RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 HUWE1Q7Z6Z7 4374 aaKnown RBP4.07□□□□□ -1.76
SPTAN1-203ENST00000372739 KRTAP8-1Q8IUC2 63 aa4.03□□□□□ -1.76
SPTAN1-203ENST00000372739 LCE3AQ5TA76 89 aa4.03□□□□□ -1.76
SPTAN1-203ENST00000372739 KRTAP4-5Q9BYR2 181 aa4.03□□□□□ -1.76
SPTAN1-203ENST00000372739 LORP23490 312 aaPredicted RBP4.02□□□□□ -1.77
SPTAN1-203ENST00000372739 DNAH1Q9P2D7 4330 aa3.96□□□□□ -1.78
SPTAN1-203ENST00000372739 LYSTQ99698 3801 aa3.93□□□□□ -1.78
SPTAN1-203ENST00000372739 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
SPTAN1-203ENST00000372739 ANK2Q01484 3957 aa3.92□□□□□ -1.78
SPTAN1-203ENST00000372739 DNAH9Q9NYC9 4486 aa3.89□□□□□ -1.79
SPTAN1-203ENST00000372739 DNAH6Q9C0G6 4158 aa3.81□□□□□ -1.8
SPTAN1-203ENST00000372739 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
SPTAN1-203ENST00000372739 FRAS1Q86XX4 4008 aa3.79□□□□□ -1.8
SPTAN1-203ENST00000372739 CMYA5Q8N3K9 4069 aa3.76□□□□□ -1.81
SPTAN1-203ENST00000372739 MT1HP80294 61 aa3.75□□□□□ -1.81
SPTAN1-203ENST00000372739 DNAH11Q96DT5 4516 aa3.74□□□□□ -1.81
SPTAN1-203ENST00000372739 DNAH3Q8TD57 4116 aa3.74□□□□□ -1.81
SPTAN1-203ENST00000372739 DNAH10Q8IVF4 4471 aa3.74□□□□□ -1.81
SPTAN1-203ENST00000372739 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
SPTAN1-203ENST00000372739 DNAH2Q9P225 4427 aa3.73□□□□□ -1.81
SPTAN1-203ENST00000372739 SPRR2GQ9BYE4 73 aa3.71□□□□□ -1.82
SPTAN1-203ENST00000372739 VPS13DQ5THJ4 4388 aa3.7□□□□□ -1.82
SPTAN1-203ENST00000372739 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
SPTAN1-203ENST00000372739 DYNC2H1Q8NCM8 4307 aaKnown RBP3.68□□□□□ -1.82
SPTAN1-203ENST00000372739 MT2AP02795 61 aa3.67□□□□□ -1.82
SPTAN1-203ENST00000372739 DNAH7Q8WXX0 4024 aa3.66□□□□□ -1.82
SPTAN1-203ENST00000372739 KMT2AQ03164 3969 aa3.66□□□□□ -1.82
SPTAN1-203ENST00000372739 PRKDCP78527 4128 aaKnown RBP3.64□□□□□ -1.83
SPTAN1-203ENST00000372739 PLECQ15149 4684 aaKnown RBP3.62□□□□□ -1.83
SPTAN1-203ENST00000372739 FAT2Q9NYQ8 4349 aa3.62□□□□□ -1.83
SPTAN1-203ENST00000372739 DNHD1Q96M86 4753 aa3.61□□□□□ -1.83
SPTAN1-203ENST00000372739 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
SPTAN1-203ENST00000372739 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
SPTAN1-203ENST00000372739 DNAH5Q8TE73 4624 aa3.6□□□□□ -1.83
SPTAN1-203ENST00000372739 SPRR2EP22531 72 aa3.6□□□□□ -1.83
SPTAN1-203ENST00000372739 SPRR2BP35325 72 aa3.6□□□□□ -1.83
SPTAN1-203ENST00000372739 SPRR2AP35326 72 aa3.6□□□□□ -1.83
SPTAN1-203ENST00000372739 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
SPTAN1-203ENST00000372739 DNAH17Q9UFH2 4485 aa3.58□□□□□ -1.84
SPTAN1-203ENST00000372739 MT1FP04733 61 aa3.57□□□□□ -1.84
SPTAN1-203ENST00000372739 DYNC1H1Q14204 4646 aaKnown RBP3.55□□□□□ -1.84
SPTAN1-203ENST00000372739 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
SPTAN1-203ENST00000372739 STARD9Q9P2P6 4700 aa3.53□□□□□ -1.84
SPTAN1-203ENST00000372739 SPRR2DP22532 72 aa3.5□□□□□ -1.85
SPTAN1-203ENST00000372739 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
SPTAN1-203ENST00000372739 LRP1BQ9NZR2 4599 aa3.48□□□□□ -1.85
SPTAN1-203ENST00000372739 HECTD4Q9Y4D8 3996 aa3.48□□□□□ -1.85
SPTAN1-203ENST00000372739 LCE2BO14633 110 aa3.44□□□□□ -1.86
SPTAN1-203ENST00000372739 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
SPTAN1-203ENST00000372739 KRTAP19-8Q3LI54 63 aa3.4□□□□□ -1.87
SPTAN1-203ENST00000372739 BIRC6Q9NR09 4857 aa3.37□□□□□ -1.87
SPTAN1-203ENST00000372739 SACSQ9NZJ4 4579 aa3.35□□□□□ -1.87
SPTAN1-203ENST00000372739 PKHD1L1Q86WI1 4243 aa3.35□□□□□ -1.87
SPTAN1-203ENST00000372739 LCE3BQ5TA77 95 aa3.34□□□□□ -1.87
SPTAN1-203ENST00000372739 FAT1Q14517 4588 aa3.33□□□□□ -1.88
SPTAN1-203ENST00000372739 RYR2Q92736 4967 aa3.33□□□□□ -1.88
SPTAN1-203ENST00000372739 KRTAP19-1Q8IUB9 90 aa3.33□□□□□ -1.88
SPTAN1-203ENST00000372739 KRTAP17-1Q9BYP8 105 aa3.32□□□□□ -1.88
SPTAN1-203ENST00000372739 RYR3Q15413 4870 aa3.31□□□□□ -1.88
SPTAN1-203ENST00000372739 MT1XP80297 61 aa3.3□□□□□ -1.88
SPTAN1-203ENST00000372739 RYR1P21817 5038 aa3.29□□□□□ -1.88
SPTAN1-203ENST00000372739 PKHD1P08F94 4074 aa3.28□□□□□ -1.88
SPTAN1-203ENST00000372739 APOBP04114 4563 aaKnown RBP3.27□□□□□ -1.89
SPTAN1-203ENST00000372739 LCE2CQ5TA81 110 aa3.27□□□□□ -1.89
SPTAN1-203ENST00000372739 MT1GP13640 62 aa3.27□□□□□ -1.89
SPTAN1-203ENST00000372739 LRP1Q07954 4544 aaKnown RBP3.27□□□□□ -1.89
SPTAN1-203ENST00000372739 FAT3Q8TDW7 4589 aa3.25□□□□□ -1.89
SPTAN1-203ENST00000372739 HSPG2P98160 4391 aa3.24□□□□□ -1.89
SPTAN1-203ENST00000372739 MT1BP07438 61 aa3.22□□□□□ -1.89
SPTAN1-203ENST00000372739 LCE2DQ5TA82 110 aaPredicted RBP3.22□□□□□ -1.89
SPTAN1-203ENST00000372739 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.9
SPTAN1-203ENST00000372739 HERC1Q15751 4861 aa3.18□□□□□ -1.9
SPTAN1-203ENST00000372739 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
SPTAN1-203ENST00000372739 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
SPTAN1-203ENST00000372739 KIAA1109Q2LD37 5005 aa3.15□□□□□ -1.9
SPTAN1-203ENST00000372739 KRTAP9-3Q9BYQ3 159 aa3.15□□□□□ -1.91
SPTAN1-203ENST00000372739 HERC2O95714 4834 aa3.14□□□□□ -1.91
SPTAN1-203ENST00000372739 PKD1P98161 4303 aa3.14□□□□□ -1.91
SPTAN1-203ENST00000372739 KRTAP4-8A0A0G2JLE6 195 aa3.14□□□□□ -1.91
SPTAN1-203ENST00000372739 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
SPTAN1-203ENST00000372739 MYCBP2O75592 4640 aa3.14□□□□□ -1.91
SPTAN1-203ENST00000372739 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
SPTAN1-203ENST00000372739 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
SPTAN1-203ENST00000372739 MT4P47944 62 aa3.08□□□□□ -1.92
SPTAN1-203ENST00000372739 MT1LQ93083 61 aa3.06□□□□□ -1.92
SPTAN1-203ENST00000372739 KRTAP9-2Q9BYQ4 174 aa3.06□□□□□ -1.92
SPTAN1-203ENST00000372739 HYDINQ4G0P3 5121 aa3.05□□□□□ -1.92
SPTAN1-203ENST00000372739 PCLOQ9Y6V0 5065 aa3.04□□□□□ -1.92
SPTAN1-203ENST00000372739 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
SPTAN1-203ENST00000372739 TNXBP22105 4242 aa3.03□□□□□ -1.92
SPTAN1-203ENST00000372739 MUC17Q685J3 4493 aa3.03□□□□□ -1.92
SPTAN1-203ENST00000372739 LCE2AQ5TA79 106 aaPredicted RBP3□□□□□ -1.93
SPTAN1-203ENST00000372739 KRTAP9-6A0A140TA67 174 aa3□□□□□ -1.93
SPTAN1-203ENST00000372739 MT1EP04732 61 aa3□□□□□ -1.93
SPTAN1-203ENST00000372739 KRTAP19-2Q3LHN2 52 aa2.98□□□□□ -1.93
SPTAN1-203ENST00000372739 KRTAP19-6Q3LI70 58 aa2.97□□□□□ -1.93
SPTAN1-203ENST00000372739 KMT2CQ8NEZ4 4911 aaKnown RBP2.97□□□□□ -1.93
SPTAN1-203ENST00000372739 MT3P25713 68 aa2.95□□□□□ -1.94
SPTAN1-203ENST00000372739 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
SPTAN1-203ENST00000372739 KRTAP4-7Q9BYR0 210 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms