RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 DNAH11Q96DT5 4516 aa8.82□□□□□ -1
TGFBR1-202ENST00000374994 DNAH10Q8IVF4 4471 aa8.81□□□□□ -1
TGFBR1-202ENST00000374994 DNAH9Q9NYC9 4486 aa8.81□□□□□ -1
TGFBR1-202ENST00000374994 DNAH2Q9P225 4427 aa8.78□□□□□ -1
TGFBR1-202ENST00000374994 VPS13CQ709C8 3753 aa8.71□□□□□ -1.02
TGFBR1-202ENST00000374994 DNAH1Q9P2D7 4330 aa8.71□□□□□ -1.02
TGFBR1-202ENST00000374994 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
TGFBR1-202ENST00000374994 PLECQ15149 4684 aaKnown RBP8.62□□□□□ -1.03
TGFBR1-202ENST00000374994 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.03
TGFBR1-202ENST00000374994 KRTAP4-1Q9BYQ7 146 aa8.55□□□□□ -1.04
TGFBR1-202ENST00000374994 SPRR2GQ9BYE4 73 aa8.51□□□□□ -1.05
TGFBR1-202ENST00000374994 CRCT1Q9UGL9 99 aa8.49□□□□□ -1.05
TGFBR1-202ENST00000374994 DYNC1H1Q14204 4646 aaKnown RBP8.44□□□□□ -1.06
TGFBR1-202ENST00000374994 AKAP9Q99996 3911 aa8.42□□□□□ -1.06
TGFBR1-202ENST00000374994 SACSQ9NZJ4 4579 aa8.4□□□□□ -1.07
TGFBR1-202ENST00000374994 CSMD3Q7Z407 3707 aa8.35□□□□□ -1.07
TGFBR1-202ENST00000374994 FAT1Q14517 4588 aa8.35□□□□□ -1.07
TGFBR1-202ENST00000374994 MT2AP02795 61 aa8.32□□□□□ -1.08
TGFBR1-202ENST00000374994 MT1HP80294 61 aa8.32□□□□□ -1.08
TGFBR1-202ENST00000374994 DNAH8Q96JB1 4490 aa8.28□□□□□ -1.08
TGFBR1-202ENST00000374994 KRTAP8-1Q8IUC2 63 aa8.28□□□□□ -1.08
TGFBR1-202ENST00000374994 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
TGFBR1-202ENST00000374994 ZNF469Q96JG9 3925 aaPredicted RBP8.22□□□□□ -1.09
TGFBR1-202ENST00000374994 DYNC2H1Q8NCM8 4307 aaKnown RBP8.21□□□□□ -1.1
TGFBR1-202ENST00000374994 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
TGFBR1-202ENST00000374994 DNAH3Q8TD57 4116 aa8.2□□□□□ -1.1
TGFBR1-202ENST00000374994 KRTAP19-4Q3LI73 84 aa8.18□□□□□ -1.1
TGFBR1-202ENST00000374994 DNHD1Q96M86 4753 aa8.16□□□□□ -1.1
TGFBR1-202ENST00000374994 STARD9Q9P2P6 4700 aa8.15□□□□□ -1.1
TGFBR1-202ENST00000374994 MT1FP04733 61 aa8.12□□□□□ -1.11
TGFBR1-202ENST00000374994 RYR1P21817 5038 aa8.09□□□□□ -1.11
TGFBR1-202ENST00000374994 APOBP04114 4563 aaKnown RBP8.07□□□□□ -1.12
TGFBR1-202ENST00000374994 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
TGFBR1-202ENST00000374994 LCE3CQ5T5A8 94 aa8.04□□□□□ -1.12
TGFBR1-202ENST00000374994 KRTAP19-5Q3LI72 72 aa8□□□□□ -1.13
TGFBR1-202ENST00000374994 KRTAP19-8Q3LI54 63 aa7.94□□□□□ -1.14
TGFBR1-202ENST00000374994 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
TGFBR1-202ENST00000374994 SPRR5A0A1B0GTR4 108 aa7.88□□□□□ -1.15
TGFBR1-202ENST00000374994 ANK2Q01484 3957 aa7.82□□□□□ -1.16
TGFBR1-202ENST00000374994 RYR2Q92736 4967 aa7.78□□□□□ -1.16
TGFBR1-202ENST00000374994 RYR3Q15413 4870 aa7.78□□□□□ -1.16
TGFBR1-202ENST00000374994 DNAH6Q9C0G6 4158 aa7.71□□□□□ -1.17
TGFBR1-202ENST00000374994 VPS13BQ7Z7G8 4022 aa7.71□□□□□ -1.18
TGFBR1-202ENST00000374994 KIAA1109Q2LD37 5005 aa7.7□□□□□ -1.18
TGFBR1-202ENST00000374994 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
TGFBR1-202ENST00000374994 LRP1Q07954 4544 aaKnown RBP7.67□□□□□ -1.18
TGFBR1-202ENST00000374994 FAT3Q8TDW7 4589 aa7.67□□□□□ -1.18
TGFBR1-202ENST00000374994 MT1XP80297 61 aa7.65□□□□□ -1.18
TGFBR1-202ENST00000374994 PRKDCP78527 4128 aaKnown RBP7.64□□□□□ -1.19
TGFBR1-202ENST00000374994 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
TGFBR1-202ENST00000374994 HERC1Q15751 4861 aa7.63□□□□□ -1.19
TGFBR1-202ENST00000374994 CMYA5Q8N3K9 4069 aa7.61□□□□□ -1.19
TGFBR1-202ENST00000374994 KRTAP17-1Q9BYP8 105 aa7.6□□□□□ -1.19
TGFBR1-202ENST00000374994 HSPG2P98160 4391 aa7.58□□□□□ -1.2
TGFBR1-202ENST00000374994 MT1BP07438 61 aa7.56□□□□□ -1.2
TGFBR1-202ENST00000374994 KMT2AQ03164 3969 aa7.55□□□□□ -1.2
TGFBR1-202ENST00000374994 SPRR2FQ96RM1 72 aa7.51□□□□□ -1.21
TGFBR1-202ENST00000374994 DNAH7Q8WXX0 4024 aa7.5□□□□□ -1.21
TGFBR1-202ENST00000374994 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
TGFBR1-202ENST00000374994 HECTD4Q9Y4D8 3996 aa7.42□□□□□ -1.22
TGFBR1-202ENST00000374994 LYSTQ99698 3801 aa7.37□□□□□ -1.23
TGFBR1-202ENST00000374994 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
TGFBR1-202ENST00000374994 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
TGFBR1-202ENST00000374994 FRAS1Q86XX4 4008 aa7.27□□□□□ -1.25
TGFBR1-202ENST00000374994 KRTAP12-4P60329 112 aa7.26□□□□□ -1.25
TGFBR1-202ENST00000374994 PKD1P98161 4303 aa7.21□□□□□ -1.26
TGFBR1-202ENST00000374994 MT1GP13640 62 aa7.19□□□□□ -1.26
TGFBR1-202ENST00000374994 KRTAP19-2Q3LHN2 52 aa7.17□□□□□ -1.26
TGFBR1-202ENST00000374994 HERC2O95714 4834 aa7.16□□□□□ -1.26
TGFBR1-202ENST00000374994 LRP2P98164 4655 aa7.14□□□□□ -1.27
TGFBR1-202ENST00000374994 LCE3BQ5TA77 95 aa7.13□□□□□ -1.27
TGFBR1-202ENST00000374994 KRTAP4-8A0A0G2JLE6 195 aa7.12□□□□□ -1.27
TGFBR1-202ENST00000374994 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
TGFBR1-202ENST00000374994 BIRC6Q9NR09 4857 aa7.04□□□□□ -1.28
TGFBR1-202ENST00000374994 HYDINQ4G0P3 5121 aa7.03□□□□□ -1.28
TGFBR1-202ENST00000374994 PCLOQ9Y6V0 5065 aa7.02□□□□□ -1.29
TGFBR1-202ENST00000374994 MUC17Q685J3 4493 aa7.01□□□□□ -1.29
TGFBR1-202ENST00000374994 MT1LQ93083 61 aa6.96□□□□□ -1.3
TGFBR1-202ENST00000374994 LCE3DQ9BYE3 92 aa6.96□□□□□ -1.3
TGFBR1-202ENST00000374994 SPRR2EP22531 72 aa6.93□□□□□ -1.3
TGFBR1-202ENST00000374994 SPRR2BP35325 72 aa6.93□□□□□ -1.3
TGFBR1-202ENST00000374994 SPRR2AP35326 72 aa6.93□□□□□ -1.3
TGFBR1-202ENST00000374994 LCE3EQ5T5B0 92 aa6.92□□□□□ -1.3
TGFBR1-202ENST00000374994 PKHD1L1Q86WI1 4243 aa6.91□□□□□ -1.3
TGFBR1-202ENST00000374994 KRTAP19-3Q7Z4W3 81 aa6.88□□□□□ -1.31
TGFBR1-202ENST00000374994 MT1EP04732 61 aa6.88□□□□□ -1.31
TGFBR1-202ENST00000374994 KMT2CQ8NEZ4 4911 aaKnown RBP6.86□□□□□ -1.31
TGFBR1-202ENST00000374994 LCE2BO14633 110 aa6.81□□□□□ -1.32
TGFBR1-202ENST00000374994 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
TGFBR1-202ENST00000374994 FLGP20930 4061 aaPredicted RBP6.77□□□□□ -1.33
TGFBR1-202ENST00000374994 PKHD1P08F94 4074 aa6.73□□□□□ -1.33
TGFBR1-202ENST00000374994 SPRR2DP22532 72 aa6.72□□□□□ -1.33
TGFBR1-202ENST00000374994 TNXBP22105 4242 aa6.71□□□□□ -1.34
TGFBR1-202ENST00000374994 ABCA13Q86UQ4 5058 aa6.68□□□□□ -1.34
TGFBR1-202ENST00000374994 LPAP08519 4548 aa6.65□□□□□ -1.35
TGFBR1-202ENST00000374994 MT1MQ8N339 61 aa6.61□□□□□ -1.35
TGFBR1-202ENST00000374994 EPPK1P58107 5090 aaKnown RBP6.57□□□□□ -1.36
TGFBR1-202ENST00000374994 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
TGFBR1-202ENST00000374994 KRTAP2-3P0C7H8 128 aa6.49□□□□□ -1.37
TGFBR1-202ENST00000374994 KRTAP2-4Q9BYR9 128 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms