RNA–Protein interactions for RNA: ENST00000338932.7

SPTBN4-201, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPTBN4, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-201ENST00000338932 LCE3AQ5TA76 89 aa8.42□□□□□ -1.06
SPTBN4-201ENST00000338932 MT1HL1P0DM35 61 aa8.4□□□□□ -1.06
SPTBN4-201ENST00000338932 HECTD4Q9Y4D8 3996 aa8.33□□□□□ -1.08
SPTBN4-201ENST00000338932 ZNF469Q96JG9 3925 aaPredicted RBP8.32□□□□□ -1.08
SPTBN4-201ENST00000338932 CRCT1Q9UGL9 99 aa8.28□□□□□ -1.08
SPTBN4-201ENST00000338932 DNAH1Q9P2D7 4330 aa8.22□□□□□ -1.09
SPTBN4-201ENST00000338932 KRTAP10-5P60370 271 aa8.2□□□□□ -1.1
SPTBN4-201ENST00000338932 DNAH2Q9P225 4427 aa8.15□□□□□ -1.1
SPTBN4-201ENST00000338932 KRTAP10-4P60372 401 aaPredicted RBP8.14□□□□□ -1.11
SPTBN4-201ENST00000338932 ANK2Q01484 3957 aa8.13□□□□□ -1.11
SPTBN4-201ENST00000338932 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
SPTBN4-201ENST00000338932 KRTAP8-1Q8IUC2 63 aa8.12□□□□□ -1.11
SPTBN4-201ENST00000338932 VPS13BQ7Z7G8 4022 aa8.08□□□□□ -1.12
SPTBN4-201ENST00000338932 KMT2AQ03164 3969 aa8.05□□□□□ -1.12
SPTBN4-201ENST00000338932 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
SPTBN4-201ENST00000338932 ANK3Q12955 4377 aaKnown RBP7.98□□□□□ -1.13
SPTBN4-201ENST00000338932 SPRR2GQ9BYE4 73 aa7.92□□□□□ -1.14
SPTBN4-201ENST00000338932 FRAS1Q86XX4 4008 aa7.84□□□□□ -1.15
SPTBN4-201ENST00000338932 LCE3CQ5T5A8 94 aa7.79□□□□□ -1.16
SPTBN4-201ENST00000338932 KRTAP10-7P60409 375 aaPredicted RBP7.78□□□□□ -1.16
SPTBN4-201ENST00000338932 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
SPTBN4-201ENST00000338932 FLGP20930 4061 aaPredicted RBP7.68□□□□□ -1.18
SPTBN4-201ENST00000338932 PRKDCP78527 4128 aaKnown RBP7.66□□□□□ -1.18
SPTBN4-201ENST00000338932 KRTAP19-5Q3LI72 72 aa7.46□□□□□ -1.22
SPTBN4-201ENST00000338932 MT1HP80294 61 aa7.4□□□□□ -1.22
SPTBN4-201ENST00000338932 DNAH10Q8IVF4 4471 aa7.38□□□□□ -1.23
SPTBN4-201ENST00000338932 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
SPTBN4-201ENST00000338932 FAT2Q9NYQ8 4349 aa7.34□□□□□ -1.23
SPTBN4-201ENST00000338932 MT2AP02795 61 aa7.3□□□□□ -1.24
SPTBN4-201ENST00000338932 DYNC2H1Q8NCM8 4307 aaKnown RBP7.27□□□□□ -1.25
SPTBN4-201ENST00000338932 SPRR2FQ96RM1 72 aa7.26□□□□□ -1.25
SPTBN4-201ENST00000338932 VPS13DQ5THJ4 4388 aa7.23□□□□□ -1.25
SPTBN4-201ENST00000338932 SPRR5A0A1B0GTR4 108 aa7.2□□□□□ -1.26
SPTBN4-201ENST00000338932 DNAH9Q9NYC9 4486 aa7.15□□□□□ -1.26
SPTBN4-201ENST00000338932 DNAH11Q96DT5 4516 aa7.12□□□□□ -1.27
SPTBN4-201ENST00000338932 KRTAP12-4P60329 112 aa7.11□□□□□ -1.27
SPTBN4-201ENST00000338932 KRTAP19-8Q3LI54 63 aa7.11□□□□□ -1.27
SPTBN4-201ENST00000338932 PKHD1P08F94 4074 aa7.07□□□□□ -1.28
SPTBN4-201ENST00000338932 DNAH8Q96JB1 4490 aa7.06□□□□□ -1.28
SPTBN4-201ENST00000338932 KRTAP4-1Q9BYQ7 146 aa7.06□□□□□ -1.28
SPTBN4-201ENST00000338932 MT1FP04733 61 aa7.04□□□□□ -1.28
SPTBN4-201ENST00000338932 MT3P25713 68 aa6.97□□□□□ -1.29
SPTBN4-201ENST00000338932 DNAH17Q9UFH2 4485 aa6.94□□□□□ -1.3
SPTBN4-201ENST00000338932 LCE3BQ5TA77 95 aa6.93□□□□□ -1.3
SPTBN4-201ENST00000338932 PKHD1L1Q86WI1 4243 aa6.9□□□□□ -1.3
SPTBN4-201ENST00000338932 LCE3DQ9BYE3 92 aa6.9□□□□□ -1.31
SPTBN4-201ENST00000338932 MT1GP13640 62 aa6.84□□□□□ -1.31
SPTBN4-201ENST00000338932 LCE3EQ5T5B0 92 aa6.82□□□□□ -1.32
SPTBN4-201ENST00000338932 LCE2BO14633 110 aa6.81□□□□□ -1.32
SPTBN4-201ENST00000338932 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
SPTBN4-201ENST00000338932 MT1XP80297 61 aa6.78□□□□□ -1.32
SPTBN4-201ENST00000338932 SPRR2EP22531 72 aa6.78□□□□□ -1.32
SPTBN4-201ENST00000338932 SPRR2BP35325 72 aa6.78□□□□□ -1.32
SPTBN4-201ENST00000338932 SPRR2AP35326 72 aa6.78□□□□□ -1.32
SPTBN4-201ENST00000338932 STARD9Q9P2P6 4700 aa6.76□□□□□ -1.33
SPTBN4-201ENST00000338932 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
SPTBN4-201ENST00000338932 MT1LQ93083 61 aa6.66□□□□□ -1.34
SPTBN4-201ENST00000338932 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
SPTBN4-201ENST00000338932 SPRR2DP22532 72 aa6.64□□□□□ -1.35
SPTBN4-201ENST00000338932 PLECQ15149 4684 aaKnown RBP6.62□□□□□ -1.35
SPTBN4-201ENST00000338932 HSPG2P98160 4391 aa6.46□□□□□ -1.38
SPTBN4-201ENST00000338932 DYNC1H1Q14204 4646 aaKnown RBP6.43□□□□□ -1.38
SPTBN4-201ENST00000338932 PKD1P98161 4303 aa6.43□□□□□ -1.38
SPTBN4-201ENST00000338932 KRTAP19-3Q7Z4W3 81 aa6.42□□□□□ -1.38
SPTBN4-201ENST00000338932 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
SPTBN4-201ENST00000338932 MT1BP07438 61 aa6.4□□□□□ -1.38
SPTBN4-201ENST00000338932 LRP1BQ9NZR2 4599 aa6.37□□□□□ -1.39
SPTBN4-201ENST00000338932 MT1EP04732 61 aa6.36□□□□□ -1.39
SPTBN4-201ENST00000338932 KRTAP9-8Q9BYQ0 159 aa6.36□□□□□ -1.39
SPTBN4-201ENST00000338932 TNXBP22105 4242 aa6.33□□□□□ -1.4
SPTBN4-201ENST00000338932 SACSQ9NZJ4 4579 aa6.3□□□□□ -1.4
SPTBN4-201ENST00000338932 LCE2CQ5TA81 110 aa6.26□□□□□ -1.41
SPTBN4-201ENST00000338932 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
SPTBN4-201ENST00000338932 PRM1P04553 51 aa6.19□□□□□ -1.42
SPTBN4-201ENST00000338932 FAT1Q14517 4588 aa6.12□□□□□ -1.43
SPTBN4-201ENST00000338932 MT1MQ8N339 61 aa6.07□□□□□ -1.44
SPTBN4-201ENST00000338932 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
SPTBN4-201ENST00000338932 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
SPTBN4-201ENST00000338932 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
SPTBN4-201ENST00000338932 MT1AP04731 61 aa5.96□□□□□ -1.46
SPTBN4-201ENST00000338932 FAT3Q8TDW7 4589 aa5.92□□□□□ -1.46
SPTBN4-201ENST00000338932 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
SPTBN4-201ENST00000338932 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
SPTBN4-201ENST00000338932 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
SPTBN4-201ENST00000338932 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
SPTBN4-201ENST00000338932 MYCBP2O75592 4640 aa5.79□□□□□ -1.48
SPTBN4-201ENST00000338932 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
SPTBN4-201ENST00000338932 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
SPTBN4-201ENST00000338932 LCE1BQ5T7P3 118 aa5.62□□□□□ -1.51
SPTBN4-201ENST00000338932 MT4P47944 62 aa5.61□□□□□ -1.51
SPTBN4-201ENST00000338932 KRTAP19-2Q3LHN2 52 aa5.55□□□□□ -1.52
SPTBN4-201ENST00000338932 MUC17Q685J3 4493 aa5.53□□□□□ -1.52
SPTBN4-201ENST00000338932 RYR1P21817 5038 aa5.51□□□□□ -1.53
SPTBN4-201ENST00000338932 DNHD1Q96M86 4753 aa5.51□□□□□ -1.53
SPTBN4-201ENST00000338932 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
SPTBN4-201ENST00000338932 LOC100996750A0A140TA64 210 aa5.46□□□□□ -1.54
SPTBN4-201ENST00000338932 KRTAP19-7Q3SYF9 63 aa5.44□□□□□ -1.54
SPTBN4-201ENST00000338932 LRP2P98164 4655 aa5.42□□□□□ -1.54
SPTBN4-201ENST00000338932 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
SPTBN4-201ENST00000338932 RYR3Q15413 4870 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms