RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 DNAH9Q9NYC9 4486 aa8.8□□□□□ -1
CDC42BPB-201ENST00000361246 KRTAP3-2Q9BYR7 98 aa8.77□□□□□ -1.01
CDC42BPB-201ENST00000361246 KRTAP12-3P60328 96 aa8.75□□□□□ -1.01
CDC42BPB-201ENST00000361246 KRTAP8-1Q8IUC2 63 aa8.74□□□□□ -1.01
CDC42BPB-201ENST00000361246 DNAH1Q9P2D7 4330 aa8.65□□□□□ -1.02
CDC42BPB-201ENST00000361246 KRTAP10-5P60370 271 aa8.57□□□□□ -1.04
CDC42BPB-201ENST00000361246 DNAH10Q8IVF4 4471 aa8.48□□□□□ -1.05
CDC42BPB-201ENST00000361246 KRTAP4-1Q9BYQ7 146 aa8.44□□□□□ -1.06
CDC42BPB-201ENST00000361246 DNAH2Q9P225 4427 aa8.42□□□□□ -1.06
CDC42BPB-201ENST00000361246 MT1HP80294 61 aa8.4□□□□□ -1.07
CDC42BPB-201ENST00000361246 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
CDC42BPB-201ENST00000361246 DNAH3Q8TD57 4116 aa8.36□□□□□ -1.07
CDC42BPB-201ENST00000361246 ANK2Q01484 3957 aa8.35□□□□□ -1.07
CDC42BPB-201ENST00000361246 FRAS1Q86XX4 4008 aa8.33□□□□□ -1.08
CDC42BPB-201ENST00000361246 PLECQ15149 4684 aaKnown RBP8.3□□□□□ -1.08
CDC42BPB-201ENST00000361246 DNAH5Q8TE73 4624 aa8.29□□□□□ -1.08
CDC42BPB-201ENST00000361246 SPRR2FQ96RM1 72 aa8.26□□□□□ -1.09
CDC42BPB-201ENST00000361246 FAT2Q9NYQ8 4349 aa8.26□□□□□ -1.09
CDC42BPB-201ENST00000361246 INE1O15225 51 aa8.24□□□□□ -1.09
CDC42BPB-201ENST00000361246 VPS13BQ7Z7G8 4022 aa8.22□□□□□ -1.09
CDC42BPB-201ENST00000361246 CMYA5Q8N3K9 4069 aa8.17□□□□□ -1.1
CDC42BPB-201ENST00000361246 DNAH11Q96DT5 4516 aa8.16□□□□□ -1.1
CDC42BPB-201ENST00000361246 MT2AP02795 61 aa8.11□□□□□ -1.11
CDC42BPB-201ENST00000361246 STARD9Q9P2P6 4700 aa8.1□□□□□ -1.11
CDC42BPB-201ENST00000361246 PRKDCP78527 4128 aaKnown RBP8.07□□□□□ -1.12
CDC42BPB-201ENST00000361246 VPS13DQ5THJ4 4388 aa8.06□□□□□ -1.12
CDC42BPB-201ENST00000361246 LYSTQ99698 3801 aa8.05□□□□□ -1.12
CDC42BPB-201ENST00000361246 LRP1BQ9NZR2 4599 aa8.04□□□□□ -1.12
CDC42BPB-201ENST00000361246 MT1FP04733 61 aa8.01□□□□□ -1.13
CDC42BPB-201ENST00000361246 DNAH17Q9UFH2 4485 aa8.01□□□□□ -1.13
CDC42BPB-201ENST00000361246 DNAH7Q8WXX0 4024 aa8.01□□□□□ -1.13
CDC42BPB-201ENST00000361246 KRTAP10-7P60409 375 aaPredicted RBP8□□□□□ -1.13
CDC42BPB-201ENST00000361246 DYNC2H1Q8NCM8 4307 aaKnown RBP7.98□□□□□ -1.13
CDC42BPB-201ENST00000361246 DNAH8Q96JB1 4490 aa7.98□□□□□ -1.13
CDC42BPB-201ENST00000361246 KRTAP19-5Q3LI72 72 aa7.95□□□□□ -1.14
CDC42BPB-201ENST00000361246 KRTAP23-1A1A580 65 aa7.92□□□□□ -1.14
CDC42BPB-201ENST00000361246 SPRR2EP22531 72 aa7.87□□□□□ -1.15
CDC42BPB-201ENST00000361246 SPRR2BP35325 72 aa7.87□□□□□ -1.15
CDC42BPB-201ENST00000361246 SPRR2AP35326 72 aa7.87□□□□□ -1.15
CDC42BPB-201ENST00000361246 FAT1Q14517 4588 aa7.86□□□□□ -1.15
CDC42BPB-201ENST00000361246 DNAH6Q9C0G6 4158 aa7.85□□□□□ -1.15
CDC42BPB-201ENST00000361246 SACSQ9NZJ4 4579 aa7.79□□□□□ -1.16
CDC42BPB-201ENST00000361246 DNHD1Q96M86 4753 aa7.77□□□□□ -1.17
CDC42BPB-201ENST00000361246 SPRR2GQ9BYE4 73 aa7.76□□□□□ -1.17
CDC42BPB-201ENST00000361246 DYNC1H1Q14204 4646 aaKnown RBP7.75□□□□□ -1.17
CDC42BPB-201ENST00000361246 KRTAP17-1Q9BYP8 105 aa7.64□□□□□ -1.19
CDC42BPB-201ENST00000361246 LCE3CQ5T5A8 94 aa7.59□□□□□ -1.2
CDC42BPB-201ENST00000361246 SPRR2DP22532 72 aa7.57□□□□□ -1.2
CDC42BPB-201ENST00000361246 HECTD4Q9Y4D8 3996 aa7.57□□□□□ -1.2
CDC42BPB-201ENST00000361246 LCE3BQ5TA77 95 aa7.53□□□□□ -1.2
CDC42BPB-201ENST00000361246 RYR1P21817 5038 aa7.52□□□□□ -1.21
CDC42BPB-201ENST00000361246 APOBP04114 4563 aaKnown RBP7.47□□□□□ -1.21
CDC42BPB-201ENST00000361246 MT1GP13640 62 aa7.41□□□□□ -1.22
CDC42BPB-201ENST00000361246 LCE2BO14633 110 aa7.4□□□□□ -1.22
CDC42BPB-201ENST00000361246 LPAP08519 4548 aa7.39□□□□□ -1.23
CDC42BPB-201ENST00000361246 FAT3Q8TDW7 4589 aa7.38□□□□□ -1.23
CDC42BPB-201ENST00000361246 HSPG2P98160 4391 aa7.33□□□□□ -1.24
CDC42BPB-201ENST00000361246 KRTAP4-8A0A0G2JLE6 195 aa7.32□□□□□ -1.24
CDC42BPB-201ENST00000361246 KRTAP4-8Q9BYQ9 185 aa7.32□□□□□ -1.24
CDC42BPB-201ENST00000361246 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
CDC42BPB-201ENST00000361246 LRP1Q07954 4544 aaKnown RBP7.26□□□□□ -1.25
CDC42BPB-201ENST00000361246 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
CDC42BPB-201ENST00000361246 MT1XP80297 61 aa7.18□□□□□ -1.26
CDC42BPB-201ENST00000361246 PKHD1P08F94 4074 aa7.18□□□□□ -1.26
CDC42BPB-201ENST00000361246 PKHD1L1Q86WI1 4243 aa7.16□□□□□ -1.26
CDC42BPB-201ENST00000361246 RYR3Q15413 4870 aa7.15□□□□□ -1.26
CDC42BPB-201ENST00000361246 PKD1P98161 4303 aa7.14□□□□□ -1.27
CDC42BPB-201ENST00000361246 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
CDC42BPB-201ENST00000361246 KRTAP9-8Q9BYQ0 159 aa7.1□□□□□ -1.27
CDC42BPB-201ENST00000361246 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
CDC42BPB-201ENST00000361246 MT1BP07438 61 aa7.06□□□□□ -1.28
CDC42BPB-201ENST00000361246 LCE2CQ5TA81 110 aa6.97□□□□□ -1.29
CDC42BPB-201ENST00000361246 MT4P47944 62 aa6.96□□□□□ -1.3
CDC42BPB-201ENST00000361246 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
CDC42BPB-201ENST00000361246 LCE2DQ5TA82 110 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPB-201ENST00000361246 TNXBP22105 4242 aa6.92□□□□□ -1.3
CDC42BPB-201ENST00000361246 KRTAP4-7Q9BYR0 210 aa6.88□□□□□ -1.31
CDC42BPB-201ENST00000361246 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
CDC42BPB-201ENST00000361246 KRTAP9-2Q9BYQ4 174 aa6.81□□□□□ -1.32
CDC42BPB-201ENST00000361246 LRP2P98164 4655 aa6.71□□□□□ -1.34
CDC42BPB-201ENST00000361246 LCE3DQ9BYE3 92 aa6.71□□□□□ -1.34
CDC42BPB-201ENST00000361246 SPRR5A0A1B0GTR4 108 aa6.69□□□□□ -1.34
CDC42BPB-201ENST00000361246 KRTAP19-3Q7Z4W3 81 aa6.66□□□□□ -1.34
CDC42BPB-201ENST00000361246 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
CDC42BPB-201ENST00000361246 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
CDC42BPB-201ENST00000361246 FLGP20930 4061 aaPredicted RBP6.59□□□□□ -1.35
CDC42BPB-201ENST00000361246 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
CDC42BPB-201ENST00000361246 LCE1BQ5T7P3 118 aa6.51□□□□□ -1.37
CDC42BPB-201ENST00000361246 MT1LQ93083 61 aa6.5□□□□□ -1.37
CDC42BPB-201ENST00000361246 LCE3EQ5T5B0 92 aa6.48□□□□□ -1.37
CDC42BPB-201ENST00000361246 RYR2Q92736 4967 aa6.48□□□□□ -1.37
CDC42BPB-201ENST00000361246 KIAA1109Q2LD37 5005 aa6.47□□□□□ -1.37
CDC42BPB-201ENST00000361246 MT1EP04732 61 aa6.46□□□□□ -1.38
CDC42BPB-201ENST00000361246 HERC2O95714 4834 aa6.46□□□□□ -1.38
CDC42BPB-201ENST00000361246 KRTAP9-6A0A140TA67 174 aa6.44□□□□□ -1.38
CDC42BPB-201ENST00000361246 LCE1DQ5T752 114 aa6.44□□□□□ -1.38
CDC42BPB-201ENST00000361246 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
CDC42BPB-201ENST00000361246 MT1MQ8N339 61 aa6.33□□□□□ -1.4
CDC42BPB-201ENST00000361246 KRTAP19-2Q3LHN2 52 aa6.31□□□□□ -1.4
CDC42BPB-201ENST00000361246 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms