RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 KRTAP10-5P60370 271 aa4.09□□□□□ -1.75
SPEN-201ENST00000375759 KRTAP10-4P60372 401 aaPredicted RBP4.09□□□□□ -1.75
SPEN-201ENST00000375759 DNAH2Q9P225 4427 aa4.07□□□□□ -1.76
SPEN-201ENST00000375759 ZNF469Q96JG9 3925 aaPredicted RBP4.06□□□□□ -1.76
SPEN-201ENST00000375759 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
SPEN-201ENST00000375759 DNAH1Q9P2D7 4330 aa4.02□□□□□ -1.77
SPEN-201ENST00000375759 DNAH3Q8TD57 4116 aa4□□□□□ -1.77
SPEN-201ENST00000375759 KRTAP8-1Q8IUC2 63 aa4□□□□□ -1.77
SPEN-201ENST00000375759 LYSTQ99698 3801 aa3.96□□□□□ -1.78
SPEN-201ENST00000375759 KRTAP4-5Q9BYR2 181 aa3.94□□□□□ -1.78
SPEN-201ENST00000375759 DNAH7Q8WXX0 4024 aa3.93□□□□□ -1.78
SPEN-201ENST00000375759 CMYA5Q8N3K9 4069 aa3.91□□□□□ -1.78
SPEN-201ENST00000375759 VPS13BQ7Z7G8 4022 aa3.89□□□□□ -1.79
SPEN-201ENST00000375759 ANK2Q01484 3957 aa3.88□□□□□ -1.79
SPEN-201ENST00000375759 HECTD4Q9Y4D8 3996 aa3.84□□□□□ -1.79
SPEN-201ENST00000375759 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
SPEN-201ENST00000375759 FRAS1Q86XX4 4008 aa3.82□□□□□ -1.8
SPEN-201ENST00000375759 KMT2AQ03164 3969 aa3.81□□□□□ -1.8
SPEN-201ENST00000375759 DNAH9Q9NYC9 4486 aa3.81□□□□□ -1.8
SPEN-201ENST00000375759 DNAH6Q9C0G6 4158 aa3.8□□□□□ -1.8
SPEN-201ENST00000375759 KRTAP19-4Q3LI73 84 aa3.79□□□□□ -1.8
SPEN-201ENST00000375759 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
SPEN-201ENST00000375759 DNAH10Q8IVF4 4471 aa3.78□□□□□ -1.8
SPEN-201ENST00000375759 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
SPEN-201ENST00000375759 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
SPEN-201ENST00000375759 MT1HP80294 61 aa3.73□□□□□ -1.81
SPEN-201ENST00000375759 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
SPEN-201ENST00000375759 FAT2Q9NYQ8 4349 aa3.7□□□□□ -1.82
SPEN-201ENST00000375759 KRTAP4-1Q9BYQ7 146 aa3.7□□□□□ -1.82
SPEN-201ENST00000375759 DNAH11Q96DT5 4516 aa3.7□□□□□ -1.82
SPEN-201ENST00000375759 MT2AP02795 61 aa3.69□□□□□ -1.82
SPEN-201ENST00000375759 DNAH5Q8TE73 4624 aa3.67□□□□□ -1.82
SPEN-201ENST00000375759 DYNC2H1Q8NCM8 4307 aaKnown RBP3.67□□□□□ -1.82
SPEN-201ENST00000375759 DNAH17Q9UFH2 4485 aa3.66□□□□□ -1.82
SPEN-201ENST00000375759 VPS13DQ5THJ4 4388 aa3.65□□□□□ -1.83
SPEN-201ENST00000375759 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.83
SPEN-201ENST00000375759 PLECQ15149 4684 aaKnown RBP3.63□□□□□ -1.83
SPEN-201ENST00000375759 MT1FP04733 61 aa3.6□□□□□ -1.83
SPEN-201ENST00000375759 PRKDCP78527 4128 aaKnown RBP3.59□□□□□ -1.83
SPEN-201ENST00000375759 STARD9Q9P2P6 4700 aa3.54□□□□□ -1.84
SPEN-201ENST00000375759 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
SPEN-201ENST00000375759 LCE3BQ5TA77 95 aa3.49□□□□□ -1.85
SPEN-201ENST00000375759 LRP1BQ9NZR2 4599 aa3.49□□□□□ -1.85
SPEN-201ENST00000375759 FLGP20930 4061 aaPredicted RBP3.48□□□□□ -1.85
SPEN-201ENST00000375759 KRTAP19-8Q3LI54 63 aa3.46□□□□□ -1.85
SPEN-201ENST00000375759 FAT1Q14517 4588 aa3.46□□□□□ -1.86
SPEN-201ENST00000375759 SPRR5A0A1B0GTR4 108 aa3.43□□□□□ -1.86
SPEN-201ENST00000375759 KRTAP19-1Q8IUB9 90 aa3.42□□□□□ -1.86
SPEN-201ENST00000375759 LRP1Q07954 4544 aaKnown RBP3.42□□□□□ -1.86
SPEN-201ENST00000375759 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
SPEN-201ENST00000375759 MT1XP80297 61 aa3.4□□□□□ -1.87
SPEN-201ENST00000375759 SACSQ9NZJ4 4579 aa3.39□□□□□ -1.87
SPEN-201ENST00000375759 SPRR2EP22531 72 aa3.39□□□□□ -1.87
SPEN-201ENST00000375759 SPRR2BP35325 72 aa3.39□□□□□ -1.87
SPEN-201ENST00000375759 SPRR2AP35326 72 aa3.39□□□□□ -1.87
SPEN-201ENST00000375759 DYNC1H1Q14204 4646 aaKnown RBP3.38□□□□□ -1.87
SPEN-201ENST00000375759 MT1GP13640 62 aa3.37□□□□□ -1.87
SPEN-201ENST00000375759 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
SPEN-201ENST00000375759 LCE2BO14633 110 aa3.32□□□□□ -1.88
SPEN-201ENST00000375759 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
SPEN-201ENST00000375759 PKHD1P08F94 4074 aa3.3□□□□□ -1.88
SPEN-201ENST00000375759 PKHD1L1Q86WI1 4243 aa3.3□□□□□ -1.88
SPEN-201ENST00000375759 SPRR2DP22532 72 aa3.29□□□□□ -1.88
SPEN-201ENST00000375759 MYCBP2O75592 4640 aa3.27□□□□□ -1.89
SPEN-201ENST00000375759 MT1BP07438 61 aa3.26□□□□□ -1.89
SPEN-201ENST00000375759 FAT3Q8TDW7 4589 aa3.23□□□□□ -1.89
SPEN-201ENST00000375759 PKD1P98161 4303 aa3.23□□□□□ -1.89
SPEN-201ENST00000375759 KRTAP9-8Q9BYQ0 159 aa3.22□□□□□ -1.89
SPEN-201ENST00000375759 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
SPEN-201ENST00000375759 KRTAP4-8Q9BYQ9 185 aa3.19□□□□□ -1.9
SPEN-201ENST00000375759 MT1LQ93083 61 aa3.19□□□□□ -1.9
SPEN-201ENST00000375759 KRTAP19-3Q7Z4W3 81 aa3.15□□□□□ -1.9
SPEN-201ENST00000375759 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
SPEN-201ENST00000375759 RYR1P21817 5038 aa3.14□□□□□ -1.91
SPEN-201ENST00000375759 TNXBP22105 4242 aa3.13□□□□□ -1.91
SPEN-201ENST00000375759 DNHD1Q96M86 4753 aa3.12□□□□□ -1.91
SPEN-201ENST00000375759 HSPG2P98160 4391 aa3.11□□□□□ -1.91
SPEN-201ENST00000375759 LCE2CQ5TA81 110 aa3.08□□□□□ -1.92
SPEN-201ENST00000375759 PRM1P04553 51 aa3.08□□□□□ -1.92
SPEN-201ENST00000375759 MT1EP04732 61 aa3.07□□□□□ -1.92
SPEN-201ENST00000375759 RYR3Q15413 4870 aa3.05□□□□□ -1.92
SPEN-201ENST00000375759 MT3P25713 68 aa3.04□□□□□ -1.92
SPEN-201ENST00000375759 KRTAP4-7Q9BYR0 210 aa3.03□□□□□ -1.92
SPEN-201ENST00000375759 LCE2DQ5TA82 110 aaPredicted RBP3.01□□□□□ -1.93
SPEN-201ENST00000375759 KRTAP17-1Q9BYP8 105 aa3□□□□□ -1.93
SPEN-201ENST00000375759 LRP2P98164 4655 aa2.99□□□□□ -1.93
SPEN-201ENST00000375759 MT1MQ8N339 61 aa2.98□□□□□ -1.93
SPEN-201ENST00000375759 LPAP08519 4548 aa2.96□□□□□ -1.94
SPEN-201ENST00000375759 LOC100996750A0A140TA64 210 aa2.9□□□□□ -1.94
SPEN-201ENST00000375759 MT4P47944 62 aa2.89□□□□□ -1.95
SPEN-201ENST00000375759 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
SPEN-201ENST00000375759 LCE1BQ5T7P3 118 aa2.87□□□□□ -1.95
SPEN-201ENST00000375759 KRTAP19-2Q3LHN2 52 aa2.86□□□□□ -1.95
SPEN-201ENST00000375759 KMT2CQ8NEZ4 4911 aaKnown RBP2.85□□□□□ -1.95
SPEN-201ENST00000375759 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
SPEN-201ENST00000375759 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
SPEN-201ENST00000375759 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
SPEN-201ENST00000375759 KRTAP19-6Q3LI70 58 aa2.84□□□□□ -1.95
SPEN-201ENST00000375759 RYR2Q92736 4967 aa2.83□□□□□ -1.96
SPEN-201ENST00000375759 MUC17Q685J3 4493 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms