RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 PLECQ15149 4684 aaKnown RBP3.99□□□□□ -1.77
GABRA1-202ENST00000393943 DYNC2H1Q8NCM8 4307 aaKnown RBP3.95□□□□□ -1.78
GABRA1-202ENST00000393943 MT1HL1P0DM35 61 aa3.94□□□□□ -1.78
GABRA1-202ENST00000393943 DNAH11Q96DT5 4516 aa3.93□□□□□ -1.78
GABRA1-202ENST00000393943 DNAH2Q9P225 4427 aa3.92□□□□□ -1.78
GABRA1-202ENST00000393943 INE1O15225 51 aa3.9□□□□□ -1.79
GABRA1-202ENST00000393943 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
GABRA1-202ENST00000393943 CSMD3Q7Z407 3707 aa3.85□□□□□ -1.79
GABRA1-202ENST00000393943 DNAH6Q9C0G6 4158 aa3.85□□□□□ -1.79
GABRA1-202ENST00000393943 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
GABRA1-202ENST00000393943 STARD9Q9P2P6 4700 aa3.83□□□□□ -1.8
GABRA1-202ENST00000393943 CMYA5Q8N3K9 4069 aa3.82□□□□□ -1.8
GABRA1-202ENST00000393943 ANK2Q01484 3957 aa3.81□□□□□ -1.8
GABRA1-202ENST00000393943 DNAH5Q8TE73 4624 aa3.81□□□□□ -1.8
GABRA1-202ENST00000393943 HECTD4Q9Y4D8 3996 aa3.8□□□□□ -1.8
GABRA1-202ENST00000393943 SACSQ9NZJ4 4579 aa3.8□□□□□ -1.8
GABRA1-202ENST00000393943 LRP1BQ9NZR2 4599 aa3.78□□□□□ -1.8
GABRA1-202ENST00000393943 KRTAP10-10P60014 251 aa3.76□□□□□ -1.81
GABRA1-202ENST00000393943 DNAH7Q8WXX0 4024 aa3.73□□□□□ -1.81
GABRA1-202ENST00000393943 LORP23490 312 aaPredicted RBP3.72□□□□□ -1.81
GABRA1-202ENST00000393943 FRAS1Q86XX4 4008 aa3.72□□□□□ -1.81
GABRA1-202ENST00000393943 VPS13BQ7Z7G8 4022 aa3.71□□□□□ -1.82
GABRA1-202ENST00000393943 DYNC1H1Q14204 4646 aaKnown RBP3.69□□□□□ -1.82
GABRA1-202ENST00000393943 KMT2AQ03164 3969 aa3.68□□□□□ -1.82
GABRA1-202ENST00000393943 FAT2Q9NYQ8 4349 aa3.67□□□□□ -1.82
GABRA1-202ENST00000393943 PRKDCP78527 4128 aaKnown RBP3.67□□□□□ -1.82
GABRA1-202ENST00000393943 LYSTQ99698 3801 aa3.63□□□□□ -1.83
GABRA1-202ENST00000393943 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
GABRA1-202ENST00000393943 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
GABRA1-202ENST00000393943 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
GABRA1-202ENST00000393943 FAT1Q14517 4588 aa3.58□□□□□ -1.84
GABRA1-202ENST00000393943 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
GABRA1-202ENST00000393943 SPRR2GQ9BYE4 73 aa3.56□□□□□ -1.84
GABRA1-202ENST00000393943 APOBP04114 4563 aaKnown RBP3.55□□□□□ -1.84
GABRA1-202ENST00000393943 FAT3Q8TDW7 4589 aa3.55□□□□□ -1.84
GABRA1-202ENST00000393943 PKHD1L1Q86WI1 4243 aa3.54□□□□□ -1.84
GABRA1-202ENST00000393943 KRTAP4-1Q9BYQ7 146 aa3.53□□□□□ -1.84
GABRA1-202ENST00000393943 PKD1P98161 4303 aa3.49□□□□□ -1.85
GABRA1-202ENST00000393943 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
GABRA1-202ENST00000393943 KRTAP4-5Q9BYR2 181 aa3.48□□□□□ -1.85
GABRA1-202ENST00000393943 LRP1Q07954 4544 aaKnown RBP3.47□□□□□ -1.85
GABRA1-202ENST00000393943 PKHD1P08F94 4074 aa3.46□□□□□ -1.86
GABRA1-202ENST00000393943 MYCBP2O75592 4640 aa3.45□□□□□ -1.86
GABRA1-202ENST00000393943 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.86
GABRA1-202ENST00000393943 DNHD1Q96M86 4753 aa3.39□□□□□ -1.87
GABRA1-202ENST00000393943 RYR2Q92736 4967 aa3.39□□□□□ -1.87
GABRA1-202ENST00000393943 TNXBP22105 4242 aa3.38□□□□□ -1.87
GABRA1-202ENST00000393943 HSPG2P98160 4391 aa3.36□□□□□ -1.87
GABRA1-202ENST00000393943 RYR1P21817 5038 aa3.36□□□□□ -1.87
GABRA1-202ENST00000393943 HYDINQ4G0P3 5121 aa3.35□□□□□ -1.87
GABRA1-202ENST00000393943 LCE2AQ5TA79 106 aaPredicted RBP3.35□□□□□ -1.87
GABRA1-202ENST00000393943 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.87
GABRA1-202ENST00000393943 MT2AP02795 61 aa3.34□□□□□ -1.88
GABRA1-202ENST00000393943 KRTAP19-1Q8IUB9 90 aa3.33□□□□□ -1.88
GABRA1-202ENST00000393943 MT1HP80294 61 aa3.32□□□□□ -1.88
GABRA1-202ENST00000393943 KRTAP17-1Q9BYP8 105 aa3.3□□□□□ -1.88
GABRA1-202ENST00000393943 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
GABRA1-202ENST00000393943 MT1FP04733 61 aa3.27□□□□□ -1.89
GABRA1-202ENST00000393943 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
GABRA1-202ENST00000393943 LRP2P98164 4655 aa3.24□□□□□ -1.89
GABRA1-202ENST00000393943 RYR3Q15413 4870 aa3.24□□□□□ -1.89
GABRA1-202ENST00000393943 LCE2BO14633 110 aa3.23□□□□□ -1.89
GABRA1-202ENST00000393943 KIAA1109Q2LD37 5005 aa3.21□□□□□ -1.9
GABRA1-202ENST00000393943 LCE2CQ5TA81 110 aa3.21□□□□□ -1.9
GABRA1-202ENST00000393943 MT1XP80297 61 aa3.2□□□□□ -1.9
GABRA1-202ENST00000393943 KRTAP10-5P60370 271 aa3.19□□□□□ -1.9
GABRA1-202ENST00000393943 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
GABRA1-202ENST00000393943 HERC1Q15751 4861 aa3.16□□□□□ -1.9
GABRA1-202ENST00000393943 MT1BP07438 61 aa3.16□□□□□ -1.9
GABRA1-202ENST00000393943 KMT2CQ8NEZ4 4911 aaKnown RBP3.15□□□□□ -1.9
GABRA1-202ENST00000393943 MUC17Q685J3 4493 aa3.14□□□□□ -1.91
GABRA1-202ENST00000393943 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
GABRA1-202ENST00000393943 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
GABRA1-202ENST00000393943 KRTAP9-8Q9BYQ0 159 aa3.12□□□□□ -1.91
GABRA1-202ENST00000393943 LPAP08519 4548 aa3.03□□□□□ -1.92
GABRA1-202ENST00000393943 KRTAP9-3Q9BYQ3 159 aa3.03□□□□□ -1.92
GABRA1-202ENST00000393943 HERC2O95714 4834 aa2.98□□□□□ -1.93
GABRA1-202ENST00000393943 BIRC6Q9NR09 4857 aa2.97□□□□□ -1.93
GABRA1-202ENST00000393943 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
GABRA1-202ENST00000393943 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.94
GABRA1-202ENST00000393943 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.94
GABRA1-202ENST00000393943 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.94
GABRA1-202ENST00000393943 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
GABRA1-202ENST00000393943 MT1LQ93083 61 aa2.87□□□□□ -1.95
GABRA1-202ENST00000393943 MT1GP13640 62 aa2.84□□□□□ -1.96
GABRA1-202ENST00000393943 KRTAP4-8A0A0G2JLE6 195 aa2.83□□□□□ -1.96
GABRA1-202ENST00000393943 MT1EP04732 61 aa2.83□□□□□ -1.96
GABRA1-202ENST00000393943 KRTAP4-8Q9BYQ9 185 aa2.83□□□□□ -1.96
GABRA1-202ENST00000393943 ABCA13Q86UQ4 5058 aa2.79□□□□□ -1.96
GABRA1-202ENST00000393943 HMCN2Q8NDA2 5059 aa2.79□□□□□ -1.96
GABRA1-202ENST00000393943 KRTAP19-7Q3SYF9 63 aa2.77□□□□□ -1.97
GABRA1-202ENST00000393943 EPPK1P58107 5090 aaKnown RBP2.75□□□□□ -1.97
GABRA1-202ENST00000393943 PCLOQ9Y6V0 5065 aa2.75□□□□□ -1.97
GABRA1-202ENST00000393943 KRTAP19-3Q7Z4W3 81 aa2.74□□□□□ -1.97
GABRA1-202ENST00000393943 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
GABRA1-202ENST00000393943 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
GABRA1-202ENST00000393943 SPRR2FQ96RM1 72 aa2.71□□□□□ -1.98
GABRA1-202ENST00000393943 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
GABRA1-202ENST00000393943 KRTAP9-6A8MVA2 160 aa2.7□□□□□ -1.98
GABRA1-202ENST00000393943 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms