JB1 4490 aa7.64□□□□□ -1.19
SLC29A4-202ENST00000396872 DNAH17Q9UFH2 4485 aa7.63□□□□□ -1.19
SLC29A4-202ENST00000396872 FAT1Q14517 4588 aa7.62□□□□□ -1.19
SLC29A4-202ENST00000396872 KRTAP4-1Q9BYQ7 146 aa7.58□□□□□ -1.2
SLC29A4-202ENST00000396872 DNHD1Q96M86 4753 aa7.58□□□□□ -1.2
SLC29A4-202ENST00000396872 STARD9Q9P2P6 4700 aa7.57□□□□□ -1.2
SLC29A4-202ENST00000396872 VPS13DQ5THJ4 4388 aa7.56□□□□□ -1.2
SLC29A4-202ENST00000396872 LRP1BQ9NZR2 4599 aa7.46□□□□□ -1.22
SLC29A4-202ENST00000396872 DYNC1H1Q14204 4646 aaKnown RBP7.45□□□□□ -1.22
SLC29A4-202ENST00000396872 KRTAP10-5P60370 271 aa7.44□□□□□ -1.22
SLC29A4-202ENST00000396872 ANK2Q01484 3957 aa7.43□□□□□ -1.22
SLC29A4-202ENST00000396872 KMT2AQ03164 3969 aa7.42□□□□□ -1.22
SLC29A4-202ENST00000396872 PRKDCP78527 4128 aaKnown RBP7.41□□□□□ -1.22
SLC29A4-202ENST00000396872 DNAH3Q8TD57 4116 aa7.35□□□□□ -1.23
SLC29A4-202ENST00000396872 SACSQ9NZJ4 4579 aa7.35□□□□□ -1.23
SLC29A4-202ENST00000396872 LYSTQ99698 3801 aa7.33□□□□□ -1.24
SLC29A4-202ENST00000396872 FRAS1Q86XX4 4008 aa7.29□□□□□ -1.24
SLC29A4-202ENST00000396872 RYR1P21817 5038 aa7.27□□□□□ -1.25
SLC29A4-202ENST00000396872 APOBP04114 4563 aaKnown RBP7.26□□□□□ -1.25
SLC29A4-202ENST00000396872 MYCBP2O75592 4640 aa7.26□□□□□ -1.25
SLC29A4-202ENST00000396872 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
SLC29A4-202ENST00000396872 VPS13BQ7Z7G8 4022 aa7.23□□□□□ -1.25
SLC29A4-202ENST00000396872 MT1HP80294 61 aa7.23□□□□□ -1.25
SLC29A4-202ENST00000396872 DYNC2H1Q8NCM8 4307 aaKnown RBP7.22□□□□□ -1.25
SLC29A4-202ENST00000396872 MT2AP02795 61 aa7.22□□□□□ -1.25
SLC29A4-202ENST00000396872 KRTAP8-1Q8IUC2 63 aa7.21□□□□□ -1.26
SLC29A4-202ENST00000396872 CMYA5Q8N3K9 4069 aa7.19□□□□□ -1.26
SLC29A4-202ENST00000396872 FAT2Q9NYQ8 4349 aa7.18□□□□□ -1.26
SLC29A4-202ENST00000396872 MT1FP04733 61 aa7.12□□□□□ -1.27
SLC29A4-202ENST00000396872 DNAH7Q8WXX0 4024 aa7.12□□□□□ -1.27
SLC29A4-202ENST00000396872 DNAH6Q9C0G6 4158 aa7.11□□□□□ -1.27
SLC29A4-202ENST00000396872 KRTAP19-5Q3LI72 72 aa7.1□□□□□ -1.27
SLC29A4-202ENST00000396872 HECTD4Q9Y4D8 3996 aa7.04□□□□□ -1.28
SLC29A4-202ENST00000396872 LCE3CQ5T5A8 94 aa7.03□□□□□ -1.28
SLC29A4-202ENST00000396872 KIAA1109Q2LD37 5005 aa6.96□□□□□ -1.29
SLC29A4-202ENST00000396872 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
SLC29A4-202ENST00000396872 FAT3Q8TDW7 4589 aa6.92□□□□□ -1.3
SLC29A4-202ENST00000396872 KRTAP10-7P60409 375 aaPredicted RBP6.86□□□□□ -1.31
SLC29A4-202ENST00000396872 KRTAP19-1Q8IUB9 90 aa6.85□□□□□ -1.31
SLC29A4-202ENST00000396872 KRTAP17-1Q9BYP8 105 aa6.83□□□□□ -1.32
SLC29A4-202ENST00000396872 HYDINQ4G0P3 5121 aa6.83□□□□□ -1.32
SLC29A4-202ENST00000396872 RYR3Q15413 4870 aa6.81□□□□□ -1.32
SLC29A4-202ENST00000396872 PKHD1P08F94 4074 aa6.75□□□□□ -1.33
SLC29A4-202ENST00000396872 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
SLC29A4-202ENST00000396872 KRTAP19-8Q3LI54 63 aa6.68□□□□□ -1.34
SLC29A4-202ENST00000396872 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
SLC29A4-202ENST00000396872 MT1XP80297 61 aa6.67□□□□□ -1.34
SLC29A4-202ENST00000396872 LRP2P98164 4655 aa6.66□□□□□ -1.34
SLC29A4-202ENST00000396872 RYR2Q92736 4967 aa6.66□□□□□ -1.34
SLC29A4-202ENST00000396872 MT1BP07438 61 aa6.55□□□□□ -1.36
SLC29A4-202ENST00000396872 HERC2O95714 4834 aa6.53□□□□□ -1.36
SLC29A4-202ENST00000396872 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
SLC29A4-202ENST00000396872 LCE3BQ5TA77 95 aa6.5□□□□□ -1.37
SLC29A4-202ENST00000396872 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
SLC29A4-202ENST00000396872 PKD1P98161 4303 aa6.49□□□□□ -1.37
SLC29A4-202ENST00000396872 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
SLC29A4-202ENST00000396872 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
SLC29A4-202ENST00000396872 HSPG2P98160 4391 aa6.48□□□□□ -1.37
SLC29A4-202ENST00000396872 BIRC6Q9NR09 4857 aa6.45□□□□□ -1.38
SLC29A4-202ENST00000396872 MT1GP13640 62 aa6.45□□□□□ -1.38
SLC29A4-202ENST00000396872 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
SLC29A4-202ENST00000396872 LPAP08519 4548 aa6.43□□□□□ -1.38
SLC29A4-202ENST00000396872 KMT2CQ8NEZ4 4911 aaKnown RBP6.42□□□□□ -1.38
SLC29A4-202ENST00000396872 LCE2CQ5TA81 110 aa6.35□□□□□ -1.39
SLC29A4-202ENST00000396872 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
SLC29A4-202ENST00000396872 KRTAP9-3Q9BYQ3 159 aa6.25□□□□□ -1.41
SLC29A4-202ENST00000396872 TNXBP22105 4242 aa6.23□□□□□ -1.41
SLC29A4-202ENST00000396872 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.41
SLC29A4-202ENST00000396872 PCLOQ9Y6V0 5065 aa6.2□□□□□ -1.42
SLC29A4-202ENST00000396872 HERC1Q15751 4861 aa6.18□□□□□ -1.42
SLC29A4-202ENST00000396872 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
SLC29A4-202ENST00000396872 LCE3DQ9BYE3 92 aa6.12□□□□□ -1.43
SLC29A4-202ENST00000396872 SPRR2EP22531 72 aa6.1□□□□□ -1.43
SLC29A4-202ENST00000396872 SPRR2BP35325 72 aa6.1□□□□□ -1.43
SLC29A4-202ENST00000396872 SPRR2AP35326 72 aa6.1□□□□□ -1.43
SLC29A4-202ENST00000396872 MUC17Q685J3 4493 aa6.09□□□□□ -1.44
SLC29A4-202ENST00000396872 MT1LQ93083 61 aa6.03□□□□□ -1.44
SLC29A4-202ENST00000396872 LCE3EQ5T5B0 92 aa6.03□□□□□ -1.44
SLC29A4-202ENST00000396872 EPPK1P58107 5090 aaKnown RBP6□□□□□ -1.45
SLC29A4-202ENST00000396872 FLGP20930 4061 aaPredicted RBP5.99□□□□□ -1.45
SLC29A4-202ENST00000396872 LCE2BO14633 110 aa5.98□□□□□ -1.45
SLC29A4-202ENST00000396872 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
SLC29A4-202ENST00000396872 MT1EP04732 61 aa5.94□□□□□ -1.46
SLC29A4-202ENST00000396872 KRTAP19-3Q7Z4W3 81 aa5.92□□□□□ -1.46
SLC29A4-202ENST00000396872 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
SLC29A4-202ENST00000396872 SPRR2DP22532 72 aa5.87□□□□□ -1.47
SLC29A4-202ENST00000396872 LOC100996750A0A140TA64 210 aa5.86□□□□□ -1.47
SLC29A4-202ENST00000396872 UBR4Q5T4S7 5183 aa5.79□□□□□ -1.48
SLC29A4-202ENST00000396872 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms