RNA–Protein interactions for RNA: ENST00000375400.7

SVIL-203, Transcript of supervillin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SVIL, Length 6,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIL-203ENST00000375400 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
SVIL-203ENST00000375400 ZNF469Q96JG9 3925 aaPredicted RBP4.43□□□□□ -1.7
SVIL-203ENST00000375400 CSMD3Q7Z407 3707 aa4.41□□□□□ -1.7
SVIL-203ENST00000375400 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
SVIL-203ENST00000375400 KRTAP4-5Q9BYR2 181 aa4.4□□□□□ -1.7
SVIL-203ENST00000375400 DNAH17Q9UFH2 4485 aa4.4□□□□□ -1.7
SVIL-203ENST00000375400 LORP23490 312 aaPredicted RBP4.39□□□□□ -1.71
SVIL-203ENST00000375400 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
SVIL-203ENST00000375400 DNAH2Q9P225 4427 aa4.37□□□□□ -1.71
SVIL-203ENST00000375400 DNAH8Q96JB1 4490 aa4.37□□□□□ -1.71
SVIL-203ENST00000375400 MEGF8Q7Z7M0 2845 aa4.36□□□□□ -1.71
SVIL-203ENST00000375400 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
SVIL-203ENST00000375400 PLECQ15149 4684 aaKnown RBP4.33□□□□□ -1.72
SVIL-203ENST00000375400 COL7A1Q02388 2944 aa4.33□□□□□ -1.72
SVIL-203ENST00000375400 VPS13DQ5THJ4 4388 aa4.33□□□□□ -1.72
SVIL-203ENST00000375400 ANK2Q01484 3957 aa4.31□□□□□ -1.72
SVIL-203ENST00000375400 FRAS1Q86XX4 4008 aa4.29□□□□□ -1.72
SVIL-203ENST00000375400 CMYA5Q8N3K9 4069 aa4.25□□□□□ -1.73
SVIL-203ENST00000375400 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.74
SVIL-203ENST00000375400 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
SVIL-203ENST00000375400 DNAH5Q8TE73 4624 aa4.16□□□□□ -1.74
SVIL-203ENST00000375400 SACSQ9NZJ4 4579 aa4.16□□□□□ -1.74
SVIL-203ENST00000375400 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.74
SVIL-203ENST00000375400 STARD9Q9P2P6 4700 aa4.14□□□□□ -1.75
SVIL-203ENST00000375400 HECTD4Q9Y4D8 3996 aa4.1□□□□□ -1.75
SVIL-203ENST00000375400 PRKDCP78527 4128 aaKnown RBP4.1□□□□□ -1.75
SVIL-203ENST00000375400 VPS13BQ7Z7G8 4022 aa4.09□□□□□ -1.75
SVIL-203ENST00000375400 DNAH7Q8WXX0 4024 aa4.09□□□□□ -1.75
SVIL-203ENST00000375400 FAT2Q9NYQ8 4349 aa4.08□□□□□ -1.76
SVIL-203ENST00000375400 KMT2AQ03164 3969 aa4.07□□□□□ -1.76
SVIL-203ENST00000375400 KRTAP4-1Q9BYQ7 146 aa4.05□□□□□ -1.76
SVIL-203ENST00000375400 LYSTQ99698 3801 aa4.05□□□□□ -1.76
SVIL-203ENST00000375400 LRP1BQ9NZR2 4599 aa4.04□□□□□ -1.76
SVIL-203ENST00000375400 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
SVIL-203ENST00000375400 DYNC1H1Q14204 4646 aaKnown RBP4□□□□□ -1.77
SVIL-203ENST00000375400 MT1HP80294 61 aa3.96□□□□□ -1.78
SVIL-203ENST00000375400 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
SVIL-203ENST00000375400 SPRR2FQ96RM1 72 aa3.93□□□□□ -1.78
SVIL-203ENST00000375400 APOBP04114 4563 aaKnown RBP3.89□□□□□ -1.79
SVIL-203ENST00000375400 FAT1Q14517 4588 aa3.88□□□□□ -1.79
SVIL-203ENST00000375400 FAT3Q8TDW7 4589 aa3.87□□□□□ -1.79
SVIL-203ENST00000375400 MT2AP02795 61 aa3.86□□□□□ -1.79
SVIL-203ENST00000375400 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
SVIL-203ENST00000375400 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
SVIL-203ENST00000375400 KRTAP19-5Q3LI72 72 aa3.84□□□□□ -1.8
SVIL-203ENST00000375400 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
SVIL-203ENST00000375400 LCE3BQ5TA77 95 aa3.8□□□□□ -1.8
SVIL-203ENST00000375400 DNHD1Q96M86 4753 aa3.79□□□□□ -1.8
SVIL-203ENST00000375400 SPRR2EP22531 72 aa3.78□□□□□ -1.8
SVIL-203ENST00000375400 SPRR2BP35325 72 aa3.78□□□□□ -1.8
SVIL-203ENST00000375400 SPRR2AP35326 72 aa3.78□□□□□ -1.8
SVIL-203ENST00000375400 MT1FP04733 61 aa3.78□□□□□ -1.8
SVIL-203ENST00000375400 PKHD1P08F94 4074 aa3.72□□□□□ -1.81
SVIL-203ENST00000375400 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
SVIL-203ENST00000375400 PKD1P98161 4303 aa3.71□□□□□ -1.82
SVIL-203ENST00000375400 LRP1Q07954 4544 aaKnown RBP3.7□□□□□ -1.82
SVIL-203ENST00000375400 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
SVIL-203ENST00000375400 SPRR2DP22532 72 aa3.67□□□□□ -1.82
SVIL-203ENST00000375400 KRTAP19-1Q8IUB9 90 aa3.67□□□□□ -1.82
SVIL-203ENST00000375400 TNXBP22105 4242 aa3.67□□□□□ -1.82
SVIL-203ENST00000375400 KRTAP17-1Q9BYP8 105 aa3.65□□□□□ -1.83
SVIL-203ENST00000375400 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
SVIL-203ENST00000375400 RYR1P21817 5038 aa3.64□□□□□ -1.83
SVIL-203ENST00000375400 KRTAP19-8Q3LI54 63 aa3.63□□□□□ -1.83
SVIL-203ENST00000375400 MT1XP80297 61 aa3.62□□□□□ -1.83
SVIL-203ENST00000375400 MT1GP13640 62 aa3.6□□□□□ -1.83
SVIL-203ENST00000375400 HSPG2P98160 4391 aa3.59□□□□□ -1.83
SVIL-203ENST00000375400 HYDINQ4G0P3 5121 aa3.59□□□□□ -1.84
SVIL-203ENST00000375400 LCE2BO14633 110 aa3.55□□□□□ -1.84
SVIL-203ENST00000375400 MT1BP07438 61 aa3.53□□□□□ -1.84
SVIL-203ENST00000375400 LPAP08519 4548 aa3.51□□□□□ -1.85
SVIL-203ENST00000375400 RYR3Q15413 4870 aa3.51□□□□□ -1.85
SVIL-203ENST00000375400 HERC1Q15751 4861 aa3.5□□□□□ -1.85
SVIL-203ENST00000375400 BIRC6Q9NR09 4857 aa3.49□□□□□ -1.85
SVIL-203ENST00000375400 RYR2Q92736 4967 aa3.48□□□□□ -1.85
SVIL-203ENST00000375400 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
SVIL-203ENST00000375400 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.86
SVIL-203ENST00000375400 KRTAP9-8Q9BYQ0 159 aa3.45□□□□□ -1.86
SVIL-203ENST00000375400 LCE2CQ5TA81 110 aa3.45□□□□□ -1.86
SVIL-203ENST00000375400 LCE2DQ5TA82 110 aaPredicted RBP3.42□□□□□ -1.86
SVIL-203ENST00000375400 LRP2P98164 4655 aa3.41□□□□□ -1.86
SVIL-203ENST00000375400 KRTAP19-2Q3LHN2 52 aa3.4□□□□□ -1.86
SVIL-203ENST00000375400 KRTAP4-8A0A0G2JLE6 195 aa3.39□□□□□ -1.87
SVIL-203ENST00000375400 KRTAP4-8Q9BYQ9 185 aa3.39□□□□□ -1.87
SVIL-203ENST00000375400 KIAA1109Q2LD37 5005 aa3.39□□□□□ -1.87
SVIL-203ENST00000375400 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
SVIL-203ENST00000375400 HERC2O95714 4834 aa3.37□□□□□ -1.87
SVIL-203ENST00000375400 PRM1P04553 51 aa3.37□□□□□ -1.87
SVIL-203ENST00000375400 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
SVIL-203ENST00000375400 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
SVIL-203ENST00000375400 KRTAP9-3Q9BYQ3 159 aa3.36□□□□□ -1.87
SVIL-203ENST00000375400 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
SVIL-203ENST00000375400 KMT2CQ8NEZ4 4911 aaKnown RBP3.33□□□□□ -1.88
SVIL-203ENST00000375400 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
SVIL-203ENST00000375400 MT4P47944 62 aa3.3□□□□□ -1.88
SVIL-203ENST00000375400 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
SVIL-203ENST00000375400 MT1LQ93083 61 aa3.26□□□□□ -1.89
SVIL-203ENST00000375400 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
SVIL-203ENST00000375400 MT1EP04732 61 aa3.2□□□□□ -1.9
SVIL-203ENST00000375400 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms