RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 FRAS1Q86XX4 4008 aa4.9□□□□□ -1.62
RAD50-201ENST00000378823 MT1HL1P0DM35 61 aa4.88□□□□□ -1.63
RAD50-201ENST00000378823 KMT2AQ03164 3969 aa4.85□□□□□ -1.63
RAD50-201ENST00000378823 DNAH2Q9P225 4427 aa4.84□□□□□ -1.63
RAD50-201ENST00000378823 VPS13BQ7Z7G8 4022 aa4.83□□□□□ -1.64
RAD50-201ENST00000378823 DNAH3Q8TD57 4116 aa4.81□□□□□ -1.64
RAD50-201ENST00000378823 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
RAD50-201ENST00000378823 ANK2Q01484 3957 aa4.79□□□□□ -1.64
RAD50-201ENST00000378823 CMYA5Q8N3K9 4069 aa4.77□□□□□ -1.65
RAD50-201ENST00000378823 DNAH7Q8WXX0 4024 aa4.76□□□□□ -1.65
RAD50-201ENST00000378823 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
RAD50-201ENST00000378823 HECTD4Q9Y4D8 3996 aa4.73□□□□□ -1.65
RAD50-201ENST00000378823 DNAH1Q9P2D7 4330 aa4.72□□□□□ -1.65
RAD50-201ENST00000378823 KRTAP10-5P60370 271 aa4.7□□□□□ -1.66
RAD50-201ENST00000378823 KRTAP10-4P60372 401 aaPredicted RBP4.67□□□□□ -1.66
RAD50-201ENST00000378823 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
RAD50-201ENST00000378823 LORP23490 312 aaPredicted RBP4.6□□□□□ -1.67
RAD50-201ENST00000378823 DNAH9Q9NYC9 4486 aa4.56□□□□□ -1.68
RAD50-201ENST00000378823 DNAH10Q8IVF4 4471 aa4.54□□□□□ -1.68
RAD50-201ENST00000378823 DNAH6Q9C0G6 4158 aa4.49□□□□□ -1.69
RAD50-201ENST00000378823 PRKDCP78527 4128 aaKnown RBP4.48□□□□□ -1.69
RAD50-201ENST00000378823 FAT2Q9NYQ8 4349 aa4.41□□□□□ -1.7
RAD50-201ENST00000378823 SPRR2GQ9BYE4 73 aa4.37□□□□□ -1.71
RAD50-201ENST00000378823 KRTAP10-7P60409 375 aaPredicted RBP4.35□□□□□ -1.71
RAD50-201ENST00000378823 PLECQ15149 4684 aaKnown RBP4.34□□□□□ -1.71
RAD50-201ENST00000378823 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.71
RAD50-201ENST00000378823 DNAH11Q96DT5 4516 aa4.32□□□□□ -1.72
RAD50-201ENST00000378823 MT1HP80294 61 aa4.31□□□□□ -1.72
RAD50-201ENST00000378823 FLGP20930 4061 aaPredicted RBP4.3□□□□□ -1.72
RAD50-201ENST00000378823 DYNC2H1Q8NCM8 4307 aaKnown RBP4.3□□□□□ -1.72
RAD50-201ENST00000378823 LCE3CQ5T5A8 94 aa4.3□□□□□ -1.72
RAD50-201ENST00000378823 STARD9Q9P2P6 4700 aa4.29□□□□□ -1.72
RAD50-201ENST00000378823 KRTAP4-1Q9BYQ7 146 aa4.28□□□□□ -1.72
RAD50-201ENST00000378823 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
RAD50-201ENST00000378823 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
RAD50-201ENST00000378823 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
RAD50-201ENST00000378823 VPS13DQ5THJ4 4388 aa4.25□□□□□ -1.73
RAD50-201ENST00000378823 MT2AP02795 61 aa4.23□□□□□ -1.73
RAD50-201ENST00000378823 DNAH17Q9UFH2 4485 aa4.23□□□□□ -1.73
RAD50-201ENST00000378823 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
RAD50-201ENST00000378823 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
RAD50-201ENST00000378823 PKHD1P08F94 4074 aa4.15□□□□□ -1.75
RAD50-201ENST00000378823 MT1FP04733 61 aa4.14□□□□□ -1.75
RAD50-201ENST00000378823 FAT1Q14517 4588 aa4.08□□□□□ -1.76
RAD50-201ENST00000378823 LCE3BQ5TA77 95 aa4.04□□□□□ -1.76
RAD50-201ENST00000378823 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
RAD50-201ENST00000378823 FAT3Q8TDW7 4589 aa4.01□□□□□ -1.77
RAD50-201ENST00000378823 APOBP04114 4563 aaKnown RBP3.98□□□□□ -1.77
RAD50-201ENST00000378823 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
RAD50-201ENST00000378823 SPRR2EP22531 72 aa3.97□□□□□ -1.77
RAD50-201ENST00000378823 SPRR2BP35325 72 aa3.97□□□□□ -1.77
RAD50-201ENST00000378823 SPRR2AP35326 72 aa3.97□□□□□ -1.77
RAD50-201ENST00000378823 MYCBP2O75592 4640 aa3.96□□□□□ -1.77
RAD50-201ENST00000378823 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
RAD50-201ENST00000378823 DNHD1Q96M86 4753 aa3.93□□□□□ -1.78
RAD50-201ENST00000378823 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
RAD50-201ENST00000378823 PKD1P98161 4303 aa3.91□□□□□ -1.78
RAD50-201ENST00000378823 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
RAD50-201ENST00000378823 DYNC1H1Q14204 4646 aaKnown RBP3.89□□□□□ -1.79
RAD50-201ENST00000378823 LCE2BO14633 110 aa3.88□□□□□ -1.79
RAD50-201ENST00000378823 MT1GP13640 62 aa3.88□□□□□ -1.79
RAD50-201ENST00000378823 MT1XP80297 61 aa3.88□□□□□ -1.79
RAD50-201ENST00000378823 LRP1Q07954 4544 aaKnown RBP3.86□□□□□ -1.79
RAD50-201ENST00000378823 SPRR2DP22532 72 aa3.84□□□□□ -1.79
RAD50-201ENST00000378823 LCE3DQ9BYE3 92 aa3.82□□□□□ -1.8
RAD50-201ENST00000378823 TNXBP22105 4242 aa3.79□□□□□ -1.8
RAD50-201ENST00000378823 LPAP08519 4548 aa3.79□□□□□ -1.8
RAD50-201ENST00000378823 HSPG2P98160 4391 aa3.78□□□□□ -1.8
RAD50-201ENST00000378823 RYR1P21817 5038 aa3.78□□□□□ -1.8
RAD50-201ENST00000378823 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.81
RAD50-201ENST00000378823 KRTAP17-1Q9BYP8 105 aa3.77□□□□□ -1.81
RAD50-201ENST00000378823 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
RAD50-201ENST00000378823 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
RAD50-201ENST00000378823 KRTAP4-8A0A0G2JLE6 195 aa3.71□□□□□ -1.81
RAD50-201ENST00000378823 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.81
RAD50-201ENST00000378823 MT1BP07438 61 aa3.71□□□□□ -1.82
RAD50-201ENST00000378823 LRP2P98164 4655 aa3.64□□□□□ -1.83
RAD50-201ENST00000378823 MT1LQ93083 61 aa3.63□□□□□ -1.83
RAD50-201ENST00000378823 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
RAD50-201ENST00000378823 KRTAP9-3Q9BYQ3 159 aa3.61□□□□□ -1.83
RAD50-201ENST00000378823 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
RAD50-201ENST00000378823 RYR3Q15413 4870 aa3.54□□□□□ -1.84
RAD50-201ENST00000378823 LCE2DQ5TA82 110 aaPredicted RBP3.53□□□□□ -1.84
RAD50-201ENST00000378823 MT1EP04732 61 aa3.5□□□□□ -1.85
RAD50-201ENST00000378823 PRM1P04553 51 aa3.49□□□□□ -1.85
RAD50-201ENST00000378823 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
RAD50-201ENST00000378823 MT3P25713 68 aa3.46□□□□□ -1.86
RAD50-201ENST00000378823 HYDINQ4G0P3 5121 aa3.44□□□□□ -1.86
RAD50-201ENST00000378823 MT4P47944 62 aa3.42□□□□□ -1.86
RAD50-201ENST00000378823 MT1MQ8N339 61 aa3.4□□□□□ -1.87
RAD50-201ENST00000378823 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
RAD50-201ENST00000378823 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
RAD50-201ENST00000378823 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
RAD50-201ENST00000378823 MUC17Q685J3 4493 aa3.31□□□□□ -1.88
RAD50-201ENST00000378823 KMT2CQ8NEZ4 4911 aaKnown RBP3.29□□□□□ -1.88
RAD50-201ENST00000378823 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
RAD50-201ENST00000378823 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
RAD50-201ENST00000378823 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
RAD50-201ENST00000378823 KIAA1109Q2LD37 5005 aa3.28□□□□□ -1.88
RAD50-201ENST00000378823 KRTAP19-6Q3LI70 58 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms