RNA–Protein interactions for RNA: ENST00000336665.9

AGAP1-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AGAP1, Length 5,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-202ENST00000336665 BSNQ9UPA5 3926 aa10.25□□□□□ -0.77
AGAP1-202ENST00000336665 MT2AP02795 61 aa10.24□□□□□ -0.77
AGAP1-202ENST00000336665 KRTAP4-1Q9BYQ7 146 aa10.22□□□□□ -0.77
AGAP1-202ENST00000336665 TRRAPQ9Y4A5 3859 aa10.22□□□□□ -0.77
AGAP1-202ENST00000336665 KRTAP10-7P60409 375 aaPredicted RBP10.16□□□□□ -0.78
AGAP1-202ENST00000336665 SPRR2GQ9BYE4 73 aa10.14□□□□□ -0.79
AGAP1-202ENST00000336665 SPRR2FQ96RM1 72 aa10.13□□□□□ -0.79
AGAP1-202ENST00000336665 CSMD2Q7Z408 3487 aa10.12□□□□□ -0.79
AGAP1-202ENST00000336665 DNAH5Q8TE73 4624 aa10.05□□□□□ -0.8
AGAP1-202ENST00000336665 PLECQ15149 4684 aaKnown RBP10□□□□□ -0.81
AGAP1-202ENST00000336665 VPS13CQ709C8 3753 aa9.97□□□□□ -0.81
AGAP1-202ENST00000336665 MT1FP04733 61 aa9.94□□□□□ -0.82
AGAP1-202ENST00000336665 DNAH1Q9P2D7 4330 aa9.91□□□□□ -0.82
AGAP1-202ENST00000336665 DNAH11Q96DT5 4516 aa9.87□□□□□ -0.83
AGAP1-202ENST00000336665 KRTAP19-4Q3LI73 84 aa9.87□□□□□ -0.83
AGAP1-202ENST00000336665 DNAH2Q9P225 4427 aa9.85□□□□□ -0.83
AGAP1-202ENST00000336665 KRTAP19-5Q3LI72 72 aa9.85□□□□□ -0.83
AGAP1-202ENST00000336665 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
AGAP1-202ENST00000336665 DNAH9Q9NYC9 4486 aa9.78□□□□□ -0.84
AGAP1-202ENST00000336665 LCE3CQ5T5A8 94 aa9.72□□□□□ -0.85
AGAP1-202ENST00000336665 FAT1Q14517 4588 aa9.64□□□□□ -0.87
AGAP1-202ENST00000336665 SPRR2EP22531 72 aa9.57□□□□□ -0.88
AGAP1-202ENST00000336665 SPRR2BP35325 72 aa9.57□□□□□ -0.88
AGAP1-202ENST00000336665 SPRR2AP35326 72 aa9.57□□□□□ -0.88
AGAP1-202ENST00000336665 DYNC1H1Q14204 4646 aaKnown RBP9.42□□□□□ -0.9
AGAP1-202ENST00000336665 ZNF469Q96JG9 3925 aaPredicted RBP9.42□□□□□ -0.9
AGAP1-202ENST00000336665 KRTAP19-8Q3LI54 63 aa9.39□□□□□ -0.91
AGAP1-202ENST00000336665 RYR1P21817 5038 aa9.37□□□□□ -0.91
AGAP1-202ENST00000336665 DNAH17Q9UFH2 4485 aa9.36□□□□□ -0.91
AGAP1-202ENST00000336665 DNHD1Q96M86 4753 aa9.34□□□□□ -0.91
AGAP1-202ENST00000336665 SPRR2DP22532 72 aa9.3□□□□□ -0.92
AGAP1-202ENST00000336665 SACSQ9NZJ4 4579 aa9.26□□□□□ -0.93
AGAP1-202ENST00000336665 VPS13DQ5THJ4 4388 aa9.25□□□□□ -0.93
AGAP1-202ENST00000336665 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
AGAP1-202ENST00000336665 LCE2BO14633 110 aa9.21□□□□□ -0.93
AGAP1-202ENST00000336665 AKAP9Q99996 3911 aa9.2□□□□□ -0.94
AGAP1-202ENST00000336665 KRTAP19-1Q8IUB9 90 aa9.19□□□□□ -0.94
AGAP1-202ENST00000336665 KRTAP12-4P60329 112 aa9.18□□□□□ -0.94
AGAP1-202ENST00000336665 FAT2Q9NYQ8 4349 aa9.17□□□□□ -0.94
AGAP1-202ENST00000336665 LCE3BQ5TA77 95 aa9.11□□□□□ -0.95
AGAP1-202ENST00000336665 CSMD3Q7Z407 3707 aa9.08□□□□□ -0.96
AGAP1-202ENST00000336665 LRP1Q07954 4544 aaKnown RBP9.08□□□□□ -0.96
AGAP1-202ENST00000336665 MT1XP80297 61 aa9.05□□□□□ -0.96
AGAP1-202ENST00000336665 DNAH8Q96JB1 4490 aa9.04□□□□□ -0.96
AGAP1-202ENST00000336665 DYNC2H1Q8NCM8 4307 aaKnown RBP9.03□□□□□ -0.96
AGAP1-202ENST00000336665 MT1GP13640 62 aa9□□□□□ -0.97
AGAP1-202ENST00000336665 HERC1Q15751 4861 aa8.96□□□□□ -0.98
AGAP1-202ENST00000336665 MT1BP07438 61 aa8.95□□□□□ -0.98
AGAP1-202ENST00000336665 RYR3Q15413 4870 aa8.95□□□□□ -0.98
AGAP1-202ENST00000336665 APOBP04114 4563 aaKnown RBP8.95□□□□□ -0.98
AGAP1-202ENST00000336665 FAT3Q8TDW7 4589 aa8.89□□□□□ -0.99
AGAP1-202ENST00000336665 KRTAP9-8Q9BYQ0 159 aa8.87□□□□□ -0.99
AGAP1-202ENST00000336665 STARD9Q9P2P6 4700 aa8.75□□□□□ -1.01
AGAP1-202ENST00000336665 KRTAP9-3Q9BYQ3 159 aa8.75□□□□□ -1.01
AGAP1-202ENST00000336665 DNAH3Q8TD57 4116 aa8.73□□□□□ -1.01
AGAP1-202ENST00000336665 KRTAP17-1Q9BYP8 105 aa8.73□□□□□ -1.01
AGAP1-202ENST00000336665 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
AGAP1-202ENST00000336665 KRTAP4-8Q9BYQ9 185 aa8.71□□□□□ -1.02
AGAP1-202ENST00000336665 LCE3DQ9BYE3 92 aa8.67□□□□□ -1.02
AGAP1-202ENST00000336665 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
AGAP1-202ENST00000336665 RYR2Q92736 4967 aa8.61□□□□□ -1.03
AGAP1-202ENST00000336665 KRTAP19-3Q7Z4W3 81 aa8.57□□□□□ -1.04
AGAP1-202ENST00000336665 VPS13BQ7Z7G8 4022 aa8.56□□□□□ -1.04
AGAP1-202ENST00000336665 HSPG2P98160 4391 aa8.55□□□□□ -1.04
AGAP1-202ENST00000336665 LCE3EQ5T5B0 92 aa8.54□□□□□ -1.04
AGAP1-202ENST00000336665 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
AGAP1-202ENST00000336665 KIAA1109Q2LD37 5005 aa8.53□□□□□ -1.04
AGAP1-202ENST00000336665 PRKDCP78527 4128 aaKnown RBP8.41□□□□□ -1.06
AGAP1-202ENST00000336665 PKD1P98161 4303 aa8.37□□□□□ -1.07
AGAP1-202ENST00000336665 ANK2Q01484 3957 aa8.37□□□□□ -1.07
AGAP1-202ENST00000336665 MT1LQ93083 61 aa8.36□□□□□ -1.07
AGAP1-202ENST00000336665 DNAH6Q9C0G6 4158 aa8.35□□□□□ -1.07
AGAP1-202ENST00000336665 BIRC6Q9NR09 4857 aa8.34□□□□□ -1.07
AGAP1-202ENST00000336665 SPRR5A0A1B0GTR4 108 aa8.33□□□□□ -1.08
AGAP1-202ENST00000336665 DNAH7Q8WXX0 4024 aa8.32□□□□□ -1.08
AGAP1-202ENST00000336665 PCLOQ9Y6V0 5065 aa8.28□□□□□ -1.08
AGAP1-202ENST00000336665 HERC2O95714 4834 aa8.28□□□□□ -1.08
AGAP1-202ENST00000336665 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
AGAP1-202ENST00000336665 MT1EP04732 61 aa8.26□□□□□ -1.09
AGAP1-202ENST00000336665 CMYA5Q8N3K9 4069 aa8.23□□□□□ -1.09
AGAP1-202ENST00000336665 MT3P25713 68 aa8.21□□□□□ -1.1
AGAP1-202ENST00000336665 LYSTQ99698 3801 aa8.19□□□□□ -1.1
AGAP1-202ENST00000336665 PKHD1L1Q86WI1 4243 aa8.15□□□□□ -1.1
AGAP1-202ENST00000336665 KMT2AQ03164 3969 aa8.13□□□□□ -1.11
AGAP1-202ENST00000336665 MT4P47944 62 aa8.13□□□□□ -1.11
AGAP1-202ENST00000336665 KRTAP9-2Q9BYQ4 174 aa8.11□□□□□ -1.11
AGAP1-202ENST00000336665 KRTAP19-6Q3LI70 58 aa8.1□□□□□ -1.11
AGAP1-202ENST00000336665 KRTAP4-7Q9BYR0 210 aa8.1□□□□□ -1.11
AGAP1-202ENST00000336665 EPPK1P58107 5090 aaKnown RBP8.08□□□□□ -1.12
AGAP1-202ENST00000336665 MT1MQ8N339 61 aa8.07□□□□□ -1.12
AGAP1-202ENST00000336665 FRAS1Q86XX4 4008 aa8.03□□□□□ -1.12
AGAP1-202ENST00000336665 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
AGAP1-202ENST00000336665 LCE1BQ5T7P3 118 aa7.85□□□□□ -1.15
AGAP1-202ENST00000336665 LRP2P98164 4655 aa7.82□□□□□ -1.16
AGAP1-202ENST00000336665 KRTAP9-6A0A140TA67 174 aa7.81□□□□□ -1.16
AGAP1-202ENST00000336665 LCE1DQ5T752 114 aa7.81□□□□□ -1.16
AGAP1-202ENST00000336665 HECTD4Q9Y4D8 3996 aa7.69□□□□□ -1.18
AGAP1-202ENST00000336665 PRM1P04553 51 aa7.68□□□□□ -1.18
AGAP1-202ENST00000336665 KMT2CQ8NEZ4 4911 aaKnown RBP7.67□□□□□ -1.18
AGAP1-202ENST00000336665 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms