RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
AP3S1-202ENST00000395548 MANBALQ9NQG1 85 aa2.42□□□□□ -2.02
AP3S1-202ENST00000395548 TEX49A0A1B0GTD5 131 aa2.41□□□□□ -2.02
AP3S1-202ENST00000395548 INE1O15225 51 aa2.4□□□□□ -2.03
AP3S1-202ENST00000395548 SPATA45Q537H7 98 aa2.4□□□□□ -2.03
AP3S1-202ENST00000395548 Q5VV11 94 aa2.4□□□□□ -2.03
AP3S1-202ENST00000395548 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
AP3S1-202ENST00000395548 C20orf78Q9BR46 151 aa2.4□□□□□ -2.03
AP3S1-202ENST00000395548 SNURFQ9Y675 71 aa2.4□□□□□ -2.03
AP3S1-202ENST00000395548 I3L3M4 83 aa2.39□□□□□ -2.03
AP3S1-202ENST00000395548 GNGT1P63211 74 aa2.39□□□□□ -2.03
AP3S1-202ENST00000395548 C7orf77A4D0Y5 90 aa2.38□□□□□ -2.03
AP3S1-202ENST00000395548 APOC3P02656 99 aa2.38□□□□□ -2.03
AP3S1-202ENST00000395548 C20orf197Q8N268 126 aa2.38□□□□□ -2.03
AP3S1-202ENST00000395548 MED9Q9NWA0 146 aa2.38□□□□□ -2.03
AP3S1-202ENST00000395548 UQCR10Q9UDW1 63 aa2.38□□□□□ -2.03
AP3S1-202ENST00000395548 LOC101927531A0A1B0GV80 90 aa2.37□□□□□ -2.03
AP3S1-202ENST00000395548 SYS1-DBNDD2H3BUS1 97 aa2.37□□□□□ -2.03
AP3S1-202ENST00000395548 PRO1854Q9UHT4 67 aa2.37□□□□□ -2.03
AP3S1-202ENST00000395548 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
AP3S1-202ENST00000395548 IGKV4-1P06312 121 aa2.36□□□□□ -2.03
AP3S1-202ENST00000395548 MT1BP07438 61 aa2.36□□□□□ -2.03
AP3S1-202ENST00000395548 COX6CP09669 75 aa2.36□□□□□ -2.03
AP3S1-202ENST00000395548 ELOF1P60002 83 aaKnown RBP2.36□□□□□ -2.03
AP3S1-202ENST00000395548 PPP1R1CQ8WVI7 109 aa2.36□□□□□ -2.03
AP3S1-202ENST00000395548 ZNF625Q96I27 306 aaPredicted RBP2.36□□□□□ -2.03
AP3S1-202ENST00000395548 NXT2Q9NPJ8 142 aaKnown RBP2.36□□□□□ -2.03
AP3S1-202ENST00000395548 LOC110117498A0A087WWA1 95 aa2.35□□□□□ -2.03
AP3S1-202ENST00000395548 CHKB-CPT1BH3BT56 60 aa2.35□□□□□ -2.03
AP3S1-202ENST00000395548 MT4P47944 62 aa2.35□□□□□ -2.03
AP3S1-202ENST00000395548 COX7B2Q8TF08 81 aa2.35□□□□□ -2.03
AP3S1-202ENST00000395548 TRAV22A0A0B4J277 110 aa2.34□□□□□ -2.03
AP3S1-202ENST00000395548 ARL14EPLP0DKL9 152 aa2.34□□□□□ -2.03
AP3S1-202ENST00000395548 SMIM4Q8WVI0 70 aa2.34□□□□□ -2.03
AP3S1-202ENST00000395548 ZCCHC13Q8WW36 166 aaKnown RBP2.34□□□□□ -2.03
AP3S1-202ENST00000395548 TMEM167BQ9NRX6 74 aa2.34□□□□□ -2.03
AP3S1-202ENST00000395548 F2Z2F3 143 aa2.33□□□□□ -2.04
AP3S1-202ENST00000395548 F8VRH5 84 aa2.33□□□□□ -2.04
AP3S1-202ENST00000395548 RPL39LQ96EH5 51 aaKnown RBP2.33□□□□□ -2.04
AP3S1-202ENST00000395548 IGKV3D-7A0A0C4DH55 119 aa2.32□□□□□ -2.04
AP3S1-202ENST00000395548 PPP1R17O96001 155 aa2.32□□□□□ -2.04
AP3S1-202ENST00000395548 GCHFRP30047 84 aa2.32□□□□□ -2.04
AP3S1-202ENST00000395548 ALKAL2Q6UX46 152 aa2.32□□□□□ -2.04
AP3S1-202ENST00000395548 Q8IZM0 81 aa2.32□□□□□ -2.04
AP3S1-202ENST00000395548 TOMM7Q9P0U1 55 aa2.32□□□□□ -2.04
AP3S1-202ENST00000395548 SPCS1Q9Y6A9 102 aa2.32□□□□□ -2.04
AP3S1-202ENST00000395548 H7BZZ5 65 aa2.31□□□□□ -2.04
AP3S1-202ENST00000395548 FCER1GP30273 86 aa2.31□□□□□ -2.04
AP3S1-202ENST00000395548 ADIRFQ15847 76 aa2.31□□□□□ -2.04
AP3S1-202ENST00000395548 CYSTM1Q9H1C7 97 aa2.31□□□□□ -2.04
AP3S1-202ENST00000395548 ST20Q9HBF5 79 aa2.31□□□□□ -2.04
AP3S1-202ENST00000395548 V9GYV3 84 aa2.31□□□□□ -2.04
AP3S1-202ENST00000395548 SFTA2Q6UW10 78 aa2.3□□□□□ -2.04
AP3S1-202ENST00000395548 V9GYH0 126 aa2.3□□□□□ -2.04
AP3S1-202ENST00000395548 ETDCA0A1B0GVM5 59 aa2.29□□□□□ -2.04
AP3S1-202ENST00000395548 PMCHL1Q16048 86 aa2.29□□□□□ -2.04
AP3S1-202ENST00000395548 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
AP3S1-202ENST00000395548 TMEM170BQ5T4T1 132 aa2.29□□□□□ -2.04
AP3S1-202ENST00000395548 OBSCN-AS1Q96MR7 158 aa2.29□□□□□ -2.04
AP3S1-202ENST00000395548 KLKP1Q107X0 134 aa2.28□□□□□ -2.04
AP3S1-202ENST00000395548 HIGD1BQ9P298 99 aa2.28□□□□□ -2.04
AP3S1-202ENST00000395548 POLR2KP53803 58 aaKnown RBP2.27□□□□□ -2.05
AP3S1-202ENST00000395548 ETDBQ3ZM63 59 aa2.27□□□□□ -2.05
AP3S1-202ENST00000395548 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
AP3S1-202ENST00000395548 A0A1W2PPM0 123 aa2.26□□□□□ -2.05
AP3S1-202ENST00000395548 KANTRA0A1W2PQU2 76 aa2.26□□□□□ -2.05
AP3S1-202ENST00000395548 Q6ZQY7 126 aa2.26□□□□□ -2.05
AP3S1-202ENST00000395548 LINC00208Q96KT6 92 aa2.26□□□□□ -2.05
AP3S1-202ENST00000395548 KRTAP13-4Q3LI77 160 aa2.25□□□□□ -2.05
AP3S1-202ENST00000395548 BAGE2Q86Y30 109 aa2.25□□□□□ -2.05
AP3S1-202ENST00000395548 Q96NJ1 140 aa2.25□□□□□ -2.05
AP3S1-202ENST00000395548 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
AP3S1-202ENST00000395548 SPRR1AP35321 89 aa2.24□□□□□ -2.05
AP3S1-202ENST00000395548 TOMM5Q8N4H5 51 aa2.24□□□□□ -2.05
AP3S1-202ENST00000395548 AMELXQ99217 191 aa2.24□□□□□ -2.05
AP3S1-202ENST00000395548 SMCO4Q9NRQ5 59 aa2.24□□□□□ -2.05
AP3S1-202ENST00000395548 ZNF815PA8K554 130 aa2.23□□□□□ -2.05
AP3S1-202ENST00000395548 CNFNQ9BYD5 112 aa2.22□□□□□ -2.05
AP3S1-202ENST00000395548 SPRR2GQ9BYE4 73 aa2.22□□□□□ -2.05
AP3S1-202ENST00000395548 KCNQ1DNQ9H478 68 aa2.22□□□□□ -2.05
AP3S1-202ENST00000395548 CTXND1A0A1B0GTU2 59 aa2.21□□□□□ -2.06
AP3S1-202ENST00000395548 ACYP1P07311 99 aa2.21□□□□□ -2.06
AP3S1-202ENST00000395548 RPL39P62891 51 aaKnown RBP2.21□□□□□ -2.06
AP3S1-202ENST00000395548 BAGE3Q86Y29 109 aa2.21□□□□□ -2.06
AP3S1-202ENST00000395548 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
AP3S1-202ENST00000395548 IGLC3P0DOY3 106 aa2.2□□□□□ -2.06
AP3S1-202ENST00000395548 IFI27P40305 119 aaPredicted RBP2.2□□□□□ -2.06
AP3S1-202ENST00000395548 BVES-AS1Q5T3Y7 98 aa2.2□□□□□ -2.06
AP3S1-202ENST00000395548 F8WEM9 126 aa2.19□□□□□ -2.06
AP3S1-202ENST00000395548 UQCR11O14957 56 aa2.19□□□□□ -2.06
AP3S1-202ENST00000395548 SERF2P84101 59 aa2.19□□□□□ -2.06
AP3S1-202ENST00000395548 LINC00643Q86TS7 51 aa2.19□□□□□ -2.06
AP3S1-202ENST00000395548 LINC01558Q9Y6Z2 57 aa2.19□□□□□ -2.06
AP3S1-202ENST00000395548 H3BUT2 72 aa2.18□□□□□ -2.06
AP3S1-202ENST00000395548 Q6ZRX8 168 aa2.18□□□□□ -2.06
AP3S1-202ENST00000395548 COX17Q14061 63 aa2.17□□□□□ -2.06
AP3S1-202ENST00000395548 PRR15LQ9BU68 103 aa2.17□□□□□ -2.06
AP3S1-202ENST00000395548 NCR3O14931 201 aa2.16□□□□□ -2.06
AP3S1-202ENST00000395548 ACYP2P14621 99 aa2.16□□□□□ -2.06
AP3S1-202ENST00000395548 SPRR1BP22528 89 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms