RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 DNAH11Q96DT5 4516 aa2.38□□□□□ -2.03
CNGA1-201ENST00000358519 DYNC1H1Q14204 4646 aaKnown RBP2.38□□□□□ -2.03
CNGA1-201ENST00000358519 ROMO1P60602 79 aa2.38□□□□□ -2.03
CNGA1-201ENST00000358519 A0A096LNI7 61 aa2.37□□□□□ -2.03
CNGA1-201ENST00000358519 SSBP3-AS1Q7Z2R9 100 aa2.37□□□□□ -2.03
CNGA1-201ENST00000358519 IGLV5-52A0A0A0MRZ9 124 aa2.37□□□□□ -2.03
CNGA1-201ENST00000358519 ZNF861PO60384 105 aa2.37□□□□□ -2.03
CNGA1-201ENST00000358519 C8orf17Q9NRJ1 99 aa2.37□□□□□ -2.03
CNGA1-201ENST00000358519 KMT2AQ03164 3969 aa2.36□□□□□ -2.03
CNGA1-201ENST00000358519 IGHV6-1A0A0B4J1U7 121 aa2.36□□□□□ -2.03
CNGA1-201ENST00000358519 Q96NJ1 140 aa2.36□□□□□ -2.03
CNGA1-201ENST00000358519 PKHD1P08F94 4074 aa2.35□□□□□ -2.03
CNGA1-201ENST00000358519 MRPL34Q9BQ48 92 aaKnown RBP2.35□□□□□ -2.03
CNGA1-201ENST00000358519 HSPG2P98160 4391 aa2.34□□□□□ -2.03
CNGA1-201ENST00000358519 Q5W150 140 aa2.34□□□□□ -2.03
CNGA1-201ENST00000358519 DMAC1Q96GE9 116 aa2.34□□□□□ -2.03
CNGA1-201ENST00000358519 Q5VSD8 79 aa2.34□□□□□ -2.04
CNGA1-201ENST00000358519 SPINK6Q6UWN8 80 aa2.34□□□□□ -2.04
CNGA1-201ENST00000358519 DNAH17Q9UFH2 4485 aa2.34□□□□□ -2.04
CNGA1-201ENST00000358519 A0A1B0GVX0 72 aa2.33□□□□□ -2.04
CNGA1-201ENST00000358519 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
CNGA1-201ENST00000358519 NOTCH2NLQ7Z3S9 236 aa2.33□□□□□ -2.04
CNGA1-201ENST00000358519 IGLV7-43P04211 117 aa2.33□□□□□ -2.04
CNGA1-201ENST00000358519 CHTF8P0CG12 524 aa2.33□□□□□ -2.04
CNGA1-201ENST00000358519 P0C880 135 aa2.32□□□□□ -2.04
CNGA1-201ENST00000358519 KRTAP13-3Q3SY46 172 aa2.32□□□□□ -2.04
CNGA1-201ENST00000358519 VPS13DQ5THJ4 4388 aa2.32□□□□□ -2.04
CNGA1-201ENST00000358519 KRTAP11-1Q8IUC1 163 aa2.31□□□□□ -2.04
CNGA1-201ENST00000358519 FAT2Q9NYQ8 4349 aa2.31□□□□□ -2.04
CNGA1-201ENST00000358519 IGLV9-49A0A0B4J1Y8 123 aa2.3□□□□□ -2.04
CNGA1-201ENST00000358519 A8MUU9 505 aa2.3□□□□□ -2.04
CNGA1-201ENST00000358519 PKD1P98161 4303 aa2.3□□□□□ -2.04
CNGA1-201ENST00000358519 DNAH2Q9P225 4427 aa2.3□□□□□ -2.04
CNGA1-201ENST00000358519 FLG2Q5D862 2391 aaPredicted RBP2.29□□□□□ -2.04
CNGA1-201ENST00000358519 SEC61BP60468 96 aaKnown RBP2.29□□□□□ -2.04
CNGA1-201ENST00000358519 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
CNGA1-201ENST00000358519 PSORS1C2Q9UIG4 136 aa2.29□□□□□ -2.04
CNGA1-201ENST00000358519 HMCN2Q8NDA2 5059 aa2.29□□□□□ -2.04
CNGA1-201ENST00000358519 SPINK1P00995 79 aa2.28□□□□□ -2.04
CNGA1-201ENST00000358519 APOBP04114 4563 aaKnown RBP2.27□□□□□ -2.05
CNGA1-201ENST00000358519 SMR3BP02814 79 aaPredicted RBP2.26□□□□□ -2.05
CNGA1-201ENST00000358519 CRIPTQ9P021 101 aa2.26□□□□□ -2.05
CNGA1-201ENST00000358519 CIRBP-AS1Q8TBR5 109 aa2.26□□□□□ -2.05
CNGA1-201ENST00000358519 RNF213Q63HN8 5207 aa2.26□□□□□ -2.05
CNGA1-201ENST00000358519 LRP1BQ9NZR2 4599 aa2.26□□□□□ -2.05
CNGA1-201ENST00000358519 H0YAA0 97 aa2.25□□□□□ -2.05
CNGA1-201ENST00000358519 MYCBP2O75592 4640 aa2.25□□□□□ -2.05
CNGA1-201ENST00000358519 KRTAP23-1A1A580 65 aa2.25□□□□□ -2.05
CNGA1-201ENST00000358519 IGKV2-30P06310 120 aa2.25□□□□□ -2.05
CNGA1-201ENST00000358519 DNAH5Q8TE73 4624 aa2.25□□□□□ -2.05
CNGA1-201ENST00000358519 VPS13BQ7Z7G8 4022 aa2.24□□□□□ -2.05
CNGA1-201ENST00000358519 KRTAP10-1P60331 282 aa2.23□□□□□ -2.05
CNGA1-201ENST00000358519 ANAPC11Q9NYG5 84 aa2.23□□□□□ -2.05
CNGA1-201ENST00000358519 NDUFAF8A1L188 74 aa2.22□□□□□ -2.05
CNGA1-201ENST00000358519 PANO1I0J062 215 aa2.22□□□□□ -2.05
CNGA1-201ENST00000358519 KRTAP16-1A8MUX0 517 aa2.22□□□□□ -2.05
CNGA1-201ENST00000358519 SPINT4Q6UDR6 99 aa2.22□□□□□ -2.05
CNGA1-201ENST00000358519 IGKV2D-30A0A075B6S6 120 aa2.21□□□□□ -2.05
CNGA1-201ENST00000358519 C20orf166-AS1Q96NR2 134 aa2.21□□□□□ -2.05
CNGA1-201ENST00000358519 KRTAP1-4P0C5Y4 121 aa2.21□□□□□ -2.06
CNGA1-201ENST00000358519 A0A1B0GU33 70 aa2.21□□□□□ -2.06
CNGA1-201ENST00000358519 TYMSOSQ8TAI1 123 aa2.2□□□□□ -2.06
CNGA1-201ENST00000358519 KRTAP10-4P60372 401 aaPredicted RBP2.19□□□□□ -2.06
CNGA1-201ENST00000358519 K7ERS5 55 aa2.19□□□□□ -2.06
CNGA1-201ENST00000358519 FAT1Q14517 4588 aa2.18□□□□□ -2.06
CNGA1-201ENST00000358519 DNAH8Q96JB1 4490 aa2.18□□□□□ -2.06
CNGA1-201ENST00000358519 H1FX-AS1Q4G0G2 97 aa2.18□□□□□ -2.06
CNGA1-201ENST00000358519 TPRXLQ17RH7 258 aa2.17□□□□□ -2.06
CNGA1-201ENST00000358519 KRTAP13-2Q52LG2 175 aa2.17□□□□□ -2.06
CNGA1-201ENST00000358519 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
CNGA1-201ENST00000358519 KRTAP4-3Q9BYR4 195 aa2.17□□□□□ -2.06
CNGA1-201ENST00000358519 PKHD1L1Q86WI1 4243 aa2.16□□□□□ -2.06
CNGA1-201ENST00000358519 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
CNGA1-201ENST00000358519 KRTAP10-8P60410 259 aa2.16□□□□□ -2.06
CNGA1-201ENST00000358519 KRTAP9-6A8MVA2 160 aa2.14□□□□□ -2.07
CNGA1-201ENST00000358519 CRCT1Q9UGL9 99 aa2.14□□□□□ -2.07
CNGA1-201ENST00000358519 LRP2P98164 4655 aa2.14□□□□□ -2.07
CNGA1-201ENST00000358519 COX6B2Q6YFQ2 88 aa2.13□□□□□ -2.07
CNGA1-201ENST00000358519 C10orf95Q9H7T3 257 aa2.13□□□□□ -2.07
CNGA1-201ENST00000358519 MT1HL1P0DM35 61 aa2.12□□□□□ -2.07
CNGA1-201ENST00000358519 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
CNGA1-201ENST00000358519 MUC2Q02817 5179 aa2.12□□□□□ -2.07
CNGA1-201ENST00000358519 RPL37P61927 97 aaKnown RBP2.11□□□□□ -2.07
CNGA1-201ENST00000358519 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
CNGA1-201ENST00000358519 FAT3Q8TDW7 4589 aa2.1□□□□□ -2.07
CNGA1-201ENST00000358519 LRP1Q07954 4544 aaKnown RBP2.1□□□□□ -2.07
CNGA1-201ENST00000358519 KRTAP10-5P60370 271 aa2.1□□□□□ -2.07
CNGA1-201ENST00000358519 A0A0D9SG42 100 aa2.08□□□□□ -2.08
CNGA1-201ENST00000358519 KRTAP13-4Q3LI77 160 aa2.06□□□□□ -2.08
CNGA1-201ENST00000358519 TNXBP22105 4242 aa2.06□□□□□ -2.08
CNGA1-201ENST00000358519 FSIP2Q5CZC0 6907 aa2.04□□□□□ -2.08
CNGA1-201ENST00000358519 S4R3F8 94 aa2.04□□□□□ -2.08
CNGA1-201ENST00000358519 KRTAP12-2P59991 146 aa2.02□□□□□ -2.09
CNGA1-201ENST00000358519 C9orf92A6NGG3 77 aa2□□□□□ -2.09
CNGA1-201ENST00000358519 PLAC4Q8WY50 150 aa1.99□□□□□ -2.09
CNGA1-201ENST00000358519 KRTAP12-1P59990 96 aa1.98□□□□□ -2.09
CNGA1-201ENST00000358519 MT3P25713 68 aa1.96□□□□□ -2.1
CNGA1-201ENST00000358519 LPAP08519 4548 aa1.95□□□□□ -2.1
CNGA1-201ENST00000358519 KRTAP10-12P60413 245 aa1.94□□□□□ -2.1
CNGA1-201ENST00000358519 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms