RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 CENPEQ02224 2701 aa1.71□□□□□ -2.14
PTPRC-202ENST00000367364 DNAH3Q8TD57 4116 aa1.71□□□□□ -2.14
PTPRC-202ENST00000367364 MEGF8Q7Z7M0 2845 aa1.71□□□□□ -2.14
PTPRC-202ENST00000367364 SRRM2Q9UQ35 2752 aaKnown RBP1.7□□□□□ -2.14
PTPRC-202ENST00000367364 DNAH2Q9P225 4427 aa1.7□□□□□ -2.14
PTPRC-202ENST00000367364 SACSQ9NZJ4 4579 aa1.7□□□□□ -2.14
PTPRC-202ENST00000367364 CMYA5Q8N3K9 4069 aa1.7□□□□□ -2.14
PTPRC-202ENST00000367364 CIRBP-AS1Q8TBR5 109 aa1.7□□□□□ -2.14
PTPRC-202ENST00000367364 HELZ2Q9BYK8 2649 aaKnown RBP1.7□□□□□ -2.14
PTPRC-202ENST00000367364 DNAH7Q8WXX0 4024 aa1.69□□□□□ -2.14
PTPRC-202ENST00000367364 ABCA12Q86UK0 2595 aa1.69□□□□□ -2.14
PTPRC-202ENST00000367364 ACANP16112 2415 aa1.69□□□□□ -2.14
PTPRC-202ENST00000367364 TENM3Q9P273 2699 aa1.69□□□□□ -2.14
PTPRC-202ENST00000367364 CUBNO60494 3623 aa1.69□□□□□ -2.14
PTPRC-202ENST00000367364 KRTAP13-4Q3LI77 160 aa1.69□□□□□ -2.14
PTPRC-202ENST00000367364 SPACA4Q8TDM5 124 aa1.69□□□□□ -2.14
PTPRC-202ENST00000367364 C10orf95Q9H7T3 257 aa1.69□□□□□ -2.14
PTPRC-202ENST00000367364 ITPR3Q14573 2671 aa1.69□□□□□ -2.14
PTPRC-202ENST00000367364 DNAH11Q96DT5 4516 aa1.68□□□□□ -2.14
PTPRC-202ENST00000367364 HUWE1Q7Z6Z7 4374 aaKnown RBP1.68□□□□□ -2.14
PTPRC-202ENST00000367364 TENM4Q6N022 2769 aa1.68□□□□□ -2.14
PTPRC-202ENST00000367364 Q6ZRN7 208 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-202ENST00000367364 PKD1L1Q8TDX9 2849 aa1.67□□□□□ -2.14
PTPRC-202ENST00000367364 ZNF469Q96JG9 3925 aaPredicted RBP1.67□□□□□ -2.14
PTPRC-202ENST00000367364 FASNP49327 2511 aaKnown RBP1.67□□□□□ -2.14
PTPRC-202ENST00000367364 HECTD1Q9ULT8 2610 aa1.67□□□□□ -2.14
PTPRC-202ENST00000367364 LYSTQ99698 3801 aa1.66□□□□□ -2.14
PTPRC-202ENST00000367364 NIPBLQ6KC79 2804 aaeCLIP1.66□□□□□ -2.14
PTPRC-202ENST00000367364 SPINK1P00995 79 aa1.66□□□□□ -2.14
PTPRC-202ENST00000367364 POLQO75417 2590 aa1.66□□□□□ -2.14
PTPRC-202ENST00000367364 VWFP04275 2813 aa1.66□□□□□ -2.14
PTPRC-202ENST00000367364 COL6A5A8TX70 2615 aa1.66□□□□□ -2.14
PTPRC-202ENST00000367364 SPINK6Q6UWN8 80 aa1.65□□□□□ -2.15
PTPRC-202ENST00000367364 CSMD3Q7Z407 3707 aa1.65□□□□□ -2.15
PTPRC-202ENST00000367364 BAHCC1Q9P281 2608 aa1.65□□□□□ -2.15
PTPRC-202ENST00000367364 CACNA1AO00555 2505 aa1.65□□□□□ -2.15
PTPRC-202ENST00000367364 FLNAP21333 2647 aaKnown RBP1.64□□□□□ -2.15
PTPRC-202ENST00000367364 KRTAP12-1P59990 96 aa1.64□□□□□ -2.15
PTPRC-202ENST00000367364 KRTAP13-2Q52LG2 175 aa1.64□□□□□ -2.15
PTPRC-202ENST00000367364 CAMK2N1Q7Z7J9 78 aa1.64□□□□□ -2.15
PTPRC-202ENST00000367364 S4R3F8 94 aa1.64□□□□□ -2.15
PTPRC-202ENST00000367364 ITPR2Q14571 2701 aa1.63□□□□□ -2.15
PTPRC-202ENST00000367364 NBEAL1Q6ZS30 2694 aa1.63□□□□□ -2.15
PTPRC-202ENST00000367364 RPS29P62273 56 aaKnown RBP1.63□□□□□ -2.15
PTPRC-202ENST00000367364 DEFB123Q8N688 67 aa1.63□□□□□ -2.15
PTPRC-202ENST00000367364 PRO2289Q9P1D8 64 aa1.63□□□□□ -2.15
PTPRC-202ENST00000367364 ZFHX2Q9C0A1 2572 aaPredicted RBP1.63□□□□□ -2.15
PTPRC-202ENST00000367364 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
PTPRC-202ENST00000367364 PDZD2O15018 2839 aa1.62□□□□□ -2.15
PTPRC-202ENST00000367364 PLAC4Q8WY50 150 aa1.62□□□□□ -2.15
PTPRC-202ENST00000367364 STAB2Q8WWQ8 2551 aa1.62□□□□□ -2.15
PTPRC-202ENST00000367364 TGP01266 2768 aa1.62□□□□□ -2.15
PTPRC-202ENST00000367364 FAM208BQ5VWN6 2430 aa1.61□□□□□ -2.15
PTPRC-202ENST00000367364 DMBT1Q9UGM3 2413 aaPredicted RBP1.61□□□□□ -2.15
PTPRC-202ENST00000367364 HECTD4Q9Y4D8 3996 aa1.61□□□□□ -2.15
PTPRC-202ENST00000367364 FLNCQ14315 2725 aa1.6□□□□□ -2.15
PTPRC-202ENST00000367364 NOTCH1P46531 2555 aa1.6□□□□□ -2.15
PTPRC-202ENST00000367364 DNAH5Q8TE73 4624 aa1.6□□□□□ -2.15
PTPRC-202ENST00000367364 MYO18BQ8IUG5 2567 aa1.59□□□□□ -2.15
PTPRC-202ENST00000367364 APLNQ9ULZ1 77 aa1.59□□□□□ -2.15
PTPRC-202ENST00000367364 TEP1Q99973 2627 aaKnown RBP1.59□□□□□ -2.16
PTPRC-202ENST00000367364 PLECQ15149 4684 aaKnown RBP1.58□□□□□ -2.16
PTPRC-202ENST00000367364 ATRQ13535 2644 aa1.58□□□□□ -2.16
PTPRC-202ENST00000367364 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
PTPRC-202ENST00000367364 SMR3AQ99954 134 aa1.57□□□□□ -2.16
PTPRC-202ENST00000367364 LRP1Q07954 4544 aaKnown RBP1.56□□□□□ -2.16
PTPRC-202ENST00000367364 APOBP04114 4563 aaKnown RBP1.56□□□□□ -2.16
PTPRC-202ENST00000367364 COL7A1Q02388 2944 aa1.56□□□□□ -2.16
PTPRC-202ENST00000367364 M0QZ58 72 aa1.56□□□□□ -2.16
PTPRC-202ENST00000367364 FLNBO75369 2602 aaKnown RBP1.56□□□□□ -2.16
PTPRC-202ENST00000367364 IGSF10Q6WRI0 2623 aa1.55□□□□□ -2.16
PTPRC-202ENST00000367364 MGAM2Q2M2H8 2515 aa1.55□□□□□ -2.16
PTPRC-202ENST00000367364 INE1O15225 51 aa1.55□□□□□ -2.16
PTPRC-202ENST00000367364 MAST4O15021 2626 aa1.55□□□□□ -2.16
PTPRC-202ENST00000367364 NSD1Q96L73 2696 aaPredicted RBP1.55□□□□□ -2.16
PTPRC-202ENST00000367364 TENM1Q9UKZ4 2725 aa1.54□□□□□ -2.16
PTPRC-202ENST00000367364 A0A0D9SG42 100 aa1.54□□□□□ -2.16
PTPRC-202ENST00000367364 USP24Q9UPU5 2620 aa1.54□□□□□ -2.16
PTPRC-202ENST00000367364 LRP1BQ9NZR2 4599 aa1.54□□□□□ -2.16
PTPRC-202ENST00000367364 FAT2Q9NYQ8 4349 aa1.53□□□□□ -2.16
PTPRC-202ENST00000367364 VPS13BQ7Z7G8 4022 aa1.53□□□□□ -2.17
PTPRC-202ENST00000367364 DYNC1H1Q14204 4646 aaKnown RBP1.52□□□□□ -2.17
PTPRC-202ENST00000367364 TNXBP22105 4242 aa1.52□□□□□ -2.17
PTPRC-202ENST00000367364 KMT2AQ03164 3969 aa1.52□□□□□ -2.17
PTPRC-202ENST00000367364 PKD1P98161 4303 aa1.52□□□□□ -2.17
PTPRC-202ENST00000367364 STARD9Q9P2P6 4700 aa1.51□□□□□ -2.17
PTPRC-202ENST00000367364 PKHD1P08F94 4074 aa1.51□□□□□ -2.17
PTPRC-202ENST00000367364 STAB1Q9NY15 2570 aa1.51□□□□□ -2.17
PTPRC-202ENST00000367364 HSPG2P98160 4391 aa1.5□□□□□ -2.17
PTPRC-202ENST00000367364 UBE2DNLQ8IWF7 75 aa1.49□□□□□ -2.17
PTPRC-202ENST00000367364 FAT3Q8TDW7 4589 aa1.48□□□□□ -2.17
PTPRC-202ENST00000367364 FAT1Q14517 4588 aa1.46□□□□□ -2.18
PTPRC-202ENST00000367364 R4GN34 69 aa1.46□□□□□ -2.18
PTPRC-202ENST00000367364 KRTAP6-3Q3LI67 103 aa1.45□□□□□ -2.18
PTPRC-202ENST00000367364 Q5VSD8 79 aa1.45□□□□□ -2.18
PTPRC-202ENST00000367364 C9orf92A6NGG3 77 aa1.44□□□□□ -2.18
PTPRC-202ENST00000367364 FLGP20930 4061 aaPredicted RBP1.43□□□□□ -2.18
PTPRC-202ENST00000367364 KRTAP10-4P60372 401 aaPredicted RBP1.42□□□□□ -2.18
PTPRC-202ENST00000367364 HERC1Q15751 4861 aa1.39□□□□□ -2.19
PTPRC-202ENST00000367364 TNP1P09430 55 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms