RNA–Protein interactions for RNA: ENST00000356641.7

ARHGEF12-201, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5 BASIC

Gene ARHGEF12, Length 6,891 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-201ENST00000356641 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
ARHGEF12-201ENST00000356641 MT1HP80294 61 aa3.15□□□□□ -1.91
ARHGEF12-201ENST00000356641 FBN1P35555 2871 aaKnown RBP3.15□□□□□ -1.91
ARHGEF12-201ENST00000356641 BSNQ9UPA5 3926 aa3.13□□□□□ -1.91
ARHGEF12-201ENST00000356641 PLECQ15149 4684 aaKnown RBP3.13□□□□□ -1.91
ARHGEF12-201ENST00000356641 AKAP9Q99996 3911 aa3.13□□□□□ -1.91
ARHGEF12-201ENST00000356641 SVEP1Q4LDE5 3571 aa3.13□□□□□ -1.91
ARHGEF12-201ENST00000356641 MYCBP2O75592 4640 aa3.12□□□□□ -1.91
ARHGEF12-201ENST00000356641 CSMD1Q96PZ7 3565 aa3.12□□□□□ -1.91
ARHGEF12-201ENST00000356641 DYNC1H1Q14204 4646 aaKnown RBP3.12□□□□□ -1.91
ARHGEF12-201ENST00000356641 KRTAP4-1Q9BYQ7 146 aa3.11□□□□□ -1.91
ARHGEF12-201ENST00000356641 DNAH17Q9UFH2 4485 aa3.11□□□□□ -1.91
ARHGEF12-201ENST00000356641 DNAH8Q96JB1 4490 aa3.1□□□□□ -1.91
ARHGEF12-201ENST00000356641 RYR1P21817 5038 aa3.1□□□□□ -1.91
ARHGEF12-201ENST00000356641 VPS13CQ709C8 3753 aa3.1□□□□□ -1.91
ARHGEF12-201ENST00000356641 CSMD2Q7Z408 3487 aa3.1□□□□□ -1.91
ARHGEF12-201ENST00000356641 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
ARHGEF12-201ENST00000356641 CRCT1Q9UGL9 99 aa3.07□□□□□ -1.92
ARHGEF12-201ENST00000356641 HSPG2P98160 4391 aa3.06□□□□□ -1.92
ARHGEF12-201ENST00000356641 KRTAP19-8Q3LI54 63 aa3.06□□□□□ -1.92
ARHGEF12-201ENST00000356641 LRP1BQ9NZR2 4599 aa3.04□□□□□ -1.92
ARHGEF12-201ENST00000356641 SACSQ9NZJ4 4579 aa3.04□□□□□ -1.92
ARHGEF12-201ENST00000356641 MT1FP04733 61 aa3.03□□□□□ -1.92
ARHGEF12-201ENST00000356641 RYR2Q92736 4967 aa3.02□□□□□ -1.93
ARHGEF12-201ENST00000356641 DNAH9Q9NYC9 4486 aa3.01□□□□□ -1.93
ARHGEF12-201ENST00000356641 KRTAP10-5P60370 271 aa3□□□□□ -1.93
ARHGEF12-201ENST00000356641 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
ARHGEF12-201ENST00000356641 VPS13DQ5THJ4 4388 aa2.99□□□□□ -1.93
ARHGEF12-201ENST00000356641 CUBNO60494 3623 aa2.96□□□□□ -1.94
ARHGEF12-201ENST00000356641 KRTAP19-5Q3LI72 72 aa2.96□□□□□ -1.94
ARHGEF12-201ENST00000356641 DYNC2H1Q8NCM8 4307 aaKnown RBP2.94□□□□□ -1.94
ARHGEF12-201ENST00000356641 ANK2Q01484 3957 aa2.93□□□□□ -1.94
ARHGEF12-201ENST00000356641 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
ARHGEF12-201ENST00000356641 APOBP04114 4563 aaKnown RBP2.93□□□□□ -1.94
ARHGEF12-201ENST00000356641 KRTAP19-1Q8IUB9 90 aa2.92□□□□□ -1.94
ARHGEF12-201ENST00000356641 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
ARHGEF12-201ENST00000356641 KRTAP17-1Q9BYP8 105 aa2.91□□□□□ -1.94
ARHGEF12-201ENST00000356641 LRP1Q07954 4544 aaKnown RBP2.9□□□□□ -1.94
ARHGEF12-201ENST00000356641 RYR3Q15413 4870 aa2.9□□□□□ -1.95
ARHGEF12-201ENST00000356641 FAT1Q14517 4588 aa2.89□□□□□ -1.95
ARHGEF12-201ENST00000356641 BIRC6Q9NR09 4857 aa2.89□□□□□ -1.95
ARHGEF12-201ENST00000356641 ZNF469Q96JG9 3925 aaPredicted RBP2.89□□□□□ -1.95
ARHGEF12-201ENST00000356641 COL7A1Q02388 2944 aa2.88□□□□□ -1.95
ARHGEF12-201ENST00000356641 PCLOQ9Y6V0 5065 aa2.88□□□□□ -1.95
ARHGEF12-201ENST00000356641 DNHD1Q96M86 4753 aa2.86□□□□□ -1.95
ARHGEF12-201ENST00000356641 DNAH3Q8TD57 4116 aa2.85□□□□□ -1.95
ARHGEF12-201ENST00000356641 SPRR2FQ96RM1 72 aa2.84□□□□□ -1.95
ARHGEF12-201ENST00000356641 MT1XP80297 61 aa2.84□□□□□ -1.95
ARHGEF12-201ENST00000356641 MT1BP07438 61 aa2.83□□□□□ -1.96
ARHGEF12-201ENST00000356641 TRRAPQ9Y4A5 3859 aa2.82□□□□□ -1.96
ARHGEF12-201ENST00000356641 KIAA1109Q2LD37 5005 aa2.8□□□□□ -1.96
ARHGEF12-201ENST00000356641 CMYA5Q8N3K9 4069 aa2.79□□□□□ -1.96
ARHGEF12-201ENST00000356641 KMT2CQ8NEZ4 4911 aaKnown RBP2.79□□□□□ -1.96
ARHGEF12-201ENST00000356641 MT1GP13640 62 aa2.79□□□□□ -1.96
ARHGEF12-201ENST00000356641 KRTAP9-8Q9BYQ0 159 aa2.77□□□□□ -1.97
ARHGEF12-201ENST00000356641 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
ARHGEF12-201ENST00000356641 DNAH6Q9C0G6 4158 aa2.76□□□□□ -1.97
ARHGEF12-201ENST00000356641 FAT3Q8TDW7 4589 aa2.75□□□□□ -1.97
ARHGEF12-201ENST00000356641 KRTAP9-3Q9BYQ3 159 aa2.75□□□□□ -1.97
ARHGEF12-201ENST00000356641 LCE2CQ5TA81 110 aa2.74□□□□□ -1.97
ARHGEF12-201ENST00000356641 HERC2O95714 4834 aa2.74□□□□□ -1.97
ARHGEF12-201ENST00000356641 PRKDCP78527 4128 aaKnown RBP2.74□□□□□ -1.97
ARHGEF12-201ENST00000356641 LYSTQ99698 3801 aa2.72□□□□□ -1.97
ARHGEF12-201ENST00000356641 HECTD4Q9Y4D8 3996 aa2.69□□□□□ -1.98
ARHGEF12-201ENST00000356641 SPRR2EP22531 72 aa2.67□□□□□ -1.98
ARHGEF12-201ENST00000356641 SPRR2BP35325 72 aa2.67□□□□□ -1.98
ARHGEF12-201ENST00000356641 SPRR2AP35326 72 aa2.67□□□□□ -1.98
ARHGEF12-201ENST00000356641 CSMD3Q7Z407 3707 aa2.66□□□□□ -1.98
ARHGEF12-201ENST00000356641 MT1LQ93083 61 aa2.66□□□□□ -1.98
ARHGEF12-201ENST00000356641 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
ARHGEF12-201ENST00000356641 LRP2P98164 4655 aa2.65□□□□□ -1.98
ARHGEF12-201ENST00000356641 PKHD1L1Q86WI1 4243 aa2.65□□□□□ -1.99
ARHGEF12-201ENST00000356641 KRTAP19-2Q3LHN2 52 aa2.64□□□□□ -1.99
ARHGEF12-201ENST00000356641 LCE2BO14633 110 aa2.63□□□□□ -1.99
ARHGEF12-201ENST00000356641 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
ARHGEF12-201ENST00000356641 SPRR2DP22532 72 aa2.62□□□□□ -1.99
ARHGEF12-201ENST00000356641 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
ARHGEF12-201ENST00000356641 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
ARHGEF12-201ENST00000356641 PKD1P98161 4303 aa2.6□□□□□ -1.99
ARHGEF12-201ENST00000356641 MT1EP04732 61 aa2.59□□□□□ -1.99
ARHGEF12-201ENST00000356641 LCE3BQ5TA77 95 aa2.59□□□□□ -2
ARHGEF12-201ENST00000356641 DNAH7Q8WXX0 4024 aa2.58□□□□□ -2
ARHGEF12-201ENST00000356641 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
ARHGEF12-201ENST00000356641 ABCA13Q86UQ4 5058 aa2.55□□□□□ -2
ARHGEF12-201ENST00000356641 FRAS1Q86XX4 4008 aa2.54□□□□□ -2
ARHGEF12-201ENST00000356641 MUC17Q685J3 4493 aa2.53□□□□□ -2
ARHGEF12-201ENST00000356641 KRTAP4-8A0A0G2JLE6 195 aa2.53□□□□□ -2
ARHGEF12-201ENST00000356641 KRTAP4-8Q9BYQ9 185 aa2.53□□□□□ -2
ARHGEF12-201ENST00000356641 EPPK1P58107 5090 aaKnown RBP2.53□□□□□ -2
ARHGEF12-201ENST00000356641 MT1MQ8N339 61 aa2.5□□□□□ -2.01
ARHGEF12-201ENST00000356641 MT3P25713 68 aa2.5□□□□□ -2.01
ARHGEF12-201ENST00000356641 HYDINQ4G0P3 5121 aa2.49□□□□□ -2.01
ARHGEF12-201ENST00000356641 KRTAP9-6A0A140TA67 174 aa2.49□□□□□ -2.01
ARHGEF12-201ENST00000356641 LCE2DQ5TA82 110 aaPredicted RBP2.48□□□□□ -2.01
ARHGEF12-201ENST00000356641 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
ARHGEF12-201ENST00000356641 TNXBP22105 4242 aa2.47□□□□□ -2.01
ARHGEF12-201ENST00000356641 KRTAP9-2Q9BYQ4 174 aa2.46□□□□□ -2.02
ARHGEF12-201ENST00000356641 RNF213Q63HN8 5207 aa2.45□□□□□ -2.02
ARHGEF12-201ENST00000356641 KMT2AQ03164 3969 aa2.45□□□□□ -2.02
ARHGEF12-201ENST00000356641 VPS13BQ7Z7G8 4022 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms