RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 CMYA5Q8N3K9 4069 aa4.64□□□□□ -1.67
CACNA1S-202ENST00000367338 KRTAP3-2Q9BYR7 98 aa4.63□□□□□ -1.67
CACNA1S-202ENST00000367338 ANK2Q01484 3957 aa4.62□□□□□ -1.67
CACNA1S-202ENST00000367338 DNAH2Q9P225 4427 aa4.58□□□□□ -1.68
CACNA1S-202ENST00000367338 DNAH6Q9C0G6 4158 aa4.57□□□□□ -1.68
CACNA1S-202ENST00000367338 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
CACNA1S-202ENST00000367338 STARD9Q9P2P6 4700 aa4.54□□□□□ -1.68
CACNA1S-202ENST00000367338 DNAH11Q96DT5 4516 aa4.54□□□□□ -1.68
CACNA1S-202ENST00000367338 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
CACNA1S-202ENST00000367338 DNAH8Q96JB1 4490 aa4.53□□□□□ -1.68
CACNA1S-202ENST00000367338 DNAH5Q8TE73 4624 aa4.52□□□□□ -1.69
CACNA1S-202ENST00000367338 INE1O15225 51 aa4.48□□□□□ -1.69
CACNA1S-202ENST00000367338 CSMD3Q7Z407 3707 aa4.48□□□□□ -1.69
CACNA1S-202ENST00000367338 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
CACNA1S-202ENST00000367338 DYNC1H1Q14204 4646 aaKnown RBP4.42□□□□□ -1.7
CACNA1S-202ENST00000367338 DNAH7Q8WXX0 4024 aa4.41□□□□□ -1.7
CACNA1S-202ENST00000367338 FAT2Q9NYQ8 4349 aa4.4□□□□□ -1.71
CACNA1S-202ENST00000367338 LRP1BQ9NZR2 4599 aa4.4□□□□□ -1.71
CACNA1S-202ENST00000367338 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
CACNA1S-202ENST00000367338 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
CACNA1S-202ENST00000367338 KRTAP4-5Q9BYR2 181 aa4.38□□□□□ -1.71
CACNA1S-202ENST00000367338 KMT2AQ03164 3969 aa4.38□□□□□ -1.71
CACNA1S-202ENST00000367338 COL7A1Q02388 2944 aa4.37□□□□□ -1.71
CACNA1S-202ENST00000367338 KRTAP23-1A1A580 65 aa4.36□□□□□ -1.71
CACNA1S-202ENST00000367338 KRTAP10-12P60413 245 aa4.32□□□□□ -1.72
CACNA1S-202ENST00000367338 FRAS1Q86XX4 4008 aa4.31□□□□□ -1.72
CACNA1S-202ENST00000367338 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
CACNA1S-202ENST00000367338 LYSTQ99698 3801 aa4.28□□□□□ -1.72
CACNA1S-202ENST00000367338 LORP23490 312 aaPredicted RBP4.24□□□□□ -1.73
CACNA1S-202ENST00000367338 DNHD1Q96M86 4753 aa4.23□□□□□ -1.73
CACNA1S-202ENST00000367338 FAT1Q14517 4588 aa4.22□□□□□ -1.73
CACNA1S-202ENST00000367338 KRTAP12-3P60328 96 aa4.19□□□□□ -1.74
CACNA1S-202ENST00000367338 KRTAP4-1Q9BYQ7 146 aa4.18□□□□□ -1.74
CACNA1S-202ENST00000367338 APOBP04114 4563 aaKnown RBP4.18□□□□□ -1.74
CACNA1S-202ENST00000367338 FAT3Q8TDW7 4589 aa4.12□□□□□ -1.75
CACNA1S-202ENST00000367338 PKD1P98161 4303 aa4.11□□□□□ -1.75
CACNA1S-202ENST00000367338 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.75
CACNA1S-202ENST00000367338 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
CACNA1S-202ENST00000367338 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
CACNA1S-202ENST00000367338 HYDINQ4G0P3 5121 aa4.06□□□□□ -1.76
CACNA1S-202ENST00000367338 KRTAP17-1Q9BYP8 105 aa4.05□□□□□ -1.76
CACNA1S-202ENST00000367338 RYR2Q92736 4967 aa4.04□□□□□ -1.76
CACNA1S-202ENST00000367338 SPRR2GQ9BYE4 73 aa4.04□□□□□ -1.76
CACNA1S-202ENST00000367338 RYR1P21817 5038 aa4.02□□□□□ -1.77
CACNA1S-202ENST00000367338 MT1HP80294 61 aa4.01□□□□□ -1.77
CACNA1S-202ENST00000367338 PKHD1P08F94 4074 aa3.99□□□□□ -1.77
CACNA1S-202ENST00000367338 HSPG2P98160 4391 aa3.97□□□□□ -1.77
CACNA1S-202ENST00000367338 MYCBP2O75592 4640 aa3.97□□□□□ -1.77
CACNA1S-202ENST00000367338 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
CACNA1S-202ENST00000367338 RYR3Q15413 4870 aa3.95□□□□□ -1.78
CACNA1S-202ENST00000367338 TNXBP22105 4242 aa3.94□□□□□ -1.78
CACNA1S-202ENST00000367338 MT2AP02795 61 aa3.94□□□□□ -1.78
CACNA1S-202ENST00000367338 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
CACNA1S-202ENST00000367338 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
CACNA1S-202ENST00000367338 MT1FP04733 61 aa3.88□□□□□ -1.79
CACNA1S-202ENST00000367338 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
CACNA1S-202ENST00000367338 KIAA1109Q2LD37 5005 aa3.84□□□□□ -1.79
CACNA1S-202ENST00000367338 KRTAP19-8Q3LI54 63 aa3.81□□□□□ -1.8
CACNA1S-202ENST00000367338 KRTAP19-1Q8IUB9 90 aa3.8□□□□□ -1.8
CACNA1S-202ENST00000367338 HERC1Q15751 4861 aa3.77□□□□□ -1.81
CACNA1S-202ENST00000367338 MUC17Q685J3 4493 aa3.76□□□□□ -1.81
CACNA1S-202ENST00000367338 KRTAP19-2Q3LHN2 52 aa3.74□□□□□ -1.81
CACNA1S-202ENST00000367338 LCE2CQ5TA81 110 aa3.73□□□□□ -1.81
CACNA1S-202ENST00000367338 LRP2P98164 4655 aa3.71□□□□□ -1.82
CACNA1S-202ENST00000367338 KMT2CQ8NEZ4 4911 aaKnown RBP3.69□□□□□ -1.82
CACNA1S-202ENST00000367338 KRTAP9-8Q9BYQ0 159 aa3.68□□□□□ -1.82
CACNA1S-202ENST00000367338 LPAP08519 4548 aa3.68□□□□□ -1.82
CACNA1S-202ENST00000367338 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
CACNA1S-202ENST00000367338 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
CACNA1S-202ENST00000367338 MT1XP80297 61 aa3.66□□□□□ -1.82
CACNA1S-202ENST00000367338 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
CACNA1S-202ENST00000367338 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
CACNA1S-202ENST00000367338 MT1BP07438 61 aa3.65□□□□□ -1.82
CACNA1S-202ENST00000367338 HERC2O95714 4834 aa3.64□□□□□ -1.83
CACNA1S-202ENST00000367338 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
CACNA1S-202ENST00000367338 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
CACNA1S-202ENST00000367338 KRTAP9-3Q9BYQ3 159 aa3.58□□□□□ -1.84
CACNA1S-202ENST00000367338 EPPK1P58107 5090 aaKnown RBP3.49□□□□□ -1.85
CACNA1S-202ENST00000367338 SPRR2EP22531 72 aa3.46□□□□□ -1.86
CACNA1S-202ENST00000367338 SPRR2BP35325 72 aa3.46□□□□□ -1.86
CACNA1S-202ENST00000367338 SPRR2AP35326 72 aa3.46□□□□□ -1.86
CACNA1S-202ENST00000367338 ABCA13Q86UQ4 5058 aa3.45□□□□□ -1.86
CACNA1S-202ENST00000367338 LCE2BO14633 110 aa3.37□□□□□ -1.87
CACNA1S-202ENST00000367338 LCE3BQ5TA77 95 aa3.37□□□□□ -1.87
CACNA1S-202ENST00000367338 SPRR2DP22532 72 aa3.36□□□□□ -1.87
CACNA1S-202ENST00000367338 KRTAP4-8A0A0G2JLE6 195 aa3.35□□□□□ -1.87
CACNA1S-202ENST00000367338 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
CACNA1S-202ENST00000367338 KRTAP4-8Q9BYQ9 185 aa3.35□□□□□ -1.87
CACNA1S-202ENST00000367338 PCLOQ9Y6V0 5065 aa3.35□□□□□ -1.87
CACNA1S-202ENST00000367338 MT1GP13640 62 aa3.33□□□□□ -1.88
CACNA1S-202ENST00000367338 MT1LQ93083 61 aa3.27□□□□□ -1.89
CACNA1S-202ENST00000367338 MT1EP04732 61 aa3.25□□□□□ -1.89
CACNA1S-202ENST00000367338 HMCN2Q8NDA2 5059 aa3.25□□□□□ -1.89
CACNA1S-202ENST00000367338 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
CACNA1S-202ENST00000367338 LCE2AQ5TA79 106 aaPredicted RBP3.22□□□□□ -1.89
CACNA1S-202ENST00000367338 FAT4Q6V0I7 4981 aa3.22□□□□□ -1.89
CACNA1S-202ENST00000367338 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
CACNA1S-202ENST00000367338 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
CACNA1S-202ENST00000367338 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
CACNA1S-202ENST00000367338 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms