RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 LINC00694P0DN24 101 aa-2.06□□□□□ -2.74
RNU4-28P-201ENST00000364739 HTN3P15516 51 aa-2.06□□□□□ -2.74
RNU4-28P-201ENST00000364739 CKS1BP61024 79 aa-2.06□□□□□ -2.74
RNU4-28P-201ENST00000364739 PPP3R2Q96LZ3 170 aa-2.06□□□□□ -2.74
RNU4-28P-201ENST00000364739 RERGLQ9H628 205 aa-2.06□□□□□ -2.74
RNU4-28P-201ENST00000364739 TIAM1Q13009 1591 aa-2.06□□□□□ -2.74
RNU4-28P-201ENST00000364739 ABCC3O15438 1527 aa-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 EPRSP07814 1512 aaKnown RBP-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 CEP162Q5TB80 1403 aa-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 APELAP0DMC3 54 aa-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 COPZ1P61923 177 aa-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 NREPQ16612 68 aa-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 ZNF720Q7Z2F6 126 aa-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 TOMM7Q9P0U1 55 aa-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 CACFD1Q9UGQ2 172 aa-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 PEG3Q9GZU2 1588 aa-2.07□□□□□ -2.74
RNU4-28P-201ENST00000364739 ARFGEF2Q9Y6D5 1785 aa-2.08□□□□□ -2.74
RNU4-28P-201ENST00000364739 SMCO1Q147U7 214 aa-2.08□□□□□ -2.74
RNU4-28P-201ENST00000364739 SNHG12Q9BXW3 62 aa-2.08□□□□□ -2.74
RNU4-28P-201ENST00000364739 SMIM3Q9BZL3 60 aa-2.08□□□□□ -2.74
RNU4-28P-201ENST00000364739 TMEM167BQ9NRX6 74 aa-2.08□□□□□ -2.74
RNU4-28P-201ENST00000364739 SELENOWP63302 87 aa-2.09□□□□□ -2.74
RNU4-28P-201ENST00000364739 PEA15Q15121 130 aa-2.09□□□□□ -2.74
RNU4-28P-201ENST00000364739 C8orf59Q8N0T1 100 aaPredicted RBP-2.09□□□□□ -2.74
RNU4-28P-201ENST00000364739 LINC00308Q8TCZ7 52 aa-2.09□□□□□ -2.74
RNU4-28P-201ENST00000364739 DDX60Q8IY21 1712 aaKnown RBP-2.09□□□□□ -2.74
RNU4-28P-201ENST00000364739 TFF3Q07654 80 aa-2.1□□□□□ -2.75
RNU4-28P-201ENST00000364739 COPS9Q8WXC6 57 aa-2.1□□□□□ -2.75
RNU4-28P-201ENST00000364739 PMCHL2Q9BQD1 86 aa-2.1□□□□□ -2.75
RNU4-28P-201ENST00000364739 CFAP74Q9C0B2 1584 aa-2.1□□□□□ -2.75
RNU4-28P-201ENST00000364739 PDCD5O14737 125 aa-2.11□□□□□ -2.75
RNU4-28P-201ENST00000364739 ATP5EP56381 51 aaPredicted RBP-2.11□□□□□ -2.75
RNU4-28P-201ENST00000364739 KRTDAPP60985 99 aa-2.11□□□□□ -2.75
RNU4-28P-201ENST00000364739 RPS25P62851 125 aaKnown RBP-2.11□□□□□ -2.75
RNU4-28P-201ENST00000364739 DEFB114Q30KQ6 69 aa-2.11□□□□□ -2.75
RNU4-28P-201ENST00000364739 MYO3AQ8NEV4 1616 aa-2.11□□□□□ -2.75
RNU4-28P-201ENST00000364739 URB2Q14146 1524 aaKnown RBP-2.12□□□□□ -2.75
RNU4-28P-201ENST00000364739 A0A096LPF7 62 aa-2.12□□□□□ -2.75
RNU4-28P-201ENST00000364739 NDUFA1O15239 70 aa-2.12□□□□□ -2.75
RNU4-28P-201ENST00000364739 LINC00470Q9BZP3 86 aa-2.12□□□□□ -2.75
RNU4-28P-201ENST00000364739 SPANXA1Q9NS26 97 aa-2.12□□□□□ -2.75
RNU4-28P-201ENST00000364739 H3BSH0 61 aa-2.13□□□□□ -2.75
RNU4-28P-201ENST00000364739 S100A1P23297 94 aa-2.13□□□□□ -2.75
RNU4-28P-201ENST00000364739 ENHOQ6UWT2 76 aa-2.13□□□□□ -2.75
RNU4-28P-201ENST00000364739 LSM10Q969L4 123 aaKnown RBP-2.13□□□□□ -2.75
RNU4-28P-201ENST00000364739 EFCAB6Q5THR3 1501 aa-2.13□□□□□ -2.75
RNU4-28P-201ENST00000364739 DCAF1Q9Y4B6 1507 aa-2.13□□□□□ -2.75
RNU4-28P-201ENST00000364739 KTN1Q86UP2 1357 aaKnown RBP-2.13□□□□□ -2.75
RNU4-28P-201ENST00000364739 CCDC18Q5T9S5 1454 aa-2.14□□□□□ -2.75
RNU4-28P-201ENST00000364739 H3BUX3 64 aa-2.14□□□□□ -2.75
RNU4-28P-201ENST00000364739 CATR1Q13166 79 aa-2.14□□□□□ -2.75
RNU4-28P-201ENST00000364739 IER3IP1Q9Y5U9 82 aa-2.14□□□□□ -2.75
RNU4-28P-201ENST00000364739 ADCY10Q96PN6 1610 aa-2.14□□□□□ -2.75
RNU4-28P-201ENST00000364739 PVALEFA0A1B0GWK0 134 aa-2.15□□□□□ -2.75
RNU4-28P-201ENST00000364739 HMGN2P05204 90 aaKnown RBP-2.15□□□□□ -2.75
RNU4-28P-201ENST00000364739 PAIP2BQ9ULR5 123 aaKnown RBP-2.15□□□□□ -2.75
RNU4-28P-201ENST00000364739 AGLP35573 1532 aa-2.16□□□□□ -2.75
RNU4-28P-201ENST00000364739 SYCP2Q9BX26 1530 aa-2.16□□□□□ -2.75
RNU4-28P-201ENST00000364739 J3QR89 54 aa-2.16□□□□□ -2.76
RNU4-28P-201ENST00000364739 APOC2P02655 101 aa-2.16□□□□□ -2.76
RNU4-28P-201ENST00000364739 PKIAP61925 76 aa-2.16□□□□□ -2.76
RNU4-28P-201ENST00000364739 TSTD1Q8NFU3 115 aa-2.16□□□□□ -2.76
RNU4-28P-201ENST00000364739 S100ZQ8WXG8 99 aa-2.16□□□□□ -2.76
RNU4-28P-201ENST00000364739 A0A087WWC5 75 aa-2.17□□□□□ -2.76
RNU4-28P-201ENST00000364739 UQCRHLA0A096LP55 91 aa-2.17□□□□□ -2.76
RNU4-28P-201ENST00000364739 K7ERU9 68 aa-2.17□□□□□ -2.76
RNU4-28P-201ENST00000364739 LZICQ8WZA0 190 aa-2.17□□□□□ -2.76
RNU4-28P-201ENST00000364739 CCDC167Q9P0B6 97 aa-2.17□□□□□ -2.76
RNU4-28P-201ENST00000364739 ABCA5Q8WWZ7 1642 aa-2.17□□□□□ -2.76
RNU4-28P-201ENST00000364739 AKAP12Q02952 1782 aa-2.18□□□□□ -2.76
RNU4-28P-201ENST00000364739 MYMXA0A1B0GTQ4 84 aa-2.18□□□□□ -2.76
RNU4-28P-201ENST00000364739 CEBPZOSA8MTT3 80 aa-2.18□□□□□ -2.76
RNU4-28P-201ENST00000364739 SMIM11AP58511 58 aa-2.18□□□□□ -2.76
RNU4-28P-201ENST00000364739 MEIG1Q5JSS6 88 aa-2.18□□□□□ -2.76
RNU4-28P-201ENST00000364739 ATP7AQ04656 1500 aa-2.18□□□□□ -2.76
RNU4-28P-201ENST00000364739 K7EMI3 77 aa-2.19□□□□□ -2.76
RNU4-28P-201ENST00000364739 PYDC1Q8WXC3 89 aa-2.19□□□□□ -2.76
RNU4-28P-201ENST00000364739 A0A087WXM4 84 aa-2.2□□□□□ -2.76
RNU4-28P-201ENST00000364739 ATP5EP2Q5VTU8 51 aa-2.2□□□□□ -2.76
RNU4-28P-201ENST00000364739 TSC22D3Q99576 134 aa-2.2□□□□□ -2.76
RNU4-28P-201ENST00000364739 TOP2AP11388 1531 aaKnown RBP-2.21□□□□□ -2.76
RNU4-28P-201ENST00000364739 IQGAP1P46940 1657 aa-2.22□□□□□ -2.76
RNU4-28P-201ENST00000364739 CLTCQ00610 1675 aaKnown RBP-2.22□□□□□ -2.76
RNU4-28P-201ENST00000364739 ABCC8Q09428 1581 aa-2.22□□□□□ -2.76
RNU4-28P-201ENST00000364739 ABCA8O94911 1581 aa-2.23□□□□□ -2.77
RNU4-28P-201ENST00000364739 CLTCL1P53675 1640 aa-2.23□□□□□ -2.77
RNU4-28P-201ENST00000364739 ABCA9Q8IUA7 1624 aa-2.23□□□□□ -2.77
RNU4-28P-201ENST00000364739 COL5A1-AS1Q5SY13 56 aa-2.23□□□□□ -2.77
RNU4-28P-201ENST00000364739 PFDN5Q99471 154 aa-2.23□□□□□ -2.77
RNU4-28P-201ENST00000364739 PRXQ9BXM0 1461 aa-2.23□□□□□ -2.77
RNU4-28P-201ENST00000364739 DUOX1Q9NRD9 1551 aa-2.23□□□□□ -2.77
RNU4-28P-201ENST00000364739 M0R1W7 72 aa-2.24□□□□□ -2.77
RNU4-28P-201ENST00000364739 GNGT2O14610 69 aa-2.24□□□□□ -2.77
RNU4-28P-201ENST00000364739 NDUFA2O43678 99 aa-2.24□□□□□ -2.77
RNU4-28P-201ENST00000364739 SERF2P84101 59 aa-2.24□□□□□ -2.77
RNU4-28P-201ENST00000364739 UGGT1Q9NYU2 1555 aa-2.24□□□□□ -2.77
RNU4-28P-201ENST00000364739 LINC00587B1AMM8 73 aa-2.25□□□□□ -2.77
RNU4-28P-201ENST00000364739 H0YGX0 51 aa-2.25□□□□□ -2.77
RNU4-28P-201ENST00000364739 SMIM13P0DJ93 91 aa-2.25□□□□□ -2.77
RNU4-28P-201ENST00000364739 DR1Q01658 176 aa-2.25□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 268 ms