RNA–Protein interactions for RNA: ENST00000374566.7

EPB41L4B-202, Transcript of erythrocyte membrane protein band 4.1 like 4B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene EPB41L4B, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L4B-202ENST00000374566 CSMD3Q7Z407 3707 aa9.9□□□□□ -0.82
EPB41L4B-202ENST00000374566 KRTAP23-1A1A580 65 aa9.84□□□□□ -0.83
EPB41L4B-202ENST00000374566 DNAH9Q9NYC9 4486 aa9.82□□□□□ -0.84
EPB41L4B-202ENST00000374566 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
EPB41L4B-202ENST00000374566 KRTAP8-1Q8IUC2 63 aa9.77□□□□□ -0.85
EPB41L4B-202ENST00000374566 KRTAP4-1Q9BYQ7 146 aa9.67□□□□□ -0.86
EPB41L4B-202ENST00000374566 DNAH1Q9P2D7 4330 aa9.64□□□□□ -0.87
EPB41L4B-202ENST00000374566 KRTAP10-5P60370 271 aa9.63□□□□□ -0.87
EPB41L4B-202ENST00000374566 MT1HP80294 61 aa9.55□□□□□ -0.88
EPB41L4B-202ENST00000374566 DNAH10Q8IVF4 4471 aa9.55□□□□□ -0.88
EPB41L4B-202ENST00000374566 PLECQ15149 4684 aaKnown RBP9.52□□□□□ -0.89
EPB41L4B-202ENST00000374566 AKAP9Q99996 3911 aa9.52□□□□□ -0.89
EPB41L4B-202ENST00000374566 ZNF469Q96JG9 3925 aaPredicted RBP9.48□□□□□ -0.89
EPB41L4B-202ENST00000374566 DNAH11Q96DT5 4516 aa9.43□□□□□ -0.9
EPB41L4B-202ENST00000374566 MT2AP02795 61 aa9.39□□□□□ -0.91
EPB41L4B-202ENST00000374566 DNAH2Q9P225 4427 aa9.32□□□□□ -0.92
EPB41L4B-202ENST00000374566 DNAH17Q9UFH2 4485 aa9.28□□□□□ -0.92
EPB41L4B-202ENST00000374566 DNHD1Q96M86 4753 aa9.26□□□□□ -0.93
EPB41L4B-202ENST00000374566 VPS13DQ5THJ4 4388 aa9.25□□□□□ -0.93
EPB41L4B-202ENST00000374566 SPRR2GQ9BYE4 73 aa9.24□□□□□ -0.93
EPB41L4B-202ENST00000374566 DYNC1H1Q14204 4646 aaKnown RBP9.23□□□□□ -0.93
EPB41L4B-202ENST00000374566 MT1FP04733 61 aa9.22□□□□□ -0.93
EPB41L4B-202ENST00000374566 FAT1Q14517 4588 aa9.19□□□□□ -0.94
EPB41L4B-202ENST00000374566 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
EPB41L4B-202ENST00000374566 SPRR2FQ96RM1 72 aa9.12□□□□□ -0.95
EPB41L4B-202ENST00000374566 KRTAP19-5Q3LI72 72 aa9.09□□□□□ -0.95
EPB41L4B-202ENST00000374566 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
EPB41L4B-202ENST00000374566 RYR1P21817 5038 aa9.06□□□□□ -0.96
EPB41L4B-202ENST00000374566 STARD9Q9P2P6 4700 aa9.04□□□□□ -0.96
EPB41L4B-202ENST00000374566 DNAH3Q8TD57 4116 aa9.03□□□□□ -0.96
EPB41L4B-202ENST00000374566 SACSQ9NZJ4 4579 aa9.01□□□□□ -0.97
EPB41L4B-202ENST00000374566 KRTAP10-7P60409 375 aaPredicted RBP8.99□□□□□ -0.97
EPB41L4B-202ENST00000374566 DNAH8Q96JB1 4490 aa8.98□□□□□ -0.97
EPB41L4B-202ENST00000374566 DYNC2H1Q8NCM8 4307 aaKnown RBP8.96□□□□□ -0.98
EPB41L4B-202ENST00000374566 ANK2Q01484 3957 aa8.88□□□□□ -0.99
EPB41L4B-202ENST00000374566 LCE3CQ5T5A8 94 aa8.88□□□□□ -0.99
EPB41L4B-202ENST00000374566 APOBP04114 4563 aaKnown RBP8.82□□□□□ -1
EPB41L4B-202ENST00000374566 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
EPB41L4B-202ENST00000374566 KMT2AQ03164 3969 aa8.74□□□□□ -1.01
EPB41L4B-202ENST00000374566 PRKDCP78527 4128 aaKnown RBP8.71□□□□□ -1.01
EPB41L4B-202ENST00000374566 RYR3Q15413 4870 aa8.64□□□□□ -1.03
EPB41L4B-202ENST00000374566 KRTAP17-1Q9BYP8 105 aa8.64□□□□□ -1.03
EPB41L4B-202ENST00000374566 LYSTQ99698 3801 aa8.59□□□□□ -1.03
EPB41L4B-202ENST00000374566 KRTAP19-1Q8IUB9 90 aa8.56□□□□□ -1.04
EPB41L4B-202ENST00000374566 SPRR2EP22531 72 aa8.56□□□□□ -1.04
EPB41L4B-202ENST00000374566 SPRR2BP35325 72 aa8.56□□□□□ -1.04
EPB41L4B-202ENST00000374566 SPRR2AP35326 72 aa8.56□□□□□ -1.04
EPB41L4B-202ENST00000374566 KRTAP19-8Q3LI54 63 aa8.52□□□□□ -1.05
EPB41L4B-202ENST00000374566 DNAH7Q8WXX0 4024 aa8.47□□□□□ -1.05
EPB41L4B-202ENST00000374566 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
EPB41L4B-202ENST00000374566 MYCBP2O75592 4640 aa8.45□□□□□ -1.06
EPB41L4B-202ENST00000374566 FRAS1Q86XX4 4008 aa8.44□□□□□ -1.06
EPB41L4B-202ENST00000374566 MT1XP80297 61 aa8.42□□□□□ -1.06
EPB41L4B-202ENST00000374566 KRTAP19-4Q3LI73 84 aa8.41□□□□□ -1.06
EPB41L4B-202ENST00000374566 LCE3BQ5TA77 95 aa8.39□□□□□ -1.07
EPB41L4B-202ENST00000374566 DNAH6Q9C0G6 4158 aa8.35□□□□□ -1.07
EPB41L4B-202ENST00000374566 MT1GP13640 62 aa8.33□□□□□ -1.08
EPB41L4B-202ENST00000374566 KIAA1109Q2LD37 5005 aa8.32□□□□□ -1.08
EPB41L4B-202ENST00000374566 MT1BP07438 61 aa8.31□□□□□ -1.08
EPB41L4B-202ENST00000374566 LRP1Q07954 4544 aaKnown RBP8.28□□□□□ -1.08
EPB41L4B-202ENST00000374566 CMYA5Q8N3K9 4069 aa8.27□□□□□ -1.09
EPB41L4B-202ENST00000374566 SPRR2DP22532 72 aa8.27□□□□□ -1.09
EPB41L4B-202ENST00000374566 KRTAP9-8Q9BYQ0 159 aa8.27□□□□□ -1.09
EPB41L4B-202ENST00000374566 KRTAP4-8A0A0G2JLE6 195 aa8.24□□□□□ -1.09
EPB41L4B-202ENST00000374566 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
EPB41L4B-202ENST00000374566 RYR2Q92736 4967 aa8.23□□□□□ -1.09
EPB41L4B-202ENST00000374566 LCE2BO14633 110 aa8.19□□□□□ -1.1
EPB41L4B-202ENST00000374566 HECTD4Q9Y4D8 3996 aa8.14□□□□□ -1.11
EPB41L4B-202ENST00000374566 KRTAP9-3Q9BYQ3 159 aa8.09□□□□□ -1.11
EPB41L4B-202ENST00000374566 LCE2CQ5TA81 110 aa8.07□□□□□ -1.12
EPB41L4B-202ENST00000374566 KRTAP12-4P60329 112 aa8.06□□□□□ -1.12
EPB41L4B-202ENST00000374566 HERC1Q15751 4861 aa8.04□□□□□ -1.12
EPB41L4B-202ENST00000374566 HSPG2P98160 4391 aa7.97□□□□□ -1.13
EPB41L4B-202ENST00000374566 HERC2O95714 4834 aa7.96□□□□□ -1.14
EPB41L4B-202ENST00000374566 PKD1P98161 4303 aa7.95□□□□□ -1.14
EPB41L4B-202ENST00000374566 LRP2P98164 4655 aa7.87□□□□□ -1.15
EPB41L4B-202ENST00000374566 LPAP08519 4548 aa7.84□□□□□ -1.15
EPB41L4B-202ENST00000374566 BIRC6Q9NR09 4857 aa7.84□□□□□ -1.15
EPB41L4B-202ENST00000374566 PCLOQ9Y6V0 5065 aa7.83□□□□□ -1.16
EPB41L4B-202ENST00000374566 PKHD1L1Q86WI1 4243 aa7.83□□□□□ -1.16
EPB41L4B-202ENST00000374566 HYDINQ4G0P3 5121 aa7.83□□□□□ -1.16
EPB41L4B-202ENST00000374566 LCE3DQ9BYE3 92 aa7.81□□□□□ -1.16
EPB41L4B-202ENST00000374566 KRTAP4-7Q9BYR0 210 aa7.78□□□□□ -1.16
EPB41L4B-202ENST00000374566 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
EPB41L4B-202ENST00000374566 KRTAP19-3Q7Z4W3 81 aa7.74□□□□□ -1.17
EPB41L4B-202ENST00000374566 LCE3EQ5T5B0 92 aa7.65□□□□□ -1.18
EPB41L4B-202ENST00000374566 MT1LQ93083 61 aa7.65□□□□□ -1.18
EPB41L4B-202ENST00000374566 PKHD1P08F94 4074 aa7.64□□□□□ -1.19
EPB41L4B-202ENST00000374566 MT1EP04732 61 aa7.59□□□□□ -1.19
EPB41L4B-202ENST00000374566 KRTAP19-2Q3LHN2 52 aa7.59□□□□□ -1.19
EPB41L4B-202ENST00000374566 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
EPB41L4B-202ENST00000374566 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
EPB41L4B-202ENST00000374566 TNXBP22105 4242 aa7.46□□□□□ -1.21
EPB41L4B-202ENST00000374566 MT4P47944 62 aa7.4□□□□□ -1.22
EPB41L4B-202ENST00000374566 EPPK1P58107 5090 aaKnown RBP7.38□□□□□ -1.23
EPB41L4B-202ENST00000374566 MT1MQ8N339 61 aa7.38□□□□□ -1.23
EPB41L4B-202ENST00000374566 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
EPB41L4B-202ENST00000374566 FLGP20930 4061 aaPredicted RBP7.34□□□□□ -1.24
EPB41L4B-202ENST00000374566 KRTAP9-2Q9BYQ4 174 aa7.3□□□□□ -1.24
EPB41L4B-202ENST00000374566 KRTAP4-3Q9BYR4 195 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms