RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 KRTAP10-4P60372 401 aaPredicted RBP3.52□□□□□ -1.85
VANGL1-204ENST00000369510 TRRAPQ9Y4A5 3859 aa3.49□□□□□ -1.85
VANGL1-204ENST00000369510 KRTAP4-5Q9BYR2 181 aa3.48□□□□□ -1.85
VANGL1-204ENST00000369510 DNAH1Q9P2D7 4330 aa3.46□□□□□ -1.86
VANGL1-204ENST00000369510 DNAH10Q8IVF4 4471 aa3.45□□□□□ -1.86
VANGL1-204ENST00000369510 DNAH2Q9P225 4427 aa3.44□□□□□ -1.86
VANGL1-204ENST00000369510 VPS13CQ709C8 3753 aa3.44□□□□□ -1.86
VANGL1-204ENST00000369510 AKAP9Q99996 3911 aa3.43□□□□□ -1.86
VANGL1-204ENST00000369510 DNAH9Q9NYC9 4486 aa3.42□□□□□ -1.86
VANGL1-204ENST00000369510 DNAH8Q96JB1 4490 aa3.41□□□□□ -1.86
VANGL1-204ENST00000369510 CSMD2Q7Z408 3487 aa3.4□□□□□ -1.86
VANGL1-204ENST00000369510 DNAH17Q9UFH2 4485 aa3.39□□□□□ -1.87
VANGL1-204ENST00000369510 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
VANGL1-204ENST00000369510 DNAH11Q96DT5 4516 aa3.33□□□□□ -1.88
VANGL1-204ENST00000369510 SACSQ9NZJ4 4579 aa3.33□□□□□ -1.88
VANGL1-204ENST00000369510 PLECQ15149 4684 aaKnown RBP3.32□□□□□ -1.88
VANGL1-204ENST00000369510 CUBNO60494 3623 aa3.32□□□□□ -1.88
VANGL1-204ENST00000369510 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
VANGL1-204ENST00000369510 KRTAP4-1Q9BYQ7 146 aa3.28□□□□□ -1.88
VANGL1-204ENST00000369510 DNAH5Q8TE73 4624 aa3.27□□□□□ -1.89
VANGL1-204ENST00000369510 DYNC1H1Q14204 4646 aaKnown RBP3.25□□□□□ -1.89
VANGL1-204ENST00000369510 VPS13DQ5THJ4 4388 aa3.25□□□□□ -1.89
VANGL1-204ENST00000369510 MT1HP80294 61 aa3.23□□□□□ -1.89
VANGL1-204ENST00000369510 SPRR2FQ96RM1 72 aa3.21□□□□□ -1.9
VANGL1-204ENST00000369510 ZNF469Q96JG9 3925 aaPredicted RBP3.2□□□□□ -1.9
VANGL1-204ENST00000369510 LRP1BQ9NZR2 4599 aa3.2□□□□□ -1.9
VANGL1-204ENST00000369510 DNHD1Q96M86 4753 aa3.18□□□□□ -1.9
VANGL1-204ENST00000369510 SPRR2GQ9BYE4 73 aa3.17□□□□□ -1.9
VANGL1-204ENST00000369510 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
VANGL1-204ENST00000369510 FAT1Q14517 4588 aa3.16□□□□□ -1.9
VANGL1-204ENST00000369510 MT2AP02795 61 aa3.15□□□□□ -1.91
VANGL1-204ENST00000369510 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
VANGL1-204ENST00000369510 CSMD3Q7Z407 3707 aa3.14□□□□□ -1.91
VANGL1-204ENST00000369510 DYNC2H1Q8NCM8 4307 aaKnown RBP3.14□□□□□ -1.91
VANGL1-204ENST00000369510 KRTAP19-5Q3LI72 72 aa3.13□□□□□ -1.91
VANGL1-204ENST00000369510 HYDINQ4G0P3 5121 aa3.12□□□□□ -1.91
VANGL1-204ENST00000369510 DNAH3Q8TD57 4116 aa3.11□□□□□ -1.91
VANGL1-204ENST00000369510 APOBP04114 4563 aaKnown RBP3.11□□□□□ -1.91
VANGL1-204ENST00000369510 LCE3BQ5TA77 95 aa3.09□□□□□ -1.91
VANGL1-204ENST00000369510 FAT3Q8TDW7 4589 aa3.09□□□□□ -1.92
VANGL1-204ENST00000369510 STARD9Q9P2P6 4700 aa3.07□□□□□ -1.92
VANGL1-204ENST00000369510 LYSTQ99698 3801 aa3.07□□□□□ -1.92
VANGL1-204ENST00000369510 RYR2Q92736 4967 aa3.06□□□□□ -1.92
VANGL1-204ENST00000369510 MT1FP04733 61 aa3.05□□□□□ -1.92
VANGL1-204ENST00000369510 DNAH7Q8WXX0 4024 aa3.05□□□□□ -1.92
VANGL1-204ENST00000369510 FAT2Q9NYQ8 4349 aa3.04□□□□□ -1.92
VANGL1-204ENST00000369510 ANK2Q01484 3957 aa3.04□□□□□ -1.92
VANGL1-204ENST00000369510 LCE2BO14633 110 aa3.03□□□□□ -1.92
VANGL1-204ENST00000369510 SPRR2EP22531 72 aa3.03□□□□□ -1.93
VANGL1-204ENST00000369510 SPRR2BP35325 72 aa3.03□□□□□ -1.93
VANGL1-204ENST00000369510 SPRR2AP35326 72 aa3.03□□□□□ -1.93
VANGL1-204ENST00000369510 KRTAP17-1Q9BYP8 105 aa3.01□□□□□ -1.93
VANGL1-204ENST00000369510 FRAS1Q86XX4 4008 aa2.99□□□□□ -1.93
VANGL1-204ENST00000369510 SPRR2DP22532 72 aa2.99□□□□□ -1.93
VANGL1-204ENST00000369510 MYCBP2O75592 4640 aa2.99□□□□□ -1.93
VANGL1-204ENST00000369510 CMYA5Q8N3K9 4069 aa2.98□□□□□ -1.93
VANGL1-204ENST00000369510 PRKDCP78527 4128 aaKnown RBP2.98□□□□□ -1.93
VANGL1-204ENST00000369510 DNAH6Q9C0G6 4158 aa2.97□□□□□ -1.93
VANGL1-204ENST00000369510 HERC1Q15751 4861 aa2.96□□□□□ -1.94
VANGL1-204ENST00000369510 VPS13BQ7Z7G8 4022 aa2.95□□□□□ -1.94
VANGL1-204ENST00000369510 MT1GP13640 62 aa2.94□□□□□ -1.94
VANGL1-204ENST00000369510 RYR1P21817 5038 aa2.93□□□□□ -1.94
VANGL1-204ENST00000369510 RYR3Q15413 4870 aa2.93□□□□□ -1.94
VANGL1-204ENST00000369510 KRTAP19-8Q3LI54 63 aa2.9□□□□□ -1.94
VANGL1-204ENST00000369510 KMT2AQ03164 3969 aa2.89□□□□□ -1.95
VANGL1-204ENST00000369510 LCE2CQ5TA81 110 aa2.88□□□□□ -1.95
VANGL1-204ENST00000369510 KIAA1109Q2LD37 5005 aa2.88□□□□□ -1.95
VANGL1-204ENST00000369510 PKD1P98161 4303 aa2.88□□□□□ -1.95
VANGL1-204ENST00000369510 SPRR5A0A1B0GTR4 108 aa2.87□□□□□ -1.95
VANGL1-204ENST00000369510 HSPG2P98160 4391 aa2.85□□□□□ -1.95
VANGL1-204ENST00000369510 BIRC6Q9NR09 4857 aa2.85□□□□□ -1.95
VANGL1-204ENST00000369510 KRTAP19-1Q8IUB9 90 aa2.85□□□□□ -1.95
VANGL1-204ENST00000369510 LPAP08519 4548 aa2.83□□□□□ -1.96
VANGL1-204ENST00000369510 ABCA13Q86UQ4 5058 aa2.83□□□□□ -1.96
VANGL1-204ENST00000369510 MT1XP80297 61 aa2.83□□□□□ -1.96
VANGL1-204ENST00000369510 HECTD4Q9Y4D8 3996 aa2.82□□□□□ -1.96
VANGL1-204ENST00000369510 KRTAP4-8A0A0G2JLE6 195 aa2.82□□□□□ -1.96
VANGL1-204ENST00000369510 KRTAP4-8Q9BYQ9 185 aa2.82□□□□□ -1.96
VANGL1-204ENST00000369510 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
VANGL1-204ENST00000369510 PRM1P04553 51 aa2.8□□□□□ -1.96
VANGL1-204ENST00000369510 EPPK1P58107 5090 aaKnown RBP2.79□□□□□ -1.96
VANGL1-204ENST00000369510 MT1BP07438 61 aa2.79□□□□□ -1.96
VANGL1-204ENST00000369510 MT1LQ93083 61 aa2.79□□□□□ -1.96
VANGL1-204ENST00000369510 KMT2CQ8NEZ4 4911 aaKnown RBP2.78□□□□□ -1.97
VANGL1-204ENST00000369510 KRTAP4-7Q9BYR0 210 aa2.77□□□□□ -1.97
VANGL1-204ENST00000369510 LCE2DQ5TA82 110 aaPredicted RBP2.76□□□□□ -1.97
VANGL1-204ENST00000369510 PKHD1L1Q86WI1 4243 aa2.75□□□□□ -1.97
VANGL1-204ENST00000369510 KRTAP9-8Q9BYQ0 159 aa2.73□□□□□ -1.97
VANGL1-204ENST00000369510 KRTAP9-3Q9BYQ3 159 aa2.69□□□□□ -1.98
VANGL1-204ENST00000369510 PCLOQ9Y6V0 5065 aa2.68□□□□□ -1.98
VANGL1-204ENST00000369510 MUC17Q685J3 4493 aa2.68□□□□□ -1.98
VANGL1-204ENST00000369510 KRTAP19-3Q7Z4W3 81 aa2.67□□□□□ -1.98
VANGL1-204ENST00000369510 HERC2O95714 4834 aa2.66□□□□□ -1.98
VANGL1-204ENST00000369510 HMCN2Q8NDA2 5059 aa2.65□□□□□ -1.98
VANGL1-204ENST00000369510 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
VANGL1-204ENST00000369510 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
VANGL1-204ENST00000369510 MT1EP04732 61 aa2.63□□□□□ -1.99
VANGL1-204ENST00000369510 LRP2P98164 4655 aa2.61□□□□□ -1.99
VANGL1-204ENST00000369510 PKHD1P08F94 4074 aa2.61□□□□□ -1.99
VANGL1-204ENST00000369510 TNXBP22105 4242 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms