RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 CRCT1Q9UGL9 99 aa3.04□□□□□ -1.92
DDX60-201ENST00000393743 DNAH10Q8IVF4 4471 aa3.02□□□□□ -1.93
DDX60-201ENST00000393743 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
DDX60-201ENST00000393743 VPS13DQ5THJ4 4388 aa3□□□□□ -1.93
DDX60-201ENST00000393743 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
DDX60-201ENST00000393743 AKAP9Q99996 3911 aa2.99□□□□□ -1.93
DDX60-201ENST00000393743 DNAH17Q9UFH2 4485 aa2.99□□□□□ -1.93
DDX60-201ENST00000393743 PLECQ15149 4684 aaKnown RBP2.97□□□□□ -1.93
DDX60-201ENST00000393743 ZNF469Q96JG9 3925 aaPredicted RBP2.97□□□□□ -1.93
DDX60-201ENST00000393743 VPS13CQ709C8 3753 aa2.96□□□□□ -1.94
DDX60-201ENST00000393743 DNAH11Q96DT5 4516 aa2.96□□□□□ -1.94
DDX60-201ENST00000393743 DNAH5Q8TE73 4624 aa2.95□□□□□ -1.94
DDX60-201ENST00000393743 DNAH1Q9P2D7 4330 aa2.95□□□□□ -1.94
DDX60-201ENST00000393743 DNAH2Q9P225 4427 aa2.92□□□□□ -1.94
DDX60-201ENST00000393743 MT1HP80294 61 aa2.91□□□□□ -1.94
DDX60-201ENST00000393743 SPRR2GQ9BYE4 73 aa2.91□□□□□ -1.94
DDX60-201ENST00000393743 LORP23490 312 aaPredicted RBP2.9□□□□□ -1.95
DDX60-201ENST00000393743 MT2AP02795 61 aa2.88□□□□□ -1.95
DDX60-201ENST00000393743 KRTAP10-5P60370 271 aa2.87□□□□□ -1.95
DDX60-201ENST00000393743 DYNC1H1Q14204 4646 aaKnown RBP2.87□□□□□ -1.95
DDX60-201ENST00000393743 DYNC2H1Q8NCM8 4307 aaKnown RBP2.86□□□□□ -1.95
DDX60-201ENST00000393743 DNAH3Q8TD57 4116 aa2.85□□□□□ -1.95
DDX60-201ENST00000393743 KRTAP10-7P60409 375 aaPredicted RBP2.85□□□□□ -1.95
DDX60-201ENST00000393743 STARD9Q9P2P6 4700 aa2.84□□□□□ -1.96
DDX60-201ENST00000393743 DNHD1Q96M86 4753 aa2.84□□□□□ -1.96
DDX60-201ENST00000393743 ANK2Q01484 3957 aa2.83□□□□□ -1.96
DDX60-201ENST00000393743 SACSQ9NZJ4 4579 aa2.83□□□□□ -1.96
DDX60-201ENST00000393743 DNAH6Q9C0G6 4158 aa2.82□□□□□ -1.96
DDX60-201ENST00000393743 KRTAP4-1Q9BYQ7 146 aa2.82□□□□□ -1.96
DDX60-201ENST00000393743 LRP1BQ9NZR2 4599 aa2.81□□□□□ -1.96
DDX60-201ENST00000393743 DNAH8Q96JB1 4490 aa2.79□□□□□ -1.96
DDX60-201ENST00000393743 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
DDX60-201ENST00000393743 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
DDX60-201ENST00000393743 MT1FP04733 61 aa2.77□□□□□ -1.97
DDX60-201ENST00000393743 PRKDCP78527 4128 aaKnown RBP2.74□□□□□ -1.97
DDX60-201ENST00000393743 FAT1Q14517 4588 aa2.74□□□□□ -1.97
DDX60-201ENST00000393743 RYR2Q92736 4967 aa2.73□□□□□ -1.97
DDX60-201ENST00000393743 KRTAP19-8Q3LI54 63 aa2.72□□□□□ -1.97
DDX60-201ENST00000393743 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
DDX60-201ENST00000393743 RYR1P21817 5038 aa2.71□□□□□ -1.97
DDX60-201ENST00000393743 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
DDX60-201ENST00000393743 KIAA1109Q2LD37 5005 aa2.68□□□□□ -1.98
DDX60-201ENST00000393743 CSMD3Q7Z407 3707 aa2.67□□□□□ -1.98
DDX60-201ENST00000393743 APOBP04114 4563 aaKnown RBP2.66□□□□□ -1.98
DDX60-201ENST00000393743 HERC1Q15751 4861 aa2.66□□□□□ -1.98
DDX60-201ENST00000393743 SPRR2EP22531 72 aa2.64□□□□□ -1.99
DDX60-201ENST00000393743 SPRR2BP35325 72 aa2.64□□□□□ -1.99
DDX60-201ENST00000393743 SPRR2AP35326 72 aa2.64□□□□□ -1.99
DDX60-201ENST00000393743 CMYA5Q8N3K9 4069 aa2.64□□□□□ -1.99
DDX60-201ENST00000393743 VPS13BQ7Z7G8 4022 aa2.63□□□□□ -1.99
DDX60-201ENST00000393743 DNAH7Q8WXX0 4024 aa2.63□□□□□ -1.99
DDX60-201ENST00000393743 KMT2AQ03164 3969 aa2.63□□□□□ -1.99
DDX60-201ENST00000393743 HSPG2P98160 4391 aa2.62□□□□□ -1.99
DDX60-201ENST00000393743 RYR3Q15413 4870 aa2.62□□□□□ -1.99
DDX60-201ENST00000393743 LRP1Q07954 4544 aaKnown RBP2.61□□□□□ -1.99
DDX60-201ENST00000393743 HECTD4Q9Y4D8 3996 aa2.61□□□□□ -1.99
DDX60-201ENST00000393743 MYCBP2O75592 4640 aa2.6□□□□□ -1.99
DDX60-201ENST00000393743 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
DDX60-201ENST00000393743 KRTAP19-1Q8IUB9 90 aa2.59□□□□□ -1.99
DDX60-201ENST00000393743 FAT3Q8TDW7 4589 aa2.59□□□□□ -1.99
DDX60-201ENST00000393743 SPRR2DP22532 72 aa2.58□□□□□ -2
DDX60-201ENST00000393743 LCE2BO14633 110 aa2.58□□□□□ -2
DDX60-201ENST00000393743 MT1GP13640 62 aa2.58□□□□□ -2
DDX60-201ENST00000393743 MT1XP80297 61 aa2.54□□□□□ -2
DDX60-201ENST00000393743 BIRC6Q9NR09 4857 aa2.53□□□□□ -2
DDX60-201ENST00000393743 MT1BP07438 61 aa2.52□□□□□ -2.01
DDX60-201ENST00000393743 PCLOQ9Y6V0 5065 aa2.51□□□□□ -2.01
DDX60-201ENST00000393743 KRTAP9-8Q9BYQ0 159 aa2.51□□□□□ -2.01
DDX60-201ENST00000393743 KMT2CQ8NEZ4 4911 aaKnown RBP2.51□□□□□ -2.01
DDX60-201ENST00000393743 LYSTQ99698 3801 aa2.51□□□□□ -2.01
DDX60-201ENST00000393743 HYDINQ4G0P3 5121 aa2.5□□□□□ -2.01
DDX60-201ENST00000393743 HERC2O95714 4834 aa2.5□□□□□ -2.01
DDX60-201ENST00000393743 LCE2CQ5TA81 110 aa2.5□□□□□ -2.01
DDX60-201ENST00000393743 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
DDX60-201ENST00000393743 PKD1P98161 4303 aa2.48□□□□□ -2.01
DDX60-201ENST00000393743 KRTAP9-3Q9BYQ3 159 aa2.48□□□□□ -2.01
DDX60-201ENST00000393743 FRAS1Q86XX4 4008 aa2.47□□□□□ -2.01
DDX60-201ENST00000393743 SPRR5A0A1B0GTR4 108 aa2.46□□□□□ -2.01
DDX60-201ENST00000393743 PKHD1L1Q86WI1 4243 aa2.46□□□□□ -2.02
DDX60-201ENST00000393743 LCE3BQ5TA77 95 aa2.45□□□□□ -2.02
DDX60-201ENST00000393743 PKHD1P08F94 4074 aa2.43□□□□□ -2.02
DDX60-201ENST00000393743 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
DDX60-201ENST00000393743 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
DDX60-201ENST00000393743 LRP2P98164 4655 aa2.42□□□□□ -2.02
DDX60-201ENST00000393743 KRTAP9-6A0A140TA67 174 aa2.4□□□□□ -2.02
DDX60-201ENST00000393743 MT1LQ93083 61 aa2.4□□□□□ -2.02
DDX60-201ENST00000393743 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
DDX60-201ENST00000393743 MUC17Q685J3 4493 aa2.38□□□□□ -2.03
DDX60-201ENST00000393743 LCE2DQ5TA82 110 aaPredicted RBP2.37□□□□□ -2.03
DDX60-201ENST00000393743 TNXBP22105 4242 aa2.36□□□□□ -2.03
DDX60-201ENST00000393743 EPPK1P58107 5090 aaKnown RBP2.36□□□□□ -2.03
DDX60-201ENST00000393743 KRTAP4-8A0A0G2JLE6 195 aa2.35□□□□□ -2.03
DDX60-201ENST00000393743 KRTAP19-6Q3LI70 58 aa2.35□□□□□ -2.03
DDX60-201ENST00000393743 KRTAP4-8Q9BYQ9 185 aa2.35□□□□□ -2.03
DDX60-201ENST00000393743 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.03
DDX60-201ENST00000393743 MT3P25713 68 aa2.34□□□□□ -2.04
DDX60-201ENST00000393743 MT1EP04732 61 aa2.33□□□□□ -2.04
DDX60-201ENST00000393743 FLGP20930 4061 aaPredicted RBP2.32□□□□□ -2.04
DDX60-201ENST00000393743 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
DDX60-201ENST00000393743 KRTAP9-2Q9BYQ4 174 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms