RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
GNE-202ENST00000396594 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
GNE-202ENST00000396594 DYNC2H1Q8NCM8 4307 aaKnown RBP5.99□□□□□ -1.45
GNE-202ENST00000396594 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
GNE-202ENST00000396594 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
GNE-202ENST00000396594 MYCBP2O75592 4640 aa5.98□□□□□ -1.45
GNE-202ENST00000396594 DCHS1Q96JQ0 3298 aa5.98□□□□□ -1.45
GNE-202ENST00000396594 WDFY3Q8IZQ1 3526 aa5.98□□□□□ -1.45
GNE-202ENST00000396594 LCE2BO14633 110 aa5.97□□□□□ -1.45
GNE-202ENST00000396594 HSPG2P98160 4391 aa5.97□□□□□ -1.45
GNE-202ENST00000396594 CUBNO60494 3623 aa5.96□□□□□ -1.45
GNE-202ENST00000396594 RELNP78509 3460 aa5.96□□□□□ -1.46
GNE-202ENST00000396594 LCE3CQ5T5A8 94 aa5.94□□□□□ -1.46
GNE-202ENST00000396594 SACSQ9NZJ4 4579 aa5.93□□□□□ -1.46
GNE-202ENST00000396594 DNAH8Q96JB1 4490 aa5.92□□□□□ -1.46
GNE-202ENST00000396594 TRRAPQ9Y4A5 3859 aa5.91□□□□□ -1.46
GNE-202ENST00000396594 DNAH3Q8TD57 4116 aa5.89□□□□□ -1.47
GNE-202ENST00000396594 LRP1BQ9NZR2 4599 aa5.89□□□□□ -1.47
GNE-202ENST00000396594 FAT2Q9NYQ8 4349 aa5.89□□□□□ -1.47
GNE-202ENST00000396594 KRTAP19-5Q3LI72 72 aa5.88□□□□□ -1.47
GNE-202ENST00000396594 SRRM2Q9UQ35 2752 aaKnown RBP5.88□□□□□ -1.47
GNE-202ENST00000396594 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
GNE-202ENST00000396594 ZFHX3Q15911 3703 aa5.76□□□□□ -1.49
GNE-202ENST00000396594 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
GNE-202ENST00000396594 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
GNE-202ENST00000396594 MYO15AQ9UKN7 3530 aa5.73□□□□□ -1.49
GNE-202ENST00000396594 BSNQ9UPA5 3926 aa5.7□□□□□ -1.5
GNE-202ENST00000396594 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
GNE-202ENST00000396594 ZFHX4Q86UP3 3567 aa5.67□□□□□ -1.5
GNE-202ENST00000396594 ASPMQ8IZT6 3477 aa5.66□□□□□ -1.5
GNE-202ENST00000396594 CMYA5Q8N3K9 4069 aa5.66□□□□□ -1.5
GNE-202ENST00000396594 AKAP9Q99996 3911 aa5.64□□□□□ -1.51
GNE-202ENST00000396594 MT1XP80297 61 aa5.61□□□□□ -1.51
GNE-202ENST00000396594 MT1GP13640 62 aa5.61□□□□□ -1.51
GNE-202ENST00000396594 RYR2Q92736 4967 aa5.6□□□□□ -1.51
GNE-202ENST00000396594 SPRR2EP22531 72 aa5.6□□□□□ -1.51
GNE-202ENST00000396594 SPRR2BP35325 72 aa5.6□□□□□ -1.51
GNE-202ENST00000396594 SPRR2AP35326 72 aa5.6□□□□□ -1.51
GNE-202ENST00000396594 MT1BP07438 61 aa5.59□□□□□ -1.51
GNE-202ENST00000396594 FAT3Q8TDW7 4589 aa5.58□□□□□ -1.52
GNE-202ENST00000396594 FAT1Q14517 4588 aa5.58□□□□□ -1.52
GNE-202ENST00000396594 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
GNE-202ENST00000396594 LCE2CQ5TA81 110 aa5.57□□□□□ -1.52
GNE-202ENST00000396594 SVEP1Q4LDE5 3571 aa5.56□□□□□ -1.52
GNE-202ENST00000396594 DNAH7Q8WXX0 4024 aa5.55□□□□□ -1.52
GNE-202ENST00000396594 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
GNE-202ENST00000396594 ANK2Q01484 3957 aa5.51□□□□□ -1.53
GNE-202ENST00000396594 RYR1P21817 5038 aa5.51□□□□□ -1.53
GNE-202ENST00000396594 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
GNE-202ENST00000396594 PRKDCP78527 4128 aaKnown RBP5.49□□□□□ -1.53
GNE-202ENST00000396594 STARD9Q9P2P6 4700 aa5.49□□□□□ -1.53
GNE-202ENST00000396594 KRTAP12-4P60329 112 aa5.49□□□□□ -1.53
GNE-202ENST00000396594 LAMA5O15230 3695 aa5.48□□□□□ -1.53
GNE-202ENST00000396594 SPRR2DP22532 72 aa5.47□□□□□ -1.53
GNE-202ENST00000396594 RYR3Q15413 4870 aa5.44□□□□□ -1.54
GNE-202ENST00000396594 DNHD1Q96M86 4753 aa5.43□□□□□ -1.54
GNE-202ENST00000396594 CSMD1Q96PZ7 3565 aa5.43□□□□□ -1.54
GNE-202ENST00000396594 FRAS1Q86XX4 4008 aa5.42□□□□□ -1.54
GNE-202ENST00000396594 SPENQ96T58 3664 aaKnown RBP5.42□□□□□ -1.54
GNE-202ENST00000396594 CSMD2Q7Z408 3487 aa5.4□□□□□ -1.55
GNE-202ENST00000396594 LCE2AQ5TA79 106 aaPredicted RBP5.39□□□□□ -1.55
GNE-202ENST00000396594 SMG1Q96Q15 3661 aaKnown RBP5.38□□□□□ -1.55
GNE-202ENST00000396594 BIRC6Q9NR09 4857 aa5.35□□□□□ -1.55
GNE-202ENST00000396594 PKHD1L1Q86WI1 4243 aa5.35□□□□□ -1.55
GNE-202ENST00000396594 DMDP11532 3685 aa5.34□□□□□ -1.55
GNE-202ENST00000396594 KRTAP17-1Q9BYP8 105 aa5.33□□□□□ -1.56
GNE-202ENST00000396594 MUC3AQ02505 3323 aa5.31□□□□□ -1.56
GNE-202ENST00000396594 MT1LQ93083 61 aa5.3□□□□□ -1.56
GNE-202ENST00000396594 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
GNE-202ENST00000396594 VPS13CQ709C8 3753 aa5.25□□□□□ -1.57
GNE-202ENST00000396594 PKD1P98161 4303 aa5.24□□□□□ -1.57
GNE-202ENST00000396594 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
GNE-202ENST00000396594 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
GNE-202ENST00000396594 KRTAP19-2Q3LHN2 52 aa5.2□□□□□ -1.58
GNE-202ENST00000396594 ZNF469Q96JG9 3925 aaPredicted RBP5.2□□□□□ -1.58
GNE-202ENST00000396594 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
GNE-202ENST00000396594 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
GNE-202ENST00000396594 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
GNE-202ENST00000396594 MT1EP04732 61 aa5.15□□□□□ -1.59
GNE-202ENST00000396594 LCE3EQ5T5B0 92 aa5.14□□□□□ -1.59
GNE-202ENST00000396594 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
GNE-202ENST00000396594 PCLOQ9Y6V0 5065 aa5.07□□□□□ -1.6
GNE-202ENST00000396594 HERC2O95714 4834 aa5.05□□□□□ -1.6
GNE-202ENST00000396594 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
GNE-202ENST00000396594 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
GNE-202ENST00000396594 MT3P25713 68 aa5.02□□□□□ -1.61
GNE-202ENST00000396594 KIAA1109Q2LD37 5005 aa5.02□□□□□ -1.61
GNE-202ENST00000396594 MT1MQ8N339 61 aa4.98□□□□□ -1.61
GNE-202ENST00000396594 KMT2AQ03164 3969 aa4.97□□□□□ -1.61
GNE-202ENST00000396594 PKHD1P08F94 4074 aa4.92□□□□□ -1.62
GNE-202ENST00000396594 LRP2P98164 4655 aa4.91□□□□□ -1.62
GNE-202ENST00000396594 KMT2CQ8NEZ4 4911 aaKnown RBP4.89□□□□□ -1.63
GNE-202ENST00000396594 LCE1AQ5T7P2 110 aa4.85□□□□□ -1.63
GNE-202ENST00000396594 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
GNE-202ENST00000396594 CSMD3Q7Z407 3707 aa4.8□□□□□ -1.64
GNE-202ENST00000396594 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
GNE-202ENST00000396594 MT1AP04731 61 aa4.79□□□□□ -1.64
GNE-202ENST00000396594 TNXBP22105 4242 aa4.74□□□□□ -1.65
GNE-202ENST00000396594 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
GNE-202ENST00000396594 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms