RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 DNAH6Q9C0G6 4158 aa2.99□□□□□ -1.93
TRIM38-201ENST00000357085 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
TRIM38-201ENST00000357085 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
TRIM38-201ENST00000357085 HUWE1Q7Z6Z7 4374 aaKnown RBP2.92□□□□□ -1.94
TRIM38-201ENST00000357085 DNAH10Q8IVF4 4471 aa2.91□□□□□ -1.94
TRIM38-201ENST00000357085 DNAH1Q9P2D7 4330 aa2.88□□□□□ -1.95
TRIM38-201ENST00000357085 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
TRIM38-201ENST00000357085 DNAH2Q9P225 4427 aa2.88□□□□□ -1.95
TRIM38-201ENST00000357085 FRAS1Q86XX4 4008 aa2.86□□□□□ -1.95
TRIM38-201ENST00000357085 PKHD1P08F94 4074 aa2.85□□□□□ -1.95
TRIM38-201ENST00000357085 DYNC2H1Q8NCM8 4307 aaKnown RBP2.84□□□□□ -1.95
TRIM38-201ENST00000357085 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
TRIM38-201ENST00000357085 KMT2AQ03164 3969 aa2.8□□□□□ -1.96
TRIM38-201ENST00000357085 VPS13BQ7Z7G8 4022 aa2.79□□□□□ -1.96
TRIM38-201ENST00000357085 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
TRIM38-201ENST00000357085 DNAH11Q96DT5 4516 aa2.78□□□□□ -1.96
TRIM38-201ENST00000357085 DNAH17Q9UFH2 4485 aa2.77□□□□□ -1.97
TRIM38-201ENST00000357085 PLECQ15149 4684 aaKnown RBP2.77□□□□□ -1.97
TRIM38-201ENST00000357085 DNAH8Q96JB1 4490 aa2.76□□□□□ -1.97
TRIM38-201ENST00000357085 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
TRIM38-201ENST00000357085 PRKDCP78527 4128 aaKnown RBP2.76□□□□□ -1.97
TRIM38-201ENST00000357085 LORP23490 312 aaPredicted RBP2.76□□□□□ -1.97
TRIM38-201ENST00000357085 VPS13DQ5THJ4 4388 aa2.75□□□□□ -1.97
TRIM38-201ENST00000357085 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
TRIM38-201ENST00000357085 STARD9Q9P2P6 4700 aa2.74□□□□□ -1.97
TRIM38-201ENST00000357085 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
TRIM38-201ENST00000357085 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
TRIM38-201ENST00000357085 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
TRIM38-201ENST00000357085 DNAH9Q9NYC9 4486 aa2.71□□□□□ -1.98
TRIM38-201ENST00000357085 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
TRIM38-201ENST00000357085 DYNC1H1Q14204 4646 aaKnown RBP2.63□□□□□ -1.99
TRIM38-201ENST00000357085 DNAH5Q8TE73 4624 aa2.63□□□□□ -1.99
TRIM38-201ENST00000357085 SACSQ9NZJ4 4579 aa2.57□□□□□ -2
TRIM38-201ENST00000357085 PKHD1L1Q86WI1 4243 aa2.56□□□□□ -2
TRIM38-201ENST00000357085 FAT2Q9NYQ8 4349 aa2.55□□□□□ -2
TRIM38-201ENST00000357085 PKD1P98161 4303 aa2.55□□□□□ -2
TRIM38-201ENST00000357085 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
TRIM38-201ENST00000357085 LRP1BQ9NZR2 4599 aa2.53□□□□□ -2
TRIM38-201ENST00000357085 KRTAP19-8Q3LI54 63 aa2.52□□□□□ -2.01
TRIM38-201ENST00000357085 RYR1P21817 5038 aa2.51□□□□□ -2.01
TRIM38-201ENST00000357085 APOBP04114 4563 aaKnown RBP2.5□□□□□ -2.01
TRIM38-201ENST00000357085 KRTAP4-1Q9BYQ7 146 aa2.48□□□□□ -2.01
TRIM38-201ENST00000357085 LRP1Q07954 4544 aaKnown RBP2.46□□□□□ -2.02
TRIM38-201ENST00000357085 FAT1Q14517 4588 aa2.46□□□□□ -2.02
TRIM38-201ENST00000357085 TNXBP22105 4242 aa2.45□□□□□ -2.02
TRIM38-201ENST00000357085 KRTAP19-1Q8IUB9 90 aa2.41□□□□□ -2.02
TRIM38-201ENST00000357085 MT2AP02795 61 aa2.4□□□□□ -2.02
TRIM38-201ENST00000357085 HSPG2P98160 4391 aa2.4□□□□□ -2.03
TRIM38-201ENST00000357085 FAT3Q8TDW7 4589 aa2.39□□□□□ -2.03
TRIM38-201ENST00000357085 MYCBP2O75592 4640 aa2.38□□□□□ -2.03
TRIM38-201ENST00000357085 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
TRIM38-201ENST00000357085 MT1XP80297 61 aa2.36□□□□□ -2.03
TRIM38-201ENST00000357085 KRTAP10-5P60370 271 aa2.36□□□□□ -2.03
TRIM38-201ENST00000357085 MT1HP80294 61 aa2.36□□□□□ -2.03
TRIM38-201ENST00000357085 KRTAP17-1Q9BYP8 105 aa2.36□□□□□ -2.03
TRIM38-201ENST00000357085 MT3P25713 68 aa2.35□□□□□ -2.03
TRIM38-201ENST00000357085 LCE2DQ5TA82 110 aaPredicted RBP2.33□□□□□ -2.04
TRIM38-201ENST00000357085 KRTAP4-5Q9BYR2 181 aa2.33□□□□□ -2.04
TRIM38-201ENST00000357085 MT1FP04733 61 aa2.32□□□□□ -2.04
TRIM38-201ENST00000357085 RYR2Q92736 4967 aa2.32□□□□□ -2.04
TRIM38-201ENST00000357085 KRTAP2-3P0C7H8 128 aa2.31□□□□□ -2.04
TRIM38-201ENST00000357085 KRTAP2-4Q9BYR9 128 aa2.31□□□□□ -2.04
TRIM38-201ENST00000357085 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
TRIM38-201ENST00000357085 HYDINQ4G0P3 5121 aa2.31□□□□□ -2.04
TRIM38-201ENST00000357085 KRTAP19-2Q3LHN2 52 aa2.31□□□□□ -2.04
TRIM38-201ENST00000357085 KRTAP10-7P60409 375 aaPredicted RBP2.3□□□□□ -2.04
TRIM38-201ENST00000357085 RYR3Q15413 4870 aa2.29□□□□□ -2.04
TRIM38-201ENST00000357085 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
TRIM38-201ENST00000357085 DNHD1Q96M86 4753 aa2.25□□□□□ -2.05
TRIM38-201ENST00000357085 BIRC6Q9NR09 4857 aa2.25□□□□□ -2.05
TRIM38-201ENST00000357085 KMT2CQ8NEZ4 4911 aaKnown RBP2.25□□□□□ -2.05
TRIM38-201ENST00000357085 MT1BP07438 61 aa2.25□□□□□ -2.05
TRIM38-201ENST00000357085 PCLOQ9Y6V0 5065 aa2.24□□□□□ -2.05
TRIM38-201ENST00000357085 LRP2P98164 4655 aa2.24□□□□□ -2.05
TRIM38-201ENST00000357085 CRCT1Q9UGL9 99 aa2.24□□□□□ -2.05
TRIM38-201ENST00000357085 MT1EP04732 61 aa2.22□□□□□ -2.05
TRIM38-201ENST00000357085 MT1LQ93083 61 aa2.21□□□□□ -2.05
TRIM38-201ENST00000357085 LCE2CQ5TA81 110 aa2.19□□□□□ -2.06
TRIM38-201ENST00000357085 KRTAP9-8Q9BYQ0 159 aa2.19□□□□□ -2.06
TRIM38-201ENST00000357085 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
TRIM38-201ENST00000357085 KRTAP9-3Q9BYQ3 159 aa2.17□□□□□ -2.06
TRIM38-201ENST00000357085 MT1GP13640 62 aa2.16□□□□□ -2.06
TRIM38-201ENST00000357085 KIAA1109Q2LD37 5005 aa2.14□□□□□ -2.07
TRIM38-201ENST00000357085 MT1AP04731 61 aa2.13□□□□□ -2.07
TRIM38-201ENST00000357085 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
TRIM38-201ENST00000357085 HERC1Q15751 4861 aa2.09□□□□□ -2.08
TRIM38-201ENST00000357085 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
TRIM38-201ENST00000357085 LPAP08519 4548 aa2.07□□□□□ -2.08
TRIM38-201ENST00000357085 KRTAP9-6A8MVA2 160 aa2.07□□□□□ -2.08
TRIM38-201ENST00000357085 LCE3BQ5TA77 95 aa2.07□□□□□ -2.08
TRIM38-201ENST00000357085 KRTAP19-3Q7Z4W3 81 aa2.05□□□□□ -2.08
TRIM38-201ENST00000357085 KRTAP4-7Q9BYR0 210 aa2.05□□□□□ -2.08
TRIM38-201ENST00000357085 KRTAP4-8A0A0G2JLE6 195 aa2.03□□□□□ -2.08
TRIM38-201ENST00000357085 KRTAP4-8Q9BYQ9 185 aa2.03□□□□□ -2.08
TRIM38-201ENST00000357085 ABCA13Q86UQ4 5058 aa2.03□□□□□ -2.09
TRIM38-201ENST00000357085 HERC2O95714 4834 aa2.02□□□□□ -2.09
TRIM38-201ENST00000357085 PRM1P04553 51 aa2.02□□□□□ -2.09
TRIM38-201ENST00000357085 SPRR2AP35326 72 aa2.02□□□□□ -2.09
TRIM38-201ENST00000357085 SPRR2FQ96RM1 72 aa2.01□□□□□ -2.09
TRIM38-201ENST00000357085 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms