RNA–Protein interactions for RNA: ENST00000395290.6

CELF1-204, Transcript of CUGBP Elav-like family member 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CELF1, Length 7,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-204ENST00000395290 CSMD2Q7Z408 3487 aa4.61□□□□□ -1.67
CELF1-204ENST00000395290 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
CELF1-204ENST00000395290 CSMD3Q7Z407 3707 aa4.54□□□□□ -1.68
CELF1-204ENST00000395290 AKAP9Q99996 3911 aa4.53□□□□□ -1.68
CELF1-204ENST00000395290 KRTAP19-5Q3LI72 72 aa4.52□□□□□ -1.69
CELF1-204ENST00000395290 KRTAP10-4P60372 401 aaPredicted RBP4.51□□□□□ -1.69
CELF1-204ENST00000395290 HUWE1Q7Z6Z7 4374 aaKnown RBP4.48□□□□□ -1.69
CELF1-204ENST00000395290 ZNF469Q96JG9 3925 aaPredicted RBP4.47□□□□□ -1.69
CELF1-204ENST00000395290 KRTAP4-5Q9BYR2 181 aa4.44□□□□□ -1.7
CELF1-204ENST00000395290 SPRR2FQ96RM1 72 aa4.44□□□□□ -1.7
CELF1-204ENST00000395290 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
CELF1-204ENST00000395290 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
CELF1-204ENST00000395290 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
CELF1-204ENST00000395290 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
CELF1-204ENST00000395290 MT1HP80294 61 aa4.31□□□□□ -1.72
CELF1-204ENST00000395290 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
CELF1-204ENST00000395290 DNAH9Q9NYC9 4486 aa4.3□□□□□ -1.72
CELF1-204ENST00000395290 MT2AP02795 61 aa4.26□□□□□ -1.73
CELF1-204ENST00000395290 DNAH1Q9P2D7 4330 aa4.24□□□□□ -1.73
CELF1-204ENST00000395290 DNAH3Q8TD57 4116 aa4.21□□□□□ -1.74
CELF1-204ENST00000395290 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
CELF1-204ENST00000395290 VPS13DQ5THJ4 4388 aa4.19□□□□□ -1.74
CELF1-204ENST00000395290 CMYA5Q8N3K9 4069 aa4.18□□□□□ -1.74
CELF1-204ENST00000395290 SPRR2EP22531 72 aa4.18□□□□□ -1.74
CELF1-204ENST00000395290 SPRR2BP35325 72 aa4.18□□□□□ -1.74
CELF1-204ENST00000395290 SPRR2AP35326 72 aa4.18□□□□□ -1.74
CELF1-204ENST00000395290 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
CELF1-204ENST00000395290 DNAH8Q96JB1 4490 aa4.15□□□□□ -1.75
CELF1-204ENST00000395290 MT1FP04733 61 aa4.14□□□□□ -1.75
CELF1-204ENST00000395290 MT1GP13640 62 aa4.14□□□□□ -1.75
CELF1-204ENST00000395290 DNAH17Q9UFH2 4485 aa4.13□□□□□ -1.75
CELF1-204ENST00000395290 PLECQ15149 4684 aaKnown RBP4.12□□□□□ -1.75
CELF1-204ENST00000395290 DNAH6Q9C0G6 4158 aa4.11□□□□□ -1.75
CELF1-204ENST00000395290 DNAH10Q8IVF4 4471 aa4.11□□□□□ -1.75
CELF1-204ENST00000395290 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
CELF1-204ENST00000395290 ANK2Q01484 3957 aa4.09□□□□□ -1.75
CELF1-204ENST00000395290 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.76
CELF1-204ENST00000395290 DYNC2H1Q8NCM8 4307 aaKnown RBP4.07□□□□□ -1.76
CELF1-204ENST00000395290 DNAH11Q96DT5 4516 aa4.06□□□□□ -1.76
CELF1-204ENST00000395290 SPRR2DP22532 72 aa4.05□□□□□ -1.76
CELF1-204ENST00000395290 LCE2BO14633 110 aa4.04□□□□□ -1.76
CELF1-204ENST00000395290 DNAH7Q8WXX0 4024 aa4.03□□□□□ -1.76
CELF1-204ENST00000395290 FRAS1Q86XX4 4008 aa4.01□□□□□ -1.77
CELF1-204ENST00000395290 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
CELF1-204ENST00000395290 SPRR5A0A1B0GTR4 108 aa4□□□□□ -1.77
CELF1-204ENST00000395290 VPS13BQ7Z7G8 4022 aa3.99□□□□□ -1.77
CELF1-204ENST00000395290 STARD9Q9P2P6 4700 aa3.99□□□□□ -1.77
CELF1-204ENST00000395290 FAT2Q9NYQ8 4349 aa3.98□□□□□ -1.77
CELF1-204ENST00000395290 HECTD4Q9Y4D8 3996 aa3.98□□□□□ -1.77
CELF1-204ENST00000395290 KMT2AQ03164 3969 aa3.97□□□□□ -1.77
CELF1-204ENST00000395290 MT3P25713 68 aa3.95□□□□□ -1.78
CELF1-204ENST00000395290 PRM1P04553 51 aa3.93□□□□□ -1.78
CELF1-204ENST00000395290 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
CELF1-204ENST00000395290 KRTAP19-8Q3LI54 63 aa3.91□□□□□ -1.78
CELF1-204ENST00000395290 MT1XP80297 61 aa3.9□□□□□ -1.79
CELF1-204ENST00000395290 LYSTQ99698 3801 aa3.87□□□□□ -1.79
CELF1-204ENST00000395290 DYNC1H1Q14204 4646 aaKnown RBP3.87□□□□□ -1.79
CELF1-204ENST00000395290 SACSQ9NZJ4 4579 aa3.84□□□□□ -1.79
CELF1-204ENST00000395290 KRTAP19-1Q8IUB9 90 aa3.82□□□□□ -1.8
CELF1-204ENST00000395290 LCE2CQ5TA81 110 aa3.8□□□□□ -1.8
CELF1-204ENST00000395290 DNHD1Q96M86 4753 aa3.8□□□□□ -1.8
CELF1-204ENST00000395290 FAT1Q14517 4588 aa3.79□□□□□ -1.8
CELF1-204ENST00000395290 KRTAP4-8A0A0G2JLE6 195 aa3.76□□□□□ -1.81
CELF1-204ENST00000395290 KRTAP4-8Q9BYQ9 185 aa3.76□□□□□ -1.81
CELF1-204ENST00000395290 MT1LQ93083 61 aa3.73□□□□□ -1.81
CELF1-204ENST00000395290 LCE2DQ5TA82 110 aaPredicted RBP3.72□□□□□ -1.81
CELF1-204ENST00000395290 LRP1Q07954 4544 aaKnown RBP3.7□□□□□ -1.82
CELF1-204ENST00000395290 MT1BP07438 61 aa3.69□□□□□ -1.82
CELF1-204ENST00000395290 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
CELF1-204ENST00000395290 APOBP04114 4563 aaKnown RBP3.68□□□□□ -1.82
CELF1-204ENST00000395290 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
CELF1-204ENST00000395290 FLGP20930 4061 aaPredicted RBP3.65□□□□□ -1.83
CELF1-204ENST00000395290 KRTAP4-7Q9BYR0 210 aa3.63□□□□□ -1.83
CELF1-204ENST00000395290 RYR1P21817 5038 aa3.62□□□□□ -1.83
CELF1-204ENST00000395290 LCE1DQ5T752 114 aa3.61□□□□□ -1.83
CELF1-204ENST00000395290 MT4P47944 62 aa3.59□□□□□ -1.84
CELF1-204ENST00000395290 MYCBP2O75592 4640 aa3.58□□□□□ -1.84
CELF1-204ENST00000395290 FAT3Q8TDW7 4589 aa3.58□□□□□ -1.84
CELF1-204ENST00000395290 PKHD1P08F94 4074 aa3.58□□□□□ -1.84
CELF1-204ENST00000395290 KRTAP9-8Q9BYQ0 159 aa3.56□□□□□ -1.84
CELF1-204ENST00000395290 RYR2Q92736 4967 aa3.55□□□□□ -1.84
CELF1-204ENST00000395290 MT1EP04732 61 aa3.55□□□□□ -1.84
CELF1-204ENST00000395290 KRTAP17-1Q9BYP8 105 aa3.52□□□□□ -1.85
CELF1-204ENST00000395290 RYR3Q15413 4870 aa3.51□□□□□ -1.85
CELF1-204ENST00000395290 PKD1P98161 4303 aa3.51□□□□□ -1.85
CELF1-204ENST00000395290 LOC100996750A0A140TA64 210 aa3.5□□□□□ -1.85
CELF1-204ENST00000395290 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
CELF1-204ENST00000395290 KRTAP9-3Q9BYQ3 159 aa3.49□□□□□ -1.85
CELF1-204ENST00000395290 HSPG2P98160 4391 aa3.48□□□□□ -1.85
CELF1-204ENST00000395290 MT1MQ8N339 61 aa3.48□□□□□ -1.85
CELF1-204ENST00000395290 KIAA1109Q2LD37 5005 aa3.47□□□□□ -1.85
CELF1-204ENST00000395290 LCE5AQ5TCM9 118 aa3.43□□□□□ -1.86
CELF1-204ENST00000395290 TNXBP22105 4242 aa3.42□□□□□ -1.86
CELF1-204ENST00000395290 LRP2P98164 4655 aa3.41□□□□□ -1.86
CELF1-204ENST00000395290 KRTAP19-2Q3LHN2 52 aa3.41□□□□□ -1.86
CELF1-204ENST00000395290 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
CELF1-204ENST00000395290 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
CELF1-204ENST00000395290 HYDINQ4G0P3 5121 aa3.32□□□□□ -1.88
CELF1-204ENST00000395290 LPAP08519 4548 aa3.32□□□□□ -1.88
CELF1-204ENST00000395290 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms