RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 AKAP9Q99996 3911 aa4.9□□□□□ -1.63
RPGR-203ENST00000378505 DNAH1Q9P2D7 4330 aa4.9□□□□□ -1.63
RPGR-203ENST00000378505 LORP23490 312 aaPredicted RBP4.89□□□□□ -1.63
RPGR-203ENST00000378505 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
RPGR-203ENST00000378505 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
RPGR-203ENST00000378505 DNHD1Q96M86 4753 aa4.87□□□□□ -1.63
RPGR-203ENST00000378505 DNAH10Q8IVF4 4471 aa4.86□□□□□ -1.63
RPGR-203ENST00000378505 VPS13DQ5THJ4 4388 aa4.81□□□□□ -1.64
RPGR-203ENST00000378505 KRTAP12-3P60328 96 aa4.81□□□□□ -1.64
RPGR-203ENST00000378505 DNAH17Q9UFH2 4485 aa4.8□□□□□ -1.64
RPGR-203ENST00000378505 INE1O15225 51 aa4.77□□□□□ -1.65
RPGR-203ENST00000378505 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
RPGR-203ENST00000378505 DYNC1H1Q14204 4646 aaKnown RBP4.75□□□□□ -1.65
RPGR-203ENST00000378505 FAT1Q14517 4588 aa4.75□□□□□ -1.65
RPGR-203ENST00000378505 KRTAP4-1Q9BYQ7 146 aa4.73□□□□□ -1.65
RPGR-203ENST00000378505 LRP1BQ9NZR2 4599 aa4.7□□□□□ -1.66
RPGR-203ENST00000378505 STARD9Q9P2P6 4700 aa4.69□□□□□ -1.66
RPGR-203ENST00000378505 DNAH8Q96JB1 4490 aa4.69□□□□□ -1.66
RPGR-203ENST00000378505 DNAH2Q9P225 4427 aa4.68□□□□□ -1.66
RPGR-203ENST00000378505 RYR1P21817 5038 aa4.66□□□□□ -1.66
RPGR-203ENST00000378505 SACSQ9NZJ4 4579 aa4.62□□□□□ -1.67
RPGR-203ENST00000378505 DYNC2H1Q8NCM8 4307 aaKnown RBP4.59□□□□□ -1.67
RPGR-203ENST00000378505 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
RPGR-203ENST00000378505 SPRR2GQ9BYE4 73 aa4.58□□□□□ -1.68
RPGR-203ENST00000378505 MT1HP80294 61 aa4.57□□□□□ -1.68
RPGR-203ENST00000378505 PRKDCP78527 4128 aaKnown RBP4.57□□□□□ -1.68
RPGR-203ENST00000378505 FAT2Q9NYQ8 4349 aa4.55□□□□□ -1.68
RPGR-203ENST00000378505 MT2AP02795 61 aa4.55□□□□□ -1.68
RPGR-203ENST00000378505 DNAH3Q8TD57 4116 aa4.54□□□□□ -1.68
RPGR-203ENST00000378505 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
RPGR-203ENST00000378505 KIAA1109Q2LD37 5005 aa4.5□□□□□ -1.69
RPGR-203ENST00000378505 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
RPGR-203ENST00000378505 KMT2AQ03164 3969 aa4.47□□□□□ -1.69
RPGR-203ENST00000378505 ANK2Q01484 3957 aa4.47□□□□□ -1.69
RPGR-203ENST00000378505 MT1FP04733 61 aa4.46□□□□□ -1.7
RPGR-203ENST00000378505 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
RPGR-203ENST00000378505 VPS13BQ7Z7G8 4022 aa4.45□□□□□ -1.7
RPGR-203ENST00000378505 LYSTQ99698 3801 aa4.43□□□□□ -1.7
RPGR-203ENST00000378505 RYR3Q15413 4870 aa4.4□□□□□ -1.71
RPGR-203ENST00000378505 KRTAP17-1Q9BYP8 105 aa4.39□□□□□ -1.71
RPGR-203ENST00000378505 LRP1Q07954 4544 aaKnown RBP4.35□□□□□ -1.71
RPGR-203ENST00000378505 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
RPGR-203ENST00000378505 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
RPGR-203ENST00000378505 RYR2Q92736 4967 aa4.31□□□□□ -1.72
RPGR-203ENST00000378505 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
RPGR-203ENST00000378505 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
RPGR-203ENST00000378505 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
RPGR-203ENST00000378505 CMYA5Q8N3K9 4069 aa4.27□□□□□ -1.73
RPGR-203ENST00000378505 DNAH6Q9C0G6 4158 aa4.24□□□□□ -1.73
RPGR-203ENST00000378505 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
RPGR-203ENST00000378505 HECTD4Q9Y4D8 3996 aa4.23□□□□□ -1.73
RPGR-203ENST00000378505 FRAS1Q86XX4 4008 aa4.22□□□□□ -1.73
RPGR-203ENST00000378505 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
RPGR-203ENST00000378505 HERC2O95714 4834 aa4.19□□□□□ -1.74
RPGR-203ENST00000378505 LRP2P98164 4655 aa4.19□□□□□ -1.74
RPGR-203ENST00000378505 DNAH7Q8WXX0 4024 aa4.19□□□□□ -1.74
RPGR-203ENST00000378505 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
RPGR-203ENST00000378505 MT1XP80297 61 aa4.15□□□□□ -1.75
RPGR-203ENST00000378505 MT1BP07438 61 aa4.13□□□□□ -1.75
RPGR-203ENST00000378505 KRTAP9-8Q9BYQ0 159 aa4.13□□□□□ -1.75
RPGR-203ENST00000378505 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
RPGR-203ENST00000378505 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
RPGR-203ENST00000378505 HYDINQ4G0P3 5121 aa4.09□□□□□ -1.76
RPGR-203ENST00000378505 PKD1P98161 4303 aa4.07□□□□□ -1.76
RPGR-203ENST00000378505 PKHD1P08F94 4074 aa4.05□□□□□ -1.76
RPGR-203ENST00000378505 SPRR5A0A1B0GTR4 108 aa4.05□□□□□ -1.76
RPGR-203ENST00000378505 HSPG2P98160 4391 aa4.04□□□□□ -1.76
RPGR-203ENST00000378505 KRTAP9-3Q9BYQ3 159 aa4.02□□□□□ -1.77
RPGR-203ENST00000378505 PCLOQ9Y6V0 5065 aa4.02□□□□□ -1.77
RPGR-203ENST00000378505 BIRC6Q9NR09 4857 aa4.01□□□□□ -1.77
RPGR-203ENST00000378505 HERC1Q15751 4861 aa4□□□□□ -1.77
RPGR-203ENST00000378505 KRTAP19-2Q3LHN2 52 aa3.98□□□□□ -1.77
RPGR-203ENST00000378505 KMT2CQ8NEZ4 4911 aaKnown RBP3.95□□□□□ -1.78
RPGR-203ENST00000378505 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
RPGR-203ENST00000378505 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
RPGR-203ENST00000378505 MUC17Q685J3 4493 aa3.9□□□□□ -1.78
RPGR-203ENST00000378505 LPAP08519 4548 aa3.89□□□□□ -1.79
RPGR-203ENST00000378505 MT1GP13640 62 aa3.87□□□□□ -1.79
RPGR-203ENST00000378505 LCE2BO14633 110 aa3.82□□□□□ -1.8
RPGR-203ENST00000378505 PKHD1L1Q86WI1 4243 aa3.82□□□□□ -1.8
RPGR-203ENST00000378505 FLGP20930 4061 aaPredicted RBP3.81□□□□□ -1.8
RPGR-203ENST00000378505 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
RPGR-203ENST00000378505 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
RPGR-203ENST00000378505 SPRR2EP22531 72 aa3.8□□□□□ -1.8
RPGR-203ENST00000378505 SPRR2BP35325 72 aa3.8□□□□□ -1.8
RPGR-203ENST00000378505 SPRR2AP35326 72 aa3.8□□□□□ -1.8
RPGR-203ENST00000378505 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
RPGR-203ENST00000378505 EPPK1P58107 5090 aaKnown RBP3.8□□□□□ -1.8
RPGR-203ENST00000378505 TNXBP22105 4242 aa3.79□□□□□ -1.8
RPGR-203ENST00000378505 MT1LQ93083 61 aa3.74□□□□□ -1.81
RPGR-203ENST00000378505 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
RPGR-203ENST00000378505 MT1EP04732 61 aa3.72□□□□□ -1.81
RPGR-203ENST00000378505 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
RPGR-203ENST00000378505 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
RPGR-203ENST00000378505 SPRR2DP22532 72 aa3.67□□□□□ -1.82
RPGR-203ENST00000378505 UBR4Q5T4S7 5183 aa3.66□□□□□ -1.82
RPGR-203ENST00000378505 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.82
RPGR-203ENST00000378505 FAT4Q6V0I7 4981 aa3.63□□□□□ -1.83
RPGR-203ENST00000378505 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
RPGR-203ENST00000378505 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms