RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 DNAH2Q9P225 4427 aa2.47□□□□□ -2.01
SRGAP1-201ENST00000355086 KRTAP8-1Q8IUC2 63 aa2.47□□□□□ -2.01
SRGAP1-201ENST00000355086 ALMS1Q8TCU4 4167 aa2.45□□□□□ -2.02
SRGAP1-201ENST00000355086 DNAH1Q9P2D7 4330 aa2.45□□□□□ -2.02
SRGAP1-201ENST00000355086 LORP23490 312 aaPredicted RBP2.43□□□□□ -2.02
SRGAP1-201ENST00000355086 KRTAP4-5Q9BYR2 181 aa2.4□□□□□ -2.02
SRGAP1-201ENST00000355086 LYSTQ99698 3801 aa2.38□□□□□ -2.03
SRGAP1-201ENST00000355086 ZNF469Q96JG9 3925 aaPredicted RBP2.35□□□□□ -2.03
SRGAP1-201ENST00000355086 DNAH10Q8IVF4 4471 aa2.34□□□□□ -2.03
SRGAP1-201ENST00000355086 VPS13BQ7Z7G8 4022 aa2.34□□□□□ -2.04
SRGAP1-201ENST00000355086 DNAH17Q9UFH2 4485 aa2.33□□□□□ -2.04
SRGAP1-201ENST00000355086 ANK2Q01484 3957 aa2.33□□□□□ -2.04
SRGAP1-201ENST00000355086 DNAH5Q8TE73 4624 aa2.32□□□□□ -2.04
SRGAP1-201ENST00000355086 DNAH9Q9NYC9 4486 aa2.31□□□□□ -2.04
SRGAP1-201ENST00000355086 KRTAP10-7P60409 375 aaPredicted RBP2.31□□□□□ -2.04
SRGAP1-201ENST00000355086 DNAH11Q96DT5 4516 aa2.31□□□□□ -2.04
SRGAP1-201ENST00000355086 KRTAP10-4P60372 401 aaPredicted RBP2.31□□□□□ -2.04
SRGAP1-201ENST00000355086 FRAS1Q86XX4 4008 aa2.31□□□□□ -2.04
SRGAP1-201ENST00000355086 DNAH8Q96JB1 4490 aa2.3□□□□□ -2.04
SRGAP1-201ENST00000355086 DNAH3Q8TD57 4116 aa2.3□□□□□ -2.04
SRGAP1-201ENST00000355086 DNAH7Q8WXX0 4024 aa2.29□□□□□ -2.04
SRGAP1-201ENST00000355086 KMT2AQ03164 3969 aa2.28□□□□□ -2.04
SRGAP1-201ENST00000355086 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.04
SRGAP1-201ENST00000355086 CMYA5Q8N3K9 4069 aa2.25□□□□□ -2.05
SRGAP1-201ENST00000355086 FAT2Q9NYQ8 4349 aa2.23□□□□□ -2.05
SRGAP1-201ENST00000355086 PLECQ15149 4684 aaKnown RBP2.23□□□□□ -2.05
SRGAP1-201ENST00000355086 MT1HP80294 61 aa2.22□□□□□ -2.05
SRGAP1-201ENST00000355086 FAT1Q14517 4588 aa2.22□□□□□ -2.05
SRGAP1-201ENST00000355086 KRTAP19-5Q3LI72 72 aa2.22□□□□□ -2.05
SRGAP1-201ENST00000355086 LRP1BQ9NZR2 4599 aa2.21□□□□□ -2.06
SRGAP1-201ENST00000355086 LCE3CQ5T5A8 94 aa2.2□□□□□ -2.06
SRGAP1-201ENST00000355086 HECTD4Q9Y4D8 3996 aa2.2□□□□□ -2.06
SRGAP1-201ENST00000355086 SPRR2GQ9BYE4 73 aa2.19□□□□□ -2.06
SRGAP1-201ENST00000355086 DNAH6Q9C0G6 4158 aa2.19□□□□□ -2.06
SRGAP1-201ENST00000355086 MT2AP02795 61 aa2.18□□□□□ -2.06
SRGAP1-201ENST00000355086 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
SRGAP1-201ENST00000355086 KRTAP4-1Q9BYQ7 146 aa2.17□□□□□ -2.06
SRGAP1-201ENST00000355086 SPRR2EP22531 72 aa2.16□□□□□ -2.06
SRGAP1-201ENST00000355086 SPRR2BP35325 72 aa2.16□□□□□ -2.06
SRGAP1-201ENST00000355086 SPRR2AP35326 72 aa2.16□□□□□ -2.06
SRGAP1-201ENST00000355086 VPS13DQ5THJ4 4388 aa2.15□□□□□ -2.07
SRGAP1-201ENST00000355086 LCE3BQ5TA77 95 aa2.14□□□□□ -2.07
SRGAP1-201ENST00000355086 MT1FP04733 61 aa2.13□□□□□ -2.07
SRGAP1-201ENST00000355086 SACSQ9NZJ4 4579 aa2.13□□□□□ -2.07
SRGAP1-201ENST00000355086 KRTAP19-4Q3LI73 84 aa2.12□□□□□ -2.07
SRGAP1-201ENST00000355086 DYNC2H1Q8NCM8 4307 aaKnown RBP2.11□□□□□ -2.07
SRGAP1-201ENST00000355086 PRKDCP78527 4128 aaKnown RBP2.09□□□□□ -2.07
SRGAP1-201ENST00000355086 KRTAP12-4P60329 112 aa2.09□□□□□ -2.07
SRGAP1-201ENST00000355086 LCE2BO14633 110 aa2.09□□□□□ -2.08
SRGAP1-201ENST00000355086 SPRR2DP22532 72 aa2.08□□□□□ -2.08
SRGAP1-201ENST00000355086 LRP1Q07954 4544 aaKnown RBP2.07□□□□□ -2.08
SRGAP1-201ENST00000355086 STARD9Q9P2P6 4700 aa2.07□□□□□ -2.08
SRGAP1-201ENST00000355086 MYCBP2O75592 4640 aa2.06□□□□□ -2.08
SRGAP1-201ENST00000355086 DYNC1H1Q14204 4646 aaKnown RBP2.06□□□□□ -2.08
SRGAP1-201ENST00000355086 MT1GP13640 62 aa2.05□□□□□ -2.08
SRGAP1-201ENST00000355086 FAT3Q8TDW7 4589 aa2.05□□□□□ -2.08
SRGAP1-201ENST00000355086 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
SRGAP1-201ENST00000355086 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
SRGAP1-201ENST00000355086 PKHD1P08F94 4074 aa2□□□□□ -2.09
SRGAP1-201ENST00000355086 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
SRGAP1-201ENST00000355086 PKHD1L1Q86WI1 4243 aa1.99□□□□□ -2.09
SRGAP1-201ENST00000355086 PKD1P98161 4303 aa1.99□□□□□ -2.09
SRGAP1-201ENST00000355086 KRTAP19-8Q3LI54 63 aa1.97□□□□□ -2.09
SRGAP1-201ENST00000355086 LCE2CQ5TA81 110 aa1.97□□□□□ -2.09
SRGAP1-201ENST00000355086 MT1XP80297 61 aa1.96□□□□□ -2.1
SRGAP1-201ENST00000355086 LCE3EQ5T5B0 92 aa1.96□□□□□ -2.1
SRGAP1-201ENST00000355086 KRTAP19-1Q8IUB9 90 aa1.94□□□□□ -2.1
SRGAP1-201ENST00000355086 LCE2DQ5TA82 110 aaPredicted RBP1.93□□□□□ -2.1
SRGAP1-201ENST00000355086 DNHD1Q96M86 4753 aa1.92□□□□□ -2.1
SRGAP1-201ENST00000355086 KRTAP4-8A0A0G2JLE6 195 aa1.91□□□□□ -2.1
SRGAP1-201ENST00000355086 KRTAP4-8Q9BYQ9 185 aa1.91□□□□□ -2.1
SRGAP1-201ENST00000355086 MT3P25713 68 aa1.88□□□□□ -2.11
SRGAP1-201ENST00000355086 HSPG2P98160 4391 aa1.88□□□□□ -2.11
SRGAP1-201ENST00000355086 MT4P47944 62 aa1.88□□□□□ -2.11
SRGAP1-201ENST00000355086 KRTAP19-3Q7Z4W3 81 aa1.88□□□□□ -2.11
SRGAP1-201ENST00000355086 MT1BP07438 61 aa1.87□□□□□ -2.11
SRGAP1-201ENST00000355086 KRTAP9-8Q9BYQ0 159 aa1.86□□□□□ -2.11
SRGAP1-201ENST00000355086 RYR1P21817 5038 aa1.85□□□□□ -2.11
SRGAP1-201ENST00000355086 LPAP08519 4548 aa1.84□□□□□ -2.11
SRGAP1-201ENST00000355086 TNXBP22105 4242 aa1.84□□□□□ -2.11
SRGAP1-201ENST00000355086 MT1LQ93083 61 aa1.84□□□□□ -2.11
SRGAP1-201ENST00000355086 PRM1P04553 51 aa1.84□□□□□ -2.12
SRGAP1-201ENST00000355086 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.12
SRGAP1-201ENST00000355086 KRTAP9-3Q9BYQ3 159 aa1.83□□□□□ -2.12
SRGAP1-201ENST00000355086 LCE1DQ5T752 114 aa1.82□□□□□ -2.12
SRGAP1-201ENST00000355086 KRTAP4-7Q9BYR0 210 aa1.8□□□□□ -2.12
SRGAP1-201ENST00000355086 LRP2P98164 4655 aa1.79□□□□□ -2.12
SRGAP1-201ENST00000355086 MT1EP04732 61 aa1.79□□□□□ -2.12
SRGAP1-201ENST00000355086 RYR3Q15413 4870 aa1.78□□□□□ -2.12
SRGAP1-201ENST00000355086 KRTAP17-1Q9BYP8 105 aa1.78□□□□□ -2.13
SRGAP1-201ENST00000355086 MUC17Q685J3 4493 aa1.75□□□□□ -2.13
SRGAP1-201ENST00000355086 LCE5AQ5TCM9 118 aa1.75□□□□□ -2.13
SRGAP1-201ENST00000355086 MT1MQ8N339 61 aa1.74□□□□□ -2.13
SRGAP1-201ENST00000355086 LOC100996750A0A140TA64 210 aa1.74□□□□□ -2.13
SRGAP1-201ENST00000355086 KRTAP9-2Q9BYQ4 174 aa1.7□□□□□ -2.14
SRGAP1-201ENST00000355086 KRTAP4-3Q9BYR4 195 aa1.69□□□□□ -2.14
SRGAP1-201ENST00000355086 HERC2O95714 4834 aa1.69□□□□□ -2.14
SRGAP1-201ENST00000355086 KMT2CQ8NEZ4 4911 aaKnown RBP1.67□□□□□ -2.14
SRGAP1-201ENST00000355086 KRTAP19-6Q3LI70 58 aa1.66□□□□□ -2.14
SRGAP1-201ENST00000355086 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms