RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
ABCA4-201ENST00000370225 ZNF469Q96JG9 3925 aaPredicted RBP3.7□□□□□ -1.82
ABCA4-201ENST00000370225 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
ABCA4-201ENST00000370225 LORP23490 312 aaPredicted RBP3.7□□□□□ -1.82
ABCA4-201ENST00000370225 KRTAP8-1Q8IUC2 63 aa3.65□□□□□ -1.82
ABCA4-201ENST00000370225 DNAH9Q9NYC9 4486 aa3.63□□□□□ -1.83
ABCA4-201ENST00000370225 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
ABCA4-201ENST00000370225 DNAH1Q9P2D7 4330 aa3.58□□□□□ -1.84
ABCA4-201ENST00000370225 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
ABCA4-201ENST00000370225 MT1HP80294 61 aa3.51□□□□□ -1.85
ABCA4-201ENST00000370225 DNAH2Q9P225 4427 aa3.49□□□□□ -1.85
ABCA4-201ENST00000370225 DNAH5Q8TE73 4624 aa3.48□□□□□ -1.85
ABCA4-201ENST00000370225 DNAH10Q8IVF4 4471 aa3.47□□□□□ -1.85
ABCA4-201ENST00000370225 DNAH3Q8TD57 4116 aa3.46□□□□□ -1.86
ABCA4-201ENST00000370225 PLECQ15149 4684 aaKnown RBP3.44□□□□□ -1.86
ABCA4-201ENST00000370225 ANK2Q01484 3957 aa3.44□□□□□ -1.86
ABCA4-201ENST00000370225 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
ABCA4-201ENST00000370225 KMT2AQ03164 3969 aa3.42□□□□□ -1.86
ABCA4-201ENST00000370225 FAT2Q9NYQ8 4349 aa3.41□□□□□ -1.86
ABCA4-201ENST00000370225 MT2AP02795 61 aa3.4□□□□□ -1.86
ABCA4-201ENST00000370225 VPS13BQ7Z7G8 4022 aa3.39□□□□□ -1.87
ABCA4-201ENST00000370225 DNAH11Q96DT5 4516 aa3.39□□□□□ -1.87
ABCA4-201ENST00000370225 FRAS1Q86XX4 4008 aa3.38□□□□□ -1.87
ABCA4-201ENST00000370225 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
ABCA4-201ENST00000370225 STARD9Q9P2P6 4700 aa3.35□□□□□ -1.87
ABCA4-201ENST00000370225 MT1FP04733 61 aa3.35□□□□□ -1.87
ABCA4-201ENST00000370225 VPS13DQ5THJ4 4388 aa3.35□□□□□ -1.87
ABCA4-201ENST00000370225 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.88
ABCA4-201ENST00000370225 LRP1BQ9NZR2 4599 aa3.33□□□□□ -1.88
ABCA4-201ENST00000370225 LYSTQ99698 3801 aa3.33□□□□□ -1.88
ABCA4-201ENST00000370225 CMYA5Q8N3K9 4069 aa3.33□□□□□ -1.88
ABCA4-201ENST00000370225 DNAH17Q9UFH2 4485 aa3.32□□□□□ -1.88
ABCA4-201ENST00000370225 DNAH7Q8WXX0 4024 aa3.32□□□□□ -1.88
ABCA4-201ENST00000370225 PRKDCP78527 4128 aaKnown RBP3.32□□□□□ -1.88
ABCA4-201ENST00000370225 DYNC2H1Q8NCM8 4307 aaKnown RBP3.3□□□□□ -1.88
ABCA4-201ENST00000370225 DNAH8Q96JB1 4490 aa3.3□□□□□ -1.88
ABCA4-201ENST00000370225 SPRR2GQ9BYE4 73 aa3.29□□□□□ -1.88
ABCA4-201ENST00000370225 SPRR2EP22531 72 aa3.26□□□□□ -1.89
ABCA4-201ENST00000370225 SPRR2BP35325 72 aa3.26□□□□□ -1.89
ABCA4-201ENST00000370225 SPRR2AP35326 72 aa3.26□□□□□ -1.89
ABCA4-201ENST00000370225 FAT1Q14517 4588 aa3.25□□□□□ -1.89
ABCA4-201ENST00000370225 DNHD1Q96M86 4753 aa3.24□□□□□ -1.89
ABCA4-201ENST00000370225 DYNC1H1Q14204 4646 aaKnown RBP3.23□□□□□ -1.89
ABCA4-201ENST00000370225 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.89
ABCA4-201ENST00000370225 SACSQ9NZJ4 4579 aa3.21□□□□□ -1.9
ABCA4-201ENST00000370225 DNAH6Q9C0G6 4158 aa3.21□□□□□ -1.9
ABCA4-201ENST00000370225 RYR1P21817 5038 aa3.16□□□□□ -1.9
ABCA4-201ENST00000370225 HECTD4Q9Y4D8 3996 aa3.15□□□□□ -1.9
ABCA4-201ENST00000370225 SPRR2DP22532 72 aa3.15□□□□□ -1.91
ABCA4-201ENST00000370225 LCE3BQ5TA77 95 aa3.15□□□□□ -1.91
ABCA4-201ENST00000370225 KRTAP17-1Q9BYP8 105 aa3.14□□□□□ -1.91
ABCA4-201ENST00000370225 APOBP04114 4563 aaKnown RBP3.13□□□□□ -1.91
ABCA4-201ENST00000370225 MT1GP13640 62 aa3.09□□□□□ -1.91
ABCA4-201ENST00000370225 LCE2BO14633 110 aa3.08□□□□□ -1.92
ABCA4-201ENST00000370225 FAT3Q8TDW7 4589 aa3.06□□□□□ -1.92
ABCA4-201ENST00000370225 KRTAP4-8A0A0G2JLE6 195 aa3.04□□□□□ -1.92
ABCA4-201ENST00000370225 KRTAP4-8Q9BYQ9 185 aa3.04□□□□□ -1.92
ABCA4-201ENST00000370225 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
ABCA4-201ENST00000370225 RYR3Q15413 4870 aa3.03□□□□□ -1.92
ABCA4-201ENST00000370225 MT1XP80297 61 aa3.02□□□□□ -1.93
ABCA4-201ENST00000370225 MYCBP2O75592 4640 aa3.01□□□□□ -1.93
ABCA4-201ENST00000370225 HSPG2P98160 4391 aa3□□□□□ -1.93
ABCA4-201ENST00000370225 LPAP08519 4548 aa3□□□□□ -1.93
ABCA4-201ENST00000370225 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
ABCA4-201ENST00000370225 LRP1Q07954 4544 aaKnown RBP2.99□□□□□ -1.93
ABCA4-201ENST00000370225 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
ABCA4-201ENST00000370225 PKHD1L1Q86WI1 4243 aa2.97□□□□□ -1.93
ABCA4-201ENST00000370225 KRTAP9-8Q9BYQ0 159 aa2.97□□□□□ -1.93
ABCA4-201ENST00000370225 MT1BP07438 61 aa2.96□□□□□ -1.94
ABCA4-201ENST00000370225 PKHD1P08F94 4074 aa2.96□□□□□ -1.94
ABCA4-201ENST00000370225 PKD1P98161 4303 aa2.92□□□□□ -1.94
ABCA4-201ENST00000370225 KRTAP9-3Q9BYQ3 159 aa2.9□□□□□ -1.94
ABCA4-201ENST00000370225 MT3P25713 68 aa2.9□□□□□ -1.95
ABCA4-201ENST00000370225 LCE2CQ5TA81 110 aa2.89□□□□□ -1.95
ABCA4-201ENST00000370225 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
ABCA4-201ENST00000370225 LCE2DQ5TA82 110 aaPredicted RBP2.87□□□□□ -1.95
ABCA4-201ENST00000370225 MT4P47944 62 aa2.86□□□□□ -1.95
ABCA4-201ENST00000370225 KRTAP4-7Q9BYR0 210 aa2.86□□□□□ -1.95
ABCA4-201ENST00000370225 TNXBP22105 4242 aa2.85□□□□□ -1.95
ABCA4-201ENST00000370225 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
ABCA4-201ENST00000370225 HYDINQ4G0P3 5121 aa2.84□□□□□ -1.96
ABCA4-201ENST00000370225 KRTAP19-3Q7Z4W3 81 aa2.8□□□□□ -1.96
ABCA4-201ENST00000370225 LRP2P98164 4655 aa2.79□□□□□ -1.96
ABCA4-201ENST00000370225 KRTAP9-2Q9BYQ4 174 aa2.79□□□□□ -1.96
ABCA4-201ENST00000370225 RYR2Q92736 4967 aa2.77□□□□□ -1.97
ABCA4-201ENST00000370225 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
ABCA4-201ENST00000370225 KIAA1109Q2LD37 5005 aa2.75□□□□□ -1.97
ABCA4-201ENST00000370225 MT1LQ93083 61 aa2.74□□□□□ -1.97
ABCA4-201ENST00000370225 LOC100996750A0A140TA64 210 aa2.74□□□□□ -1.97
ABCA4-201ENST00000370225 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
ABCA4-201ENST00000370225 MT1EP04732 61 aa2.72□□□□□ -1.97
ABCA4-201ENST00000370225 HERC2O95714 4834 aa2.72□□□□□ -1.97
ABCA4-201ENST00000370225 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
ABCA4-201ENST00000370225 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
ABCA4-201ENST00000370225 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
ABCA4-201ENST00000370225 HERC1Q15751 4861 aa2.68□□□□□ -1.98
ABCA4-201ENST00000370225 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
ABCA4-201ENST00000370225 LCE1DQ5T752 114 aa2.68□□□□□ -1.98
ABCA4-201ENST00000370225 MT1MQ8N339 61 aa2.66□□□□□ -1.98
ABCA4-201ENST00000370225 MUC17Q685J3 4493 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms