RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 DNAH5Q8TE73 4624 aa6.7□□□□□ -1.34
TRAPPC11-202ENST00000357207 DNAH9Q9NYC9 4486 aa6.7□□□□□ -1.34
TRAPPC11-202ENST00000357207 DNAH11Q96DT5 4516 aa6.68□□□□□ -1.34
TRAPPC11-202ENST00000357207 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
TRAPPC11-202ENST00000357207 DNAH1Q9P2D7 4330 aa6.64□□□□□ -1.35
TRAPPC11-202ENST00000357207 LCE3AQ5TA76 89 aa6.63□□□□□ -1.35
TRAPPC11-202ENST00000357207 PLECQ15149 4684 aaKnown RBP6.63□□□□□ -1.35
TRAPPC11-202ENST00000357207 DNAH10Q8IVF4 4471 aa6.62□□□□□ -1.35
TRAPPC11-202ENST00000357207 FAT1Q14517 4588 aa6.51□□□□□ -1.37
TRAPPC11-202ENST00000357207 DNAH17Q9UFH2 4485 aa6.5□□□□□ -1.37
TRAPPC11-202ENST00000357207 DNAH8Q96JB1 4490 aa6.48□□□□□ -1.37
TRAPPC11-202ENST00000357207 VPS13DQ5THJ4 4388 aa6.47□□□□□ -1.37
TRAPPC11-202ENST00000357207 DNAH2Q9P225 4427 aa6.44□□□□□ -1.38
TRAPPC11-202ENST00000357207 ALMS1Q8TCU4 4167 aa6.44□□□□□ -1.38
TRAPPC11-202ENST00000357207 KRTAP4-1Q9BYQ7 146 aa6.42□□□□□ -1.38
TRAPPC11-202ENST00000357207 DNHD1Q96M86 4753 aa6.39□□□□□ -1.39
TRAPPC11-202ENST00000357207 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
TRAPPC11-202ENST00000357207 DYNC1H1Q14204 4646 aaKnown RBP6.37□□□□□ -1.39
TRAPPC11-202ENST00000357207 CRCT1Q9UGL9 99 aa6.35□□□□□ -1.39
TRAPPC11-202ENST00000357207 STARD9Q9P2P6 4700 aa6.3□□□□□ -1.4
TRAPPC11-202ENST00000357207 ANK2Q01484 3957 aa6.25□□□□□ -1.41
TRAPPC11-202ENST00000357207 SACSQ9NZJ4 4579 aa6.23□□□□□ -1.41
TRAPPC11-202ENST00000357207 RYR1P21817 5038 aa6.23□□□□□ -1.41
TRAPPC11-202ENST00000357207 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
TRAPPC11-202ENST00000357207 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
TRAPPC11-202ENST00000357207 DYNC2H1Q8NCM8 4307 aaKnown RBP6.16□□□□□ -1.42
TRAPPC11-202ENST00000357207 DNAH3Q8TD57 4116 aa6.13□□□□□ -1.43
TRAPPC11-202ENST00000357207 MT2AP02795 61 aa6.13□□□□□ -1.43
TRAPPC11-202ENST00000357207 APOBP04114 4563 aaKnown RBP6.12□□□□□ -1.43
TRAPPC11-202ENST00000357207 MT1HP80294 61 aa6.11□□□□□ -1.43
TRAPPC11-202ENST00000357207 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.43
TRAPPC11-202ENST00000357207 FAT2Q9NYQ8 4349 aa6.07□□□□□ -1.44
TRAPPC11-202ENST00000357207 KRTAP8-1Q8IUC2 63 aa6.07□□□□□ -1.44
TRAPPC11-202ENST00000357207 PRKDCP78527 4128 aaKnown RBP6.06□□□□□ -1.44
TRAPPC11-202ENST00000357207 KRTAP10-5P60370 271 aa6.06□□□□□ -1.44
TRAPPC11-202ENST00000357207 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
TRAPPC11-202ENST00000357207 KMT2AQ03164 3969 aa6.04□□□□□ -1.44
TRAPPC11-202ENST00000357207 MT1FP04733 61 aa6.02□□□□□ -1.45
TRAPPC11-202ENST00000357207 LYSTQ99698 3801 aa6.02□□□□□ -1.45
TRAPPC11-202ENST00000357207 KIAA1109Q2LD37 5005 aa6.01□□□□□ -1.45
TRAPPC11-202ENST00000357207 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
TRAPPC11-202ENST00000357207 LRP1Q07954 4544 aaKnown RBP5.9□□□□□ -1.47
TRAPPC11-202ENST00000357207 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
TRAPPC11-202ENST00000357207 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
TRAPPC11-202ENST00000357207 FAT3Q8TDW7 4589 aa5.87□□□□□ -1.47
TRAPPC11-202ENST00000357207 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.47
TRAPPC11-202ENST00000357207 FRAS1Q86XX4 4008 aa5.84□□□□□ -1.47
TRAPPC11-202ENST00000357207 RYR3Q15413 4870 aa5.81□□□□□ -1.48
TRAPPC11-202ENST00000357207 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
TRAPPC11-202ENST00000357207 DNAH6Q9C0G6 4158 aa5.77□□□□□ -1.49
TRAPPC11-202ENST00000357207 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
TRAPPC11-202ENST00000357207 HECTD4Q9Y4D8 3996 aa5.76□□□□□ -1.49
TRAPPC11-202ENST00000357207 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC11-202ENST00000357207 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
TRAPPC11-202ENST00000357207 LRP2P98164 4655 aa5.72□□□□□ -1.49
TRAPPC11-202ENST00000357207 DNAH7Q8WXX0 4024 aa5.7□□□□□ -1.5
TRAPPC11-202ENST00000357207 RYR2Q92736 4967 aa5.69□□□□□ -1.5
TRAPPC11-202ENST00000357207 MT1XP80297 61 aa5.66□□□□□ -1.5
TRAPPC11-202ENST00000357207 KMT2CQ8NEZ4 4911 aaKnown RBP5.65□□□□□ -1.51
TRAPPC11-202ENST00000357207 MT1BP07438 61 aa5.6□□□□□ -1.51
TRAPPC11-202ENST00000357207 HYDINQ4G0P3 5121 aa5.58□□□□□ -1.52
TRAPPC11-202ENST00000357207 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
TRAPPC11-202ENST00000357207 SPRR2FQ96RM1 72 aa5.54□□□□□ -1.52
TRAPPC11-202ENST00000357207 HERC2O95714 4834 aa5.5□□□□□ -1.53
TRAPPC11-202ENST00000357207 LCE2CQ5TA81 110 aa5.49□□□□□ -1.53
TRAPPC11-202ENST00000357207 PKHD1P08F94 4074 aa5.45□□□□□ -1.54
TRAPPC11-202ENST00000357207 PKD1P98161 4303 aa5.44□□□□□ -1.54
TRAPPC11-202ENST00000357207 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
TRAPPC11-202ENST00000357207 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
TRAPPC11-202ENST00000357207 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
TRAPPC11-202ENST00000357207 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
TRAPPC11-202ENST00000357207 KRTAP19-2Q3LHN2 52 aa5.37□□□□□ -1.55
TRAPPC11-202ENST00000357207 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
TRAPPC11-202ENST00000357207 HSPG2P98160 4391 aa5.35□□□□□ -1.55
TRAPPC11-202ENST00000357207 BIRC6Q9NR09 4857 aa5.32□□□□□ -1.56
TRAPPC11-202ENST00000357207 MT1GP13640 62 aa5.31□□□□□ -1.56
TRAPPC11-202ENST00000357207 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
TRAPPC11-202ENST00000357207 MUC17Q685J3 4493 aa5.3□□□□□ -1.56
TRAPPC11-202ENST00000357207 LPAP08519 4548 aa5.29□□□□□ -1.56
TRAPPC11-202ENST00000357207 PCLOQ9Y6V0 5065 aa5.29□□□□□ -1.56
TRAPPC11-202ENST00000357207 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
TRAPPC11-202ENST00000357207 HERC1Q15751 4861 aa5.25□□□□□ -1.57
TRAPPC11-202ENST00000357207 KRTAP4-7Q9BYR0 210 aa5.17□□□□□ -1.58
TRAPPC11-202ENST00000357207 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC11-202ENST00000357207 MT1LQ93083 61 aa5.12□□□□□ -1.59
TRAPPC11-202ENST00000357207 LCE2BO14633 110 aa5.11□□□□□ -1.59
TRAPPC11-202ENST00000357207 PKHD1L1Q86WI1 4243 aa5.11□□□□□ -1.59
TRAPPC11-202ENST00000357207 LCE3DQ9BYE3 92 aa5.1□□□□□ -1.59
TRAPPC11-202ENST00000357207 TNXBP22105 4242 aa5.09□□□□□ -1.59
TRAPPC11-202ENST00000357207 ABCA13Q86UQ4 5058 aa5.07□□□□□ -1.6
TRAPPC11-202ENST00000357207 MT1EP04732 61 aa5.06□□□□□ -1.6
TRAPPC11-202ENST00000357207 SPRR2EP22531 72 aa5.04□□□□□ -1.6
TRAPPC11-202ENST00000357207 SPRR2BP35325 72 aa5.04□□□□□ -1.6
TRAPPC11-202ENST00000357207 SPRR2AP35326 72 aa5.04□□□□□ -1.6
TRAPPC11-202ENST00000357207 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
TRAPPC11-202ENST00000357207 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.61
TRAPPC11-202ENST00000357207 UBR4Q5T4S7 5183 aa4.99□□□□□ -1.61
TRAPPC11-202ENST00000357207 HMCN2Q8NDA2 5059 aa4.88□□□□□ -1.63
TRAPPC11-202ENST00000357207 SPRR2DP22532 72 aa4.86□□□□□ -1.63
TRAPPC11-202ENST00000357207 MT1MQ8N339 61 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms