RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 AKAP9Q99996 3911 aa10.38□□□□□ -0.75
RAPGEF1-203ENST00000372195 KRTAP12-3P60328 96 aa10.33□□□□□ -0.76
RAPGEF1-203ENST00000372195 DNAH9Q9NYC9 4486 aa10.08□□□□□ -0.8
RAPGEF1-203ENST00000372195 ZNF469Q96JG9 3925 aaPredicted RBP10.03□□□□□ -0.8
RAPGEF1-203ENST00000372195 DNAH1Q9P2D7 4330 aa10.02□□□□□ -0.8
RAPGEF1-203ENST00000372195 KRTAP10-5P60370 271 aa9.91□□□□□ -0.82
RAPGEF1-203ENST00000372195 KRTAP23-1A1A580 65 aa9.89□□□□□ -0.83
RAPGEF1-203ENST00000372195 DNAH10Q8IVF4 4471 aa9.86□□□□□ -0.83
RAPGEF1-203ENST00000372195 DNAH5Q8TE73 4624 aa9.79□□□□□ -0.84
RAPGEF1-203ENST00000372195 KRTAP4-1Q9BYQ7 146 aa9.77□□□□□ -0.85
RAPGEF1-203ENST00000372195 KRTAP8-1Q8IUC2 63 aa9.76□□□□□ -0.85
RAPGEF1-203ENST00000372195 DNAH2Q9P225 4427 aa9.75□□□□□ -0.85
RAPGEF1-203ENST00000372195 PLECQ15149 4684 aaKnown RBP9.74□□□□□ -0.85
RAPGEF1-203ENST00000372195 DNAH11Q96DT5 4516 aa9.61□□□□□ -0.87
RAPGEF1-203ENST00000372195 DNAH3Q8TD57 4116 aa9.6□□□□□ -0.87
RAPGEF1-203ENST00000372195 DNAH17Q9UFH2 4485 aa9.54□□□□□ -0.88
RAPGEF1-203ENST00000372195 MT1HP80294 61 aa9.53□□□□□ -0.88
RAPGEF1-203ENST00000372195 DNAH8Q96JB1 4490 aa9.51□□□□□ -0.89
RAPGEF1-203ENST00000372195 ANK2Q01484 3957 aa9.49□□□□□ -0.89
RAPGEF1-203ENST00000372195 VPS13DQ5THJ4 4388 aa9.46□□□□□ -0.89
RAPGEF1-203ENST00000372195 MT2AP02795 61 aa9.36□□□□□ -0.91
RAPGEF1-203ENST00000372195 STARD9Q9P2P6 4700 aa9.34□□□□□ -0.91
RAPGEF1-203ENST00000372195 FAT2Q9NYQ8 4349 aa9.33□□□□□ -0.92
RAPGEF1-203ENST00000372195 FRAS1Q86XX4 4008 aa9.33□□□□□ -0.92
RAPGEF1-203ENST00000372195 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
RAPGEF1-203ENST00000372195 KRTAP19-5Q3LI72 72 aa9.28□□□□□ -0.92
RAPGEF1-203ENST00000372195 KMT2AQ03164 3969 aa9.26□□□□□ -0.93
RAPGEF1-203ENST00000372195 MT1FP04733 61 aa9.24□□□□□ -0.93
RAPGEF1-203ENST00000372195 SPRR2GQ9BYE4 73 aa9.22□□□□□ -0.93
RAPGEF1-203ENST00000372195 DYNC2H1Q8NCM8 4307 aaKnown RBP9.22□□□□□ -0.93
RAPGEF1-203ENST00000372195 DYNC1H1Q14204 4646 aaKnown RBP9.21□□□□□ -0.94
RAPGEF1-203ENST00000372195 SACSQ9NZJ4 4579 aa9.19□□□□□ -0.94
RAPGEF1-203ENST00000372195 FAT1Q14517 4588 aa9.18□□□□□ -0.94
RAPGEF1-203ENST00000372195 VPS13BQ7Z7G8 4022 aa9.17□□□□□ -0.94
RAPGEF1-203ENST00000372195 SPRR2FQ96RM1 72 aa9.1□□□□□ -0.95
RAPGEF1-203ENST00000372195 LCE3CQ5T5A8 94 aa9.06□□□□□ -0.96
RAPGEF1-203ENST00000372195 PRKDCP78527 4128 aaKnown RBP9.04□□□□□ -0.96
RAPGEF1-203ENST00000372195 CMYA5Q8N3K9 4069 aa8.98□□□□□ -0.97
RAPGEF1-203ENST00000372195 DNAH7Q8WXX0 4024 aa8.96□□□□□ -0.97
RAPGEF1-203ENST00000372195 KRTAP10-7P60409 375 aaPredicted RBP8.96□□□□□ -0.98
RAPGEF1-203ENST00000372195 LYSTQ99698 3801 aa8.93□□□□□ -0.98
RAPGEF1-203ENST00000372195 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
RAPGEF1-203ENST00000372195 DNHD1Q96M86 4753 aa8.91□□□□□ -0.98
RAPGEF1-203ENST00000372195 RYR1P21817 5038 aa8.83□□□□□ -1
RAPGEF1-203ENST00000372195 DNAH6Q9C0G6 4158 aa8.78□□□□□ -1
RAPGEF1-203ENST00000372195 KRTAP17-1Q9BYP8 105 aa8.7□□□□□ -1.02
RAPGEF1-203ENST00000372195 HECTD4Q9Y4D8 3996 aa8.68□□□□□ -1.02
RAPGEF1-203ENST00000372195 LCE3BQ5TA77 95 aa8.64□□□□□ -1.03
RAPGEF1-203ENST00000372195 KRTAP19-1Q8IUB9 90 aa8.57□□□□□ -1.04
RAPGEF1-203ENST00000372195 FAT3Q8TDW7 4589 aa8.55□□□□□ -1.04
RAPGEF1-203ENST00000372195 MYCBP2O75592 4640 aa8.54□□□□□ -1.04
RAPGEF1-203ENST00000372195 MT1GP13640 62 aa8.53□□□□□ -1.04
RAPGEF1-203ENST00000372195 SPRR2EP22531 72 aa8.52□□□□□ -1.04
RAPGEF1-203ENST00000372195 SPRR2BP35325 72 aa8.52□□□□□ -1.04
RAPGEF1-203ENST00000372195 SPRR2AP35326 72 aa8.52□□□□□ -1.04
RAPGEF1-203ENST00000372195 MT1XP80297 61 aa8.5□□□□□ -1.05
RAPGEF1-203ENST00000372195 RYR3Q15413 4870 aa8.45□□□□□ -1.06
RAPGEF1-203ENST00000372195 KRTAP19-8Q3LI54 63 aa8.43□□□□□ -1.06
RAPGEF1-203ENST00000372195 KRTAP4-8A0A0G2JLE6 195 aa8.41□□□□□ -1.06
RAPGEF1-203ENST00000372195 KRTAP4-8Q9BYQ9 185 aa8.41□□□□□ -1.06
RAPGEF1-203ENST00000372195 LRP1Q07954 4544 aaKnown RBP8.41□□□□□ -1.06
RAPGEF1-203ENST00000372195 KRTAP12-4P60329 112 aa8.35□□□□□ -1.07
RAPGEF1-203ENST00000372195 MT1BP07438 61 aa8.32□□□□□ -1.08
RAPGEF1-203ENST00000372195 LPAP08519 4548 aa8.27□□□□□ -1.09
RAPGEF1-203ENST00000372195 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
RAPGEF1-203ENST00000372195 SPRR2DP22532 72 aa8.21□□□□□ -1.1
RAPGEF1-203ENST00000372195 HSPG2P98160 4391 aa8.2□□□□□ -1.1
RAPGEF1-203ENST00000372195 KRTAP19-4Q3LI73 84 aa8.15□□□□□ -1.1
RAPGEF1-203ENST00000372195 LCE2BO14633 110 aa8.12□□□□□ -1.11
RAPGEF1-203ENST00000372195 PKD1P98161 4303 aa8.12□□□□□ -1.11
RAPGEF1-203ENST00000372195 KRTAP4-7Q9BYR0 210 aa8.06□□□□□ -1.12
RAPGEF1-203ENST00000372195 SPRR5A0A1B0GTR4 108 aa8.04□□□□□ -1.12
RAPGEF1-203ENST00000372195 KRTAP9-3Q9BYQ3 159 aa8.03□□□□□ -1.12
RAPGEF1-203ENST00000372195 HYDINQ4G0P3 5121 aa8.02□□□□□ -1.13
RAPGEF1-203ENST00000372195 LCE2CQ5TA81 110 aa8.01□□□□□ -1.13
RAPGEF1-203ENST00000372195 PKHD1P08F94 4074 aa7.97□□□□□ -1.13
RAPGEF1-203ENST00000372195 LCE3DQ9BYE3 92 aa7.95□□□□□ -1.14
RAPGEF1-203ENST00000372195 RYR2Q92736 4967 aa7.93□□□□□ -1.14
RAPGEF1-203ENST00000372195 PKHD1L1Q86WI1 4243 aa7.91□□□□□ -1.14
RAPGEF1-203ENST00000372195 TNXBP22105 4242 aa7.9□□□□□ -1.14
RAPGEF1-203ENST00000372195 LRP2P98164 4655 aa7.89□□□□□ -1.15
RAPGEF1-203ENST00000372195 KIAA1109Q2LD37 5005 aa7.84□□□□□ -1.15
RAPGEF1-203ENST00000372195 LCE3EQ5T5B0 92 aa7.77□□□□□ -1.17
RAPGEF1-203ENST00000372195 HERC1Q15751 4861 aa7.73□□□□□ -1.17
RAPGEF1-203ENST00000372195 MT1LQ93083 61 aa7.7□□□□□ -1.18
RAPGEF1-203ENST00000372195 KRTAP19-3Q7Z4W3 81 aa7.7□□□□□ -1.18
RAPGEF1-203ENST00000372195 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
RAPGEF1-203ENST00000372195 MT1EP04732 61 aa7.61□□□□□ -1.19
RAPGEF1-203ENST00000372195 HERC2O95714 4834 aa7.55□□□□□ -1.2
RAPGEF1-203ENST00000372195 KMT2CQ8NEZ4 4911 aaKnown RBP7.54□□□□□ -1.2
RAPGEF1-203ENST00000372195 KRTAP19-2Q3LHN2 52 aa7.53□□□□□ -1.2
RAPGEF1-203ENST00000372195 KRTAP4-3Q9BYR4 195 aa7.53□□□□□ -1.2
RAPGEF1-203ENST00000372195 LCE2DQ5TA82 110 aaPredicted RBP7.49□□□□□ -1.21
RAPGEF1-203ENST00000372195 PRM1P04553 51 aa7.48□□□□□ -1.21
RAPGEF1-203ENST00000372195 FLGP20930 4061 aaPredicted RBP7.46□□□□□ -1.21
RAPGEF1-203ENST00000372195 MT4P47944 62 aa7.45□□□□□ -1.22
RAPGEF1-203ENST00000372195 MUC17Q685J3 4493 aa7.41□□□□□ -1.22
RAPGEF1-203ENST00000372195 MT1MQ8N339 61 aa7.4□□□□□ -1.23
RAPGEF1-203ENST00000372195 PCLOQ9Y6V0 5065 aa7.33□□□□□ -1.24
RAPGEF1-203ENST00000372195 BIRC6Q9NR09 4857 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms