RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 SRRM2Q9UQ35 2752 aaKnown RBP7.65□□□□□ -1.18
SNX27-203ENST00000368843 LORP23490 312 aaPredicted RBP7.64□□□□□ -1.19
SNX27-203ENST00000368843 KRTAP10-5P60370 271 aa7.63□□□□□ -1.19
SNX27-203ENST00000368843 KRTAP8-1Q8IUC2 63 aa7.62□□□□□ -1.19
SNX27-203ENST00000368843 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
SNX27-203ENST00000368843 DNAH9Q9NYC9 4486 aa7.36□□□□□ -1.23
SNX27-203ENST00000368843 DNAH1Q9P2D7 4330 aa7.32□□□□□ -1.24
SNX27-203ENST00000368843 MT1HP80294 61 aa7.27□□□□□ -1.25
SNX27-203ENST00000368843 KRTAP4-1Q9BYQ7 146 aa7.22□□□□□ -1.25
SNX27-203ENST00000368843 ZNF469Q96JG9 3925 aaPredicted RBP7.18□□□□□ -1.26
SNX27-203ENST00000368843 DNAH10Q8IVF4 4471 aa7.11□□□□□ -1.27
SNX27-203ENST00000368843 DNAH2Q9P225 4427 aa7.1□□□□□ -1.27
SNX27-203ENST00000368843 SPRR2FQ96RM1 72 aa7.1□□□□□ -1.27
SNX27-203ENST00000368843 MT2AP02795 61 aa7.08□□□□□ -1.28
SNX27-203ENST00000368843 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
SNX27-203ENST00000368843 DNAH5Q8TE73 4624 aa7.04□□□□□ -1.28
SNX27-203ENST00000368843 KRTAP10-7P60409 375 aaPredicted RBP7.04□□□□□ -1.28
SNX27-203ENST00000368843 FRAS1Q86XX4 4008 aa6.98□□□□□ -1.29
SNX27-203ENST00000368843 ANK2Q01484 3957 aa6.97□□□□□ -1.29
SNX27-203ENST00000368843 FAT2Q9NYQ8 4349 aa6.95□□□□□ -1.3
SNX27-203ENST00000368843 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
SNX27-203ENST00000368843 SPRR2GQ9BYE4 73 aa6.95□□□□□ -1.3
SNX27-203ENST00000368843 MT1FP04733 61 aa6.94□□□□□ -1.3
SNX27-203ENST00000368843 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
SNX27-203ENST00000368843 DNAH8Q96JB1 4490 aa6.91□□□□□ -1.3
SNX27-203ENST00000368843 DNAH11Q96DT5 4516 aa6.88□□□□□ -1.31
SNX27-203ENST00000368843 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
SNX27-203ENST00000368843 DNAH17Q9UFH2 4485 aa6.85□□□□□ -1.31
SNX27-203ENST00000368843 DYNC2H1Q8NCM8 4307 aaKnown RBP6.8□□□□□ -1.32
SNX27-203ENST00000368843 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
SNX27-203ENST00000368843 DNAH7Q8WXX0 4024 aa6.77□□□□□ -1.33
SNX27-203ENST00000368843 KMT2AQ03164 3969 aa6.76□□□□□ -1.33
SNX27-203ENST00000368843 SPRR2EP22531 72 aa6.76□□□□□ -1.33
SNX27-203ENST00000368843 SPRR2BP35325 72 aa6.76□□□□□ -1.33
SNX27-203ENST00000368843 SPRR2AP35326 72 aa6.76□□□□□ -1.33
SNX27-203ENST00000368843 LRP1BQ9NZR2 4599 aa6.74□□□□□ -1.33
SNX27-203ENST00000368843 VPS13BQ7Z7G8 4022 aa6.71□□□□□ -1.33
SNX27-203ENST00000368843 STARD9Q9P2P6 4700 aa6.69□□□□□ -1.34
SNX27-203ENST00000368843 PRKDCP78527 4128 aaKnown RBP6.68□□□□□ -1.34
SNX27-203ENST00000368843 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
SNX27-203ENST00000368843 CMYA5Q8N3K9 4069 aa6.61□□□□□ -1.35
SNX27-203ENST00000368843 DNAH6Q9C0G6 4158 aa6.6□□□□□ -1.35
SNX27-203ENST00000368843 DYNC1H1Q14204 4646 aaKnown RBP6.59□□□□□ -1.35
SNX27-203ENST00000368843 SACSQ9NZJ4 4579 aa6.56□□□□□ -1.36
SNX27-203ENST00000368843 FAT1Q14517 4588 aa6.54□□□□□ -1.36
SNX27-203ENST00000368843 SPRR2DP22532 72 aa6.53□□□□□ -1.36
SNX27-203ENST00000368843 LYSTQ99698 3801 aa6.53□□□□□ -1.36
SNX27-203ENST00000368843 MT1GP13640 62 aa6.44□□□□□ -1.38
SNX27-203ENST00000368843 LCE2BO14633 110 aa6.43□□□□□ -1.38
SNX27-203ENST00000368843 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
SNX27-203ENST00000368843 KRTAP19-8Q3LI54 63 aa6.36□□□□□ -1.39
SNX27-203ENST00000368843 DNHD1Q96M86 4753 aa6.34□□□□□ -1.4
SNX27-203ENST00000368843 APOBP04114 4563 aaKnown RBP6.33□□□□□ -1.4
SNX27-203ENST00000368843 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
SNX27-203ENST00000368843 MT1XP80297 61 aa6.31□□□□□ -1.4
SNX27-203ENST00000368843 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
SNX27-203ENST00000368843 KRTAP17-1Q9BYP8 105 aa6.29□□□□□ -1.4
SNX27-203ENST00000368843 RYR1P21817 5038 aa6.29□□□□□ -1.4
SNX27-203ENST00000368843 KRTAP12-4P60329 112 aa6.29□□□□□ -1.4
SNX27-203ENST00000368843 HECTD4Q9Y4D8 3996 aa6.28□□□□□ -1.4
SNX27-203ENST00000368843 KRTAP4-8A0A0G2JLE6 195 aa6.23□□□□□ -1.41
SNX27-203ENST00000368843 KRTAP4-8Q9BYQ9 185 aa6.23□□□□□ -1.41
SNX27-203ENST00000368843 MT1BP07438 61 aa6.18□□□□□ -1.42
SNX27-203ENST00000368843 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
SNX27-203ENST00000368843 LRP1Q07954 4544 aaKnown RBP6.12□□□□□ -1.43
SNX27-203ENST00000368843 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
SNX27-203ENST00000368843 LPAP08519 4548 aa6.1□□□□□ -1.43
SNX27-203ENST00000368843 RYR3Q15413 4870 aa6.08□□□□□ -1.44
SNX27-203ENST00000368843 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
SNX27-203ENST00000368843 HSPG2P98160 4391 aa6.03□□□□□ -1.44
SNX27-203ENST00000368843 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
SNX27-203ENST00000368843 LCE3DQ9BYE3 92 aa6□□□□□ -1.45
SNX27-203ENST00000368843 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
SNX27-203ENST00000368843 PKD1P98161 4303 aa5.99□□□□□ -1.45
SNX27-203ENST00000368843 LCE2DQ5TA82 110 aaPredicted RBP5.96□□□□□ -1.46
SNX27-203ENST00000368843 MYCBP2O75592 4640 aa5.95□□□□□ -1.46
SNX27-203ENST00000368843 KRTAP19-3Q7Z4W3 81 aa5.89□□□□□ -1.47
SNX27-203ENST00000368843 LCE3EQ5T5B0 92 aa5.85□□□□□ -1.47
SNX27-203ENST00000368843 MT4P47944 62 aa5.84□□□□□ -1.47
SNX27-203ENST00000368843 PKHD1P08F94 4074 aa5.82□□□□□ -1.48
SNX27-203ENST00000368843 MT1LQ93083 61 aa5.75□□□□□ -1.49
SNX27-203ENST00000368843 TNXBP22105 4242 aa5.75□□□□□ -1.49
SNX27-203ENST00000368843 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
SNX27-203ENST00000368843 MT1EP04732 61 aa5.71□□□□□ -1.5
SNX27-203ENST00000368843 HERC1Q15751 4861 aa5.69□□□□□ -1.5
SNX27-203ENST00000368843 KRTAP9-2Q9BYQ4 174 aa5.68□□□□□ -1.5
SNX27-203ENST00000368843 RYR2Q92736 4967 aa5.67□□□□□ -1.5
SNX27-203ENST00000368843 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
SNX27-203ENST00000368843 PRM1P04553 51 aa5.62□□□□□ -1.51
SNX27-203ENST00000368843 LCE1BQ5T7P3 118 aa5.62□□□□□ -1.51
SNX27-203ENST00000368843 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
SNX27-203ENST00000368843 MT1MQ8N339 61 aa5.58□□□□□ -1.52
SNX27-203ENST00000368843 MT3P25713 68 aa5.57□□□□□ -1.52
SNX27-203ENST00000368843 FLGP20930 4061 aaPredicted RBP5.56□□□□□ -1.52
SNX27-203ENST00000368843 HYDINQ4G0P3 5121 aa5.56□□□□□ -1.52
SNX27-203ENST00000368843 LCE1DQ5T752 114 aa5.54□□□□□ -1.52
SNX27-203ENST00000368843 MUC17Q685J3 4493 aa5.53□□□□□ -1.52
SNX27-203ENST00000368843 LRP2P98164 4655 aa5.51□□□□□ -1.53
SNX27-203ENST00000368843 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
SNX27-203ENST00000368843 KRTAP19-2Q3LHN2 52 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms