RNA–Protein interactions for RNA: ENST00000334126.11

C2CD3-202, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C2CD3, Length 7,960 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-202ENST00000334126 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
C2CD3-202ENST00000334126 KRTAP10-12P60413 245 aa3.97□□□□□ -1.77
C2CD3-202ENST00000334126 KRTAP12-3P60328 96 aa3.96□□□□□ -1.77
C2CD3-202ENST00000334126 DNAH2Q9P225 4427 aa3.96□□□□□ -1.78
C2CD3-202ENST00000334126 DNAH7Q8WXX0 4024 aa3.93□□□□□ -1.78
C2CD3-202ENST00000334126 CSMD3Q7Z407 3707 aa3.92□□□□□ -1.78
C2CD3-202ENST00000334126 ZNF469Q96JG9 3925 aaPredicted RBP3.9□□□□□ -1.78
C2CD3-202ENST00000334126 ANK2Q01484 3957 aa3.9□□□□□ -1.78
C2CD3-202ENST00000334126 HUWE1Q7Z6Z7 4374 aaKnown RBP3.89□□□□□ -1.79
C2CD3-202ENST00000334126 LORP23490 312 aaPredicted RBP3.87□□□□□ -1.79
C2CD3-202ENST00000334126 KRTAP10-4P60372 401 aaPredicted RBP3.87□□□□□ -1.79
C2CD3-202ENST00000334126 DNAH1Q9P2D7 4330 aa3.87□□□□□ -1.79
C2CD3-202ENST00000334126 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
C2CD3-202ENST00000334126 FRAS1Q86XX4 4008 aa3.82□□□□□ -1.8
C2CD3-202ENST00000334126 VPS13BQ7Z7G8 4022 aa3.82□□□□□ -1.8
C2CD3-202ENST00000334126 DNAH10Q8IVF4 4471 aa3.76□□□□□ -1.81
C2CD3-202ENST00000334126 PRKDCP78527 4128 aaKnown RBP3.76□□□□□ -1.81
C2CD3-202ENST00000334126 KRTAP8-1Q8IUC2 63 aa3.75□□□□□ -1.81
C2CD3-202ENST00000334126 MT1HL1P0DM35 61 aa3.75□□□□□ -1.81
C2CD3-202ENST00000334126 DYNC2H1Q8NCM8 4307 aaKnown RBP3.73□□□□□ -1.81
C2CD3-202ENST00000334126 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
C2CD3-202ENST00000334126 SPRR2GQ9BYE4 73 aa3.7□□□□□ -1.82
C2CD3-202ENST00000334126 DNAH11Q96DT5 4516 aa3.69□□□□□ -1.82
C2CD3-202ENST00000334126 KMT2AQ03164 3969 aa3.68□□□□□ -1.82
C2CD3-202ENST00000334126 DNAH17Q9UFH2 4485 aa3.66□□□□□ -1.82
C2CD3-202ENST00000334126 VPS13DQ5THJ4 4388 aa3.66□□□□□ -1.82
C2CD3-202ENST00000334126 KRTAP4-5Q9BYR2 181 aa3.64□□□□□ -1.83
C2CD3-202ENST00000334126 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
C2CD3-202ENST00000334126 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
C2CD3-202ENST00000334126 DNAH9Q9NYC9 4486 aa3.57□□□□□ -1.84
C2CD3-202ENST00000334126 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
C2CD3-202ENST00000334126 PKHD1P08F94 4074 aa3.51□□□□□ -1.85
C2CD3-202ENST00000334126 FAT2Q9NYQ8 4349 aa3.47□□□□□ -1.85
C2CD3-202ENST00000334126 PLECQ15149 4684 aaKnown RBP3.44□□□□□ -1.86
C2CD3-202ENST00000334126 PKHD1L1Q86WI1 4243 aa3.39□□□□□ -1.87
C2CD3-202ENST00000334126 SPRR2FQ96RM1 72 aa3.39□□□□□ -1.87
C2CD3-202ENST00000334126 HSPG2P98160 4391 aa3.38□□□□□ -1.87
C2CD3-202ENST00000334126 KRTAP19-8Q3LI54 63 aa3.37□□□□□ -1.87
C2CD3-202ENST00000334126 STARD9Q9P2P6 4700 aa3.37□□□□□ -1.87
C2CD3-202ENST00000334126 DNAH5Q8TE73 4624 aa3.37□□□□□ -1.87
C2CD3-202ENST00000334126 PKD1P98161 4303 aa3.36□□□□□ -1.87
C2CD3-202ENST00000334126 KRTAP19-5Q3LI72 72 aa3.33□□□□□ -1.88
C2CD3-202ENST00000334126 SACSQ9NZJ4 4579 aa3.32□□□□□ -1.88
C2CD3-202ENST00000334126 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
C2CD3-202ENST00000334126 TNXBP22105 4242 aa3.3□□□□□ -1.88
C2CD3-202ENST00000334126 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
C2CD3-202ENST00000334126 DYNC1H1Q14204 4646 aaKnown RBP3.29□□□□□ -1.88
C2CD3-202ENST00000334126 KRTAP19-1Q8IUB9 90 aa3.26□□□□□ -1.89
C2CD3-202ENST00000334126 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
C2CD3-202ENST00000334126 MT2AP02795 61 aa3.24□□□□□ -1.89
C2CD3-202ENST00000334126 SPRR2EP22531 72 aa3.23□□□□□ -1.89
C2CD3-202ENST00000334126 SPRR2BP35325 72 aa3.23□□□□□ -1.89
C2CD3-202ENST00000334126 SPRR2AP35326 72 aa3.23□□□□□ -1.89
C2CD3-202ENST00000334126 MT3P25713 68 aa3.21□□□□□ -1.9
C2CD3-202ENST00000334126 MT1HP80294 61 aa3.19□□□□□ -1.9
C2CD3-202ENST00000334126 MT1XP80297 61 aa3.19□□□□□ -1.9
C2CD3-202ENST00000334126 LRP1BQ9NZR2 4599 aa3.18□□□□□ -1.9
C2CD3-202ENST00000334126 APOBP04114 4563 aaKnown RBP3.18□□□□□ -1.9
C2CD3-202ENST00000334126 LRP1Q07954 4544 aaKnown RBP3.18□□□□□ -1.9
C2CD3-202ENST00000334126 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
C2CD3-202ENST00000334126 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
C2CD3-202ENST00000334126 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
C2CD3-202ENST00000334126 MT1FP04733 61 aa3.14□□□□□ -1.91
C2CD3-202ENST00000334126 FAT1Q14517 4588 aa3.12□□□□□ -1.91
C2CD3-202ENST00000334126 SPRR2DP22532 72 aa3.1□□□□□ -1.91
C2CD3-202ENST00000334126 MT1LQ93083 61 aa3.1□□□□□ -1.91
C2CD3-202ENST00000334126 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
C2CD3-202ENST00000334126 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
C2CD3-202ENST00000334126 LCE3DQ9BYE3 92 aa3.07□□□□□ -1.92
C2CD3-202ENST00000334126 MYCBP2O75592 4640 aa3.04□□□□□ -1.92
C2CD3-202ENST00000334126 MT1EP04732 61 aa3.04□□□□□ -1.92
C2CD3-202ENST00000334126 MT1BP07438 61 aa3.03□□□□□ -1.92
C2CD3-202ENST00000334126 MT1GP13640 62 aa3□□□□□ -1.93
C2CD3-202ENST00000334126 FAT3Q8TDW7 4589 aa3□□□□□ -1.93
C2CD3-202ENST00000334126 LCE2BO14633 110 aa2.97□□□□□ -1.93
C2CD3-202ENST00000334126 KRTAP19-2Q3LHN2 52 aa2.95□□□□□ -1.94
C2CD3-202ENST00000334126 MT4P47944 62 aa2.94□□□□□ -1.94
C2CD3-202ENST00000334126 KRTAP9-8Q9BYQ0 159 aa2.94□□□□□ -1.94
C2CD3-202ENST00000334126 MT1AP04731 61 aa2.93□□□□□ -1.94
C2CD3-202ENST00000334126 LCE2CQ5TA81 110 aa2.9□□□□□ -1.95
C2CD3-202ENST00000334126 LCE2DQ5TA82 110 aaPredicted RBP2.89□□□□□ -1.95
C2CD3-202ENST00000334126 PRM1P04553 51 aa2.88□□□□□ -1.95
C2CD3-202ENST00000334126 KRTAP9-3Q9BYQ3 159 aa2.85□□□□□ -1.95
C2CD3-202ENST00000334126 KRTAP17-1Q9BYP8 105 aa2.82□□□□□ -1.96
C2CD3-202ENST00000334126 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
C2CD3-202ENST00000334126 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
C2CD3-202ENST00000334126 KRTAP4-8A0A0G2JLE6 195 aa2.8□□□□□ -1.96
C2CD3-202ENST00000334126 KRTAP4-8Q9BYQ9 185 aa2.8□□□□□ -1.96
C2CD3-202ENST00000334126 LRP2P98164 4655 aa2.79□□□□□ -1.96
C2CD3-202ENST00000334126 DNHD1Q96M86 4753 aa2.78□□□□□ -1.96
C2CD3-202ENST00000334126 MUC17Q685J3 4493 aa2.78□□□□□ -1.96
C2CD3-202ENST00000334126 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
C2CD3-202ENST00000334126 MT1MQ8N339 61 aa2.74□□□□□ -1.97
C2CD3-202ENST00000334126 RYR1P21817 5038 aa2.74□□□□□ -1.97
C2CD3-202ENST00000334126 KRTAP19-7Q3SYF9 63 aa2.68□□□□□ -1.98
C2CD3-202ENST00000334126 KRTAP9-2Q9BYQ4 174 aa2.67□□□□□ -1.98
C2CD3-202ENST00000334126 LCE5AQ5TCM9 118 aa2.65□□□□□ -1.98
C2CD3-202ENST00000334126 KRTAP4-7Q9BYR0 210 aa2.65□□□□□ -1.99
C2CD3-202ENST00000334126 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
C2CD3-202ENST00000334126 RYR2Q92736 4967 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms