RNA–Protein interactions for RNA: ENST00000338502.8

SPRED3-201, Transcript of sprouty related EVH1 domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED3, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-201ENST00000338502 INE1O15225 51 aa7.73□□□□□ -1.17
SPRED3-201ENST00000338502 LORP23490 312 aaPredicted RBP7.71□□□□□ -1.18
SPRED3-201ENST00000338502 KRTAP12-3P60328 96 aa7.7□□□□□ -1.18
SPRED3-201ENST00000338502 DNAH9Q9NYC9 4486 aa7.68□□□□□ -1.18
SPRED3-201ENST00000338502 ANK2Q01484 3957 aa7.66□□□□□ -1.18
SPRED3-201ENST00000338502 PLECQ15149 4684 aaKnown RBP7.63□□□□□ -1.19
SPRED3-201ENST00000338502 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
SPRED3-201ENST00000338502 ALMS1Q8TCU4 4167 aa7.58□□□□□ -1.2
SPRED3-201ENST00000338502 DNAH11Q96DT5 4516 aa7.58□□□□□ -1.2
SPRED3-201ENST00000338502 LYSTQ99698 3801 aa7.54□□□□□ -1.2
SPRED3-201ENST00000338502 DNAH1Q9P2D7 4330 aa7.53□□□□□ -1.2
SPRED3-201ENST00000338502 DNHD1Q96M86 4753 aa7.49□□□□□ -1.21
SPRED3-201ENST00000338502 FAT1Q14517 4588 aa7.43□□□□□ -1.22
SPRED3-201ENST00000338502 CRCT1Q9UGL9 99 aa7.41□□□□□ -1.22
SPRED3-201ENST00000338502 KRTAP4-1Q9BYQ7 146 aa7.4□□□□□ -1.23
SPRED3-201ENST00000338502 VPS13DQ5THJ4 4388 aa7.38□□□□□ -1.23
SPRED3-201ENST00000338502 DNAH17Q9UFH2 4485 aa7.37□□□□□ -1.23
SPRED3-201ENST00000338502 FRAS1Q86XX4 4008 aa7.35□□□□□ -1.23
SPRED3-201ENST00000338502 DYNC1H1Q14204 4646 aaKnown RBP7.34□□□□□ -1.23
SPRED3-201ENST00000338502 DNAH8Q96JB1 4490 aa7.32□□□□□ -1.24
SPRED3-201ENST00000338502 DNAH7Q8WXX0 4024 aa7.28□□□□□ -1.24
SPRED3-201ENST00000338502 LRP1BQ9NZR2 4599 aa7.26□□□□□ -1.25
SPRED3-201ENST00000338502 CMYA5Q8N3K9 4069 aa7.25□□□□□ -1.25
SPRED3-201ENST00000338502 DNAH2Q9P225 4427 aa7.24□□□□□ -1.25
SPRED3-201ENST00000338502 RYR1P21817 5038 aa7.24□□□□□ -1.25
SPRED3-201ENST00000338502 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
SPRED3-201ENST00000338502 MT1HP80294 61 aa7.19□□□□□ -1.26
SPRED3-201ENST00000338502 STARD9Q9P2P6 4700 aa7.19□□□□□ -1.26
SPRED3-201ENST00000338502 SACSQ9NZJ4 4579 aa7.18□□□□□ -1.26
SPRED3-201ENST00000338502 DNAH3Q8TD57 4116 aa7.17□□□□□ -1.26
SPRED3-201ENST00000338502 KMT2AQ03164 3969 aa7.17□□□□□ -1.26
SPRED3-201ENST00000338502 MT2AP02795 61 aa7.17□□□□□ -1.26
SPRED3-201ENST00000338502 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
SPRED3-201ENST00000338502 HECTD4Q9Y4D8 3996 aa7.07□□□□□ -1.28
SPRED3-201ENST00000338502 DYNC2H1Q8NCM8 4307 aaKnown RBP7.05□□□□□ -1.28
SPRED3-201ENST00000338502 DNAH6Q9C0G6 4158 aa7.02□□□□□ -1.29
SPRED3-201ENST00000338502 MT1FP04733 61 aa7.01□□□□□ -1.29
SPRED3-201ENST00000338502 FAT2Q9NYQ8 4349 aa7.01□□□□□ -1.29
SPRED3-201ENST00000338502 APOBP04114 4563 aaKnown RBP7.01□□□□□ -1.29
SPRED3-201ENST00000338502 KRTAP10-5P60370 271 aa7□□□□□ -1.29
SPRED3-201ENST00000338502 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
SPRED3-201ENST00000338502 MYCBP2O75592 4640 aa6.95□□□□□ -1.3
SPRED3-201ENST00000338502 KIAA1109Q2LD37 5005 aa6.95□□□□□ -1.3
SPRED3-201ENST00000338502 VPS13BQ7Z7G8 4022 aa6.9□□□□□ -1.3
SPRED3-201ENST00000338502 KRTAP19-4Q3LI73 84 aa6.81□□□□□ -1.32
SPRED3-201ENST00000338502 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
SPRED3-201ENST00000338502 RYR3Q15413 4870 aa6.79□□□□□ -1.32
SPRED3-201ENST00000338502 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
SPRED3-201ENST00000338502 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
SPRED3-201ENST00000338502 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
SPRED3-201ENST00000338502 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
SPRED3-201ENST00000338502 LRP1Q07954 4544 aaKnown RBP6.67□□□□□ -1.34
SPRED3-201ENST00000338502 RYR2Q92736 4967 aa6.66□□□□□ -1.34
SPRED3-201ENST00000338502 HYDINQ4G0P3 5121 aa6.64□□□□□ -1.35
SPRED3-201ENST00000338502 FAT3Q8TDW7 4589 aa6.63□□□□□ -1.35
SPRED3-201ENST00000338502 SPRR2FQ96RM1 72 aa6.61□□□□□ -1.35
SPRED3-201ENST00000338502 PKHD1P08F94 4074 aa6.58□□□□□ -1.36
SPRED3-201ENST00000338502 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
SPRED3-201ENST00000338502 MT1XP80297 61 aa6.52□□□□□ -1.37
SPRED3-201ENST00000338502 PKD1P98161 4303 aa6.49□□□□□ -1.37
SPRED3-201ENST00000338502 HERC2O95714 4834 aa6.48□□□□□ -1.37
SPRED3-201ENST00000338502 MT1BP07438 61 aa6.47□□□□□ -1.37
SPRED3-201ENST00000338502 LRP2P98164 4655 aa6.46□□□□□ -1.38
SPRED3-201ENST00000338502 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
SPRED3-201ENST00000338502 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
SPRED3-201ENST00000338502 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
SPRED3-201ENST00000338502 HSPG2P98160 4391 aa6.32□□□□□ -1.4
SPRED3-201ENST00000338502 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
SPRED3-201ENST00000338502 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.4
SPRED3-201ENST00000338502 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
SPRED3-201ENST00000338502 KRTAP4-8Q9BYQ9 185 aa6.2□□□□□ -1.42
SPRED3-201ENST00000338502 HERC1Q15751 4861 aa6.2□□□□□ -1.42
SPRED3-201ENST00000338502 BIRC6Q9NR09 4857 aa6.19□□□□□ -1.42
SPRED3-201ENST00000338502 PKHD1L1Q86WI1 4243 aa6.19□□□□□ -1.42
SPRED3-201ENST00000338502 KMT2CQ8NEZ4 4911 aaKnown RBP6.15□□□□□ -1.42
SPRED3-201ENST00000338502 MT1GP13640 62 aa6.15□□□□□ -1.43
SPRED3-201ENST00000338502 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
SPRED3-201ENST00000338502 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
SPRED3-201ENST00000338502 SPRR2EP22531 72 aa6.1□□□□□ -1.43
SPRED3-201ENST00000338502 SPRR2BP35325 72 aa6.1□□□□□ -1.43
SPRED3-201ENST00000338502 SPRR2AP35326 72 aa6.1□□□□□ -1.43
SPRED3-201ENST00000338502 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
SPRED3-201ENST00000338502 LPAP08519 4548 aa6.09□□□□□ -1.44
SPRED3-201ENST00000338502 TNXBP22105 4242 aa6.05□□□□□ -1.44
SPRED3-201ENST00000338502 MUC17Q685J3 4493 aa6.05□□□□□ -1.44
SPRED3-201ENST00000338502 EPPK1P58107 5090 aaKnown RBP6.01□□□□□ -1.45
SPRED3-201ENST00000338502 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
SPRED3-201ENST00000338502 LCE2BO14633 110 aa5.96□□□□□ -1.46
SPRED3-201ENST00000338502 ABCA13Q86UQ4 5058 aa5.92□□□□□ -1.46
SPRED3-201ENST00000338502 MT1LQ93083 61 aa5.91□□□□□ -1.46
SPRED3-201ENST00000338502 KRTAP19-3Q7Z4W3 81 aa5.9□□□□□ -1.46
SPRED3-201ENST00000338502 FLGP20930 4061 aaPredicted RBP5.9□□□□□ -1.47
SPRED3-201ENST00000338502 SPRR2DP22532 72 aa5.9□□□□□ -1.47
SPRED3-201ENST00000338502 LCE3DQ9BYE3 92 aa5.87□□□□□ -1.47
SPRED3-201ENST00000338502 MT1EP04732 61 aa5.86□□□□□ -1.47
SPRED3-201ENST00000338502 KRTAP4-7Q9BYR0 210 aa5.84□□□□□ -1.47
SPRED3-201ENST00000338502 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
SPRED3-201ENST00000338502 UBR4Q5T4S7 5183 aa5.73□□□□□ -1.49
SPRED3-201ENST00000338502 MT1MQ8N339 61 aa5.65□□□□□ -1.5
SPRED3-201ENST00000338502 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms