RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 DEFB116Q30KQ4 102 aa0.95□□□□□ -2.26
SMARCAD1-201ENST00000354268 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
SMARCAD1-201ENST00000354268 HIGD1CA8MV81 97 aa0.94□□□□□ -2.26
SMARCAD1-201ENST00000354268 PRM2P04554 102 aa0.94□□□□□ -2.26
SMARCAD1-201ENST00000354268 IGLC3P0DOY3 106 aa0.94□□□□□ -2.26
SMARCAD1-201ENST00000354268 CSMD1Q96PZ7 3565 aa0.94□□□□□ -2.26
SMARCAD1-201ENST00000354268 FXYD2P54710 66 aa0.94□□□□□ -2.26
SMARCAD1-201ENST00000354268 D6R8Y8 96 aa0.94□□□□□ -2.26
SMARCAD1-201ENST00000354268 Q1T7F1 81 aa0.94□□□□□ -2.26
SMARCAD1-201ENST00000354268 CUBNO60494 3623 aa0.94□□□□□ -2.26
SMARCAD1-201ENST00000354268 TEP1Q99973 2627 aaKnown RBP0.93□□□□□ -2.26
SMARCAD1-201ENST00000354268 KRTAP9-6A8MVA2 160 aa0.93□□□□□ -2.26
SMARCAD1-201ENST00000354268 STAB1Q9NY15 2570 aa0.93□□□□□ -2.26
SMARCAD1-201ENST00000354268 ZNF292O60281 2723 aa0.93□□□□□ -2.26
SMARCAD1-201ENST00000354268 FAT4Q6V0I7 4981 aa0.93□□□□□ -2.26
SMARCAD1-201ENST00000354268 COX7CP15954 63 aa0.93□□□□□ -2.26
SMARCAD1-201ENST00000354268 TTTY13Q9BZ97 58 aa0.93□□□□□ -2.26
SMARCAD1-201ENST00000354268 WDFY4Q6ZS81 3184 aa0.93□□□□□ -2.26
SMARCAD1-201ENST00000354268 COL6A5A8TX70 2615 aa0.93□□□□□ -2.26
SMARCAD1-201ENST00000354268 KRTAP12-2P59991 146 aa0.92□□□□□ -2.26
SMARCAD1-201ENST00000354268 ANKRD11Q6UB99 2663 aaPredicted RBP0.92□□□□□ -2.26
SMARCAD1-201ENST00000354268 MDN1Q9NU22 5596 aa0.92□□□□□ -2.26
SMARCAD1-201ENST00000354268 ANK3Q12955 4377 aaKnown RBP0.92□□□□□ -2.26
SMARCAD1-201ENST00000354268 CNFNQ9BYD5 112 aa0.92□□□□□ -2.26
SMARCAD1-201ENST00000354268 KRTAP19-6Q3LI70 58 aa0.92□□□□□ -2.26
SMARCAD1-201ENST00000354268 ETDBQ3ZM63 59 aa0.92□□□□□ -2.26
SMARCAD1-201ENST00000354268 KIAA1109Q2LD37 5005 aa0.92□□□□□ -2.26
SMARCAD1-201ENST00000354268 MYO15AQ9UKN7 3530 aa0.92□□□□□ -2.26
SMARCAD1-201ENST00000354268 HEATR1Q9H583 2144 aaKnown RBP0.91□□□□□ -2.26
SMARCAD1-201ENST00000354268 LOC400499M0QZD8 3231 aa0.91□□□□□ -2.26
SMARCAD1-201ENST00000354268 APOBP04114 4563 aaKnown RBP0.91□□□□□ -2.26
SMARCAD1-201ENST00000354268 LINC00308Q8TCZ7 52 aa0.91□□□□□ -2.26
SMARCAD1-201ENST00000354268 DNAH2Q9P225 4427 aa0.91□□□□□ -2.26
SMARCAD1-201ENST00000354268 COA5Q86WW8 74 aa0.91□□□□□ -2.26
SMARCAD1-201ENST00000354268 LINC00472Q9H8W2 130 aa0.91□□□□□ -2.26
SMARCAD1-201ENST00000354268 SPRR1AP35321 89 aa0.9□□□□□ -2.26
SMARCAD1-201ENST00000354268 LINC00208Q96KT6 92 aa0.9□□□□□ -2.26
SMARCAD1-201ENST00000354268 DNAH17Q9UFH2 4485 aa0.9□□□□□ -2.27
SMARCAD1-201ENST00000354268 HERC2O95714 4834 aa0.9□□□□□ -2.27
SMARCAD1-201ENST00000354268 UBR5O95071 2799 aaPredicted RBP0.9□□□□□ -2.27
SMARCAD1-201ENST00000354268 LCE3DQ9BYE3 92 aa0.9□□□□□ -2.27
SMARCAD1-201ENST00000354268 RPS10P5Q9NQ39 176 aa0.9□□□□□ -2.27
SMARCAD1-201ENST00000354268 UQCR11O14957 56 aa0.9□□□□□ -2.27
SMARCAD1-201ENST00000354268 PRO1854Q9UHT4 67 aa0.9□□□□□ -2.27
SMARCAD1-201ENST00000354268 K7ERJ3 54 aa0.89□□□□□ -2.27
SMARCAD1-201ENST00000354268 WFDC2Q14508 124 aa0.89□□□□□ -2.27
SMARCAD1-201ENST00000354268 MT1FP04733 61 aa0.89□□□□□ -2.27
SMARCAD1-201ENST00000354268 STAB2Q8WWQ8 2551 aa0.89□□□□□ -2.27
SMARCAD1-201ENST00000354268 A0A0D9SG42 100 aa0.88□□□□□ -2.27
SMARCAD1-201ENST00000354268 MT3P25713 68 aa0.88□□□□□ -2.27
SMARCAD1-201ENST00000354268 GCN1Q92616 2671 aaKnown RBP0.88□□□□□ -2.27
SMARCAD1-201ENST00000354268 FRYQ5TBA9 3013 aa0.88□□□□□ -2.27
SMARCAD1-201ENST00000354268 KALRNO60229 2985 aa0.88□□□□□ -2.27
SMARCAD1-201ENST00000354268 MT1HP80294 61 aa0.88□□□□□ -2.27
SMARCAD1-201ENST00000354268 DNAH5Q8TE73 4624 aa0.87□□□□□ -2.27
SMARCAD1-201ENST00000354268 HSD52Q0P140 79 aa0.87□□□□□ -2.27
SMARCAD1-201ENST00000354268 RPL39LQ96EH5 51 aaKnown RBP0.87□□□□□ -2.27
SMARCAD1-201ENST00000354268 NBEAQ8NFP9 2946 aa0.87□□□□□ -2.27
SMARCAD1-201ENST00000354268 TENM4Q6N022 2769 aa0.87□□□□□ -2.27
SMARCAD1-201ENST00000354268 CYP4F30PQ9H0H9 118 aa0.87□□□□□ -2.27
SMARCAD1-201ENST00000354268 H3BUT2 72 aa0.87□□□□□ -2.27
SMARCAD1-201ENST00000354268 MT1GP13640 62 aa0.86□□□□□ -2.27
SMARCAD1-201ENST00000354268 SPRR2GQ9BYE4 73 aa0.86□□□□□ -2.27
SMARCAD1-201ENST00000354268 USP9YO00507 2555 aaPredicted RBP0.86□□□□□ -2.27
SMARCAD1-201ENST00000354268 IGSF10Q6WRI0 2623 aa0.86□□□□□ -2.27
SMARCAD1-201ENST00000354268 DNAH9Q9NYC9 4486 aa0.86□□□□□ -2.27
SMARCAD1-201ENST00000354268 FREM2Q5SZK8 3169 aa0.86□□□□□ -2.27
SMARCAD1-201ENST00000354268 ZZEF1O43149 2961 aa0.86□□□□□ -2.27
SMARCAD1-201ENST00000354268 CEP295Q9C0D2 2601 aa0.85□□□□□ -2.27
SMARCAD1-201ENST00000354268 MT4P47944 62 aa0.85□□□□□ -2.27
SMARCAD1-201ENST00000354268 VPS13AQ96RL7 3174 aa0.85□□□□□ -2.27
SMARCAD1-201ENST00000354268 DMXL1Q9Y485 3027 aa0.84□□□□□ -2.27
SMARCAD1-201ENST00000354268 LINC00643Q86TS7 51 aa0.84□□□□□ -2.27
SMARCAD1-201ENST00000354268 KRTAP4-3Q9BYR4 195 aa0.84□□□□□ -2.27
SMARCAD1-201ENST00000354268 SMIM11BQ8TCY0 68 aa0.84□□□□□ -2.28
SMARCAD1-201ENST00000354268 FAT1Q14517 4588 aa0.84□□□□□ -2.28
SMARCAD1-201ENST00000354268 MACF1Q9UPN3 7388 aaKnown RBP0.84□□□□□ -2.28
SMARCAD1-201ENST00000354268 SNRNP200O75643 2136 aaKnown RBP0.83□□□□□ -2.28
SMARCAD1-201ENST00000354268 NF1P21359 2839 aa0.83□□□□□ -2.28
SMARCAD1-201ENST00000354268 ABCA13Q86UQ4 5058 aa0.83□□□□□ -2.28
SMARCAD1-201ENST00000354268 ZANQ9Y493 2812 aa0.82□□□□□ -2.28
SMARCAD1-201ENST00000354268 RPL39P62891 51 aaKnown RBP0.82□□□□□ -2.28
SMARCAD1-201ENST00000354268 LCE1CQ5T751 118 aa0.82□□□□□ -2.28
SMARCAD1-201ENST00000354268 FLNAP21333 2647 aaKnown RBP0.82□□□□□ -2.28
SMARCAD1-201ENST00000354268 FSIP2Q5CZC0 6907 aa0.82□□□□□ -2.28
SMARCAD1-201ENST00000354268 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
SMARCAD1-201ENST00000354268 STARD9Q9P2P6 4700 aa0.82□□□□□ -2.28
SMARCAD1-201ENST00000354268 HMCN2Q8NDA2 5059 aa0.82□□□□□ -2.28
SMARCAD1-201ENST00000354268 TENM1Q9UKZ4 2725 aa0.81□□□□□ -2.28
SMARCAD1-201ENST00000354268 KRTAP5-7Q6L8G8 165 aa0.81□□□□□ -2.28
SMARCAD1-201ENST00000354268 KMT2DO14686 5537 aa0.81□□□□□ -2.28
SMARCAD1-201ENST00000354268 TENM3Q9P273 2699 aa0.8□□□□□ -2.28
SMARCAD1-201ENST00000354268 TRIOO75962 3097 aa0.8□□□□□ -2.28
SMARCAD1-201ENST00000354268 NIPBLQ6KC79 2804 aaeCLIP0.8□□□□□ -2.28
SMARCAD1-201ENST00000354268 MIR22HGQ0VDD5 57 aa0.8□□□□□ -2.28
SMARCAD1-201ENST00000354268 KRTAP13-4Q3LI77 160 aa0.8□□□□□ -2.28
SMARCAD1-201ENST00000354268 CRYBG3Q68DQ2 2970 aa0.8□□□□□ -2.28
SMARCAD1-201ENST00000354268 PRRC2CQ9Y520 2896 aaKnown RBP0.8□□□□□ -2.28
SMARCAD1-201ENST00000354268 TEX15Q9BXT5 2789 aa0.8□□□□□ -2.28
SMARCAD1-201ENST00000354268 MT1BP07438 61 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms