RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 ALMS1Q8TCU4 4167 aa4.6□□□□□ -1.67
CLN8-201ENST00000331222 KMT2AQ03164 3969 aa4.6□□□□□ -1.67
CLN8-201ENST00000331222 DNAH10Q8IVF4 4471 aa4.58□□□□□ -1.68
CLN8-201ENST00000331222 KRTAP3-3Q9BYR6 98 aa4.57□□□□□ -1.68
CLN8-201ENST00000331222 LYSTQ99698 3801 aa4.57□□□□□ -1.68
CLN8-201ENST00000331222 KRTAP8-1Q8IUC2 63 aa4.56□□□□□ -1.68
CLN8-201ENST00000331222 INE1O15225 51 aa4.55□□□□□ -1.68
CLN8-201ENST00000331222 KRTAP3-2Q9BYR7 98 aa4.52□□□□□ -1.69
CLN8-201ENST00000331222 ANK2Q01484 3957 aa4.5□□□□□ -1.69
CLN8-201ENST00000331222 DNAH2Q9P225 4427 aa4.48□□□□□ -1.69
CLN8-201ENST00000331222 DNAH9Q9NYC9 4486 aa4.46□□□□□ -1.7
CLN8-201ENST00000331222 DNAH1Q9P2D7 4330 aa4.44□□□□□ -1.7
CLN8-201ENST00000331222 CMYA5Q8N3K9 4069 aa4.44□□□□□ -1.7
CLN8-201ENST00000331222 KRTAP10-4P60372 401 aaPredicted RBP4.44□□□□□ -1.7
CLN8-201ENST00000331222 VPS13BQ7Z7G8 4022 aa4.44□□□□□ -1.7
CLN8-201ENST00000331222 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
CLN8-201ENST00000331222 DNAH3Q8TD57 4116 aa4.4□□□□□ -1.7
CLN8-201ENST00000331222 DNAH17Q9UFH2 4485 aa4.4□□□□□ -1.7
CLN8-201ENST00000331222 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
CLN8-201ENST00000331222 RYR1P21817 5038 aa4.37□□□□□ -1.71
CLN8-201ENST00000331222 VPS13DQ5THJ4 4388 aa4.32□□□□□ -1.72
CLN8-201ENST00000331222 DNAH11Q96DT5 4516 aa4.31□□□□□ -1.72
CLN8-201ENST00000331222 DNAH7Q8WXX0 4024 aa4.31□□□□□ -1.72
CLN8-201ENST00000331222 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
CLN8-201ENST00000331222 DYNC1H1Q14204 4646 aaKnown RBP4.29□□□□□ -1.72
CLN8-201ENST00000331222 DNAH5Q8TE73 4624 aa4.26□□□□□ -1.73
CLN8-201ENST00000331222 DNAH6Q9C0G6 4158 aa4.25□□□□□ -1.73
CLN8-201ENST00000331222 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
CLN8-201ENST00000331222 RYR2Q92736 4967 aa4.24□□□□□ -1.73
CLN8-201ENST00000331222 DNAH8Q96JB1 4490 aa4.24□□□□□ -1.73
CLN8-201ENST00000331222 DYNC2H1Q8NCM8 4307 aaKnown RBP4.24□□□□□ -1.73
CLN8-201ENST00000331222 STARD9Q9P2P6 4700 aa4.23□□□□□ -1.73
CLN8-201ENST00000331222 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
CLN8-201ENST00000331222 KRTAP4-1Q9BYQ7 146 aa4.21□□□□□ -1.74
CLN8-201ENST00000331222 FAT2Q9NYQ8 4349 aa4.21□□□□□ -1.74
CLN8-201ENST00000331222 MT1HP80294 61 aa4.21□□□□□ -1.74
CLN8-201ENST00000331222 FAT1Q14517 4588 aa4.18□□□□□ -1.74
CLN8-201ENST00000331222 HERC1Q15751 4861 aa4.18□□□□□ -1.74
CLN8-201ENST00000331222 FAT3Q8TDW7 4589 aa4.17□□□□□ -1.74
CLN8-201ENST00000331222 KRTAP19-5Q3LI72 72 aa4.14□□□□□ -1.75
CLN8-201ENST00000331222 PCLOQ9Y6V0 5065 aa4.13□□□□□ -1.75
CLN8-201ENST00000331222 HECTD4Q9Y4D8 3996 aa4.13□□□□□ -1.75
CLN8-201ENST00000331222 KRTAP23-1A1A580 65 aa4.12□□□□□ -1.75
CLN8-201ENST00000331222 BIRC6Q9NR09 4857 aa4.12□□□□□ -1.75
CLN8-201ENST00000331222 LRP1BQ9NZR2 4599 aa4.1□□□□□ -1.75
CLN8-201ENST00000331222 DNHD1Q96M86 4753 aa4.09□□□□□ -1.75
CLN8-201ENST00000331222 MYCBP2O75592 4640 aa4.08□□□□□ -1.76
CLN8-201ENST00000331222 SPRR2EP22531 72 aa4.08□□□□□ -1.76
CLN8-201ENST00000331222 SPRR2BP35325 72 aa4.08□□□□□ -1.76
CLN8-201ENST00000331222 SPRR2AP35326 72 aa4.08□□□□□ -1.76
CLN8-201ENST00000331222 PKHD1P08F94 4074 aa4.06□□□□□ -1.76
CLN8-201ENST00000331222 MT2AP02795 61 aa4.06□□□□□ -1.76
CLN8-201ENST00000331222 LCE3BQ5TA77 95 aa4.04□□□□□ -1.76
CLN8-201ENST00000331222 MT1FP04733 61 aa4.02□□□□□ -1.77
CLN8-201ENST00000331222 RYR3Q15413 4870 aa4□□□□□ -1.77
CLN8-201ENST00000331222 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
CLN8-201ENST00000331222 APOBP04114 4563 aaKnown RBP3.98□□□□□ -1.77
CLN8-201ENST00000331222 LRP1Q07954 4544 aaKnown RBP3.95□□□□□ -1.78
CLN8-201ENST00000331222 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
CLN8-201ENST00000331222 HSPG2P98160 4391 aa3.94□□□□□ -1.78
CLN8-201ENST00000331222 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
CLN8-201ENST00000331222 SPRR2DP22532 72 aa3.91□□□□□ -1.78
CLN8-201ENST00000331222 KMT2CQ8NEZ4 4911 aaKnown RBP3.9□□□□□ -1.78
CLN8-201ENST00000331222 HYDINQ4G0P3 5121 aa3.89□□□□□ -1.79
CLN8-201ENST00000331222 MT1GP13640 62 aa3.88□□□□□ -1.79
CLN8-201ENST00000331222 LPAP08519 4548 aa3.88□□□□□ -1.79
CLN8-201ENST00000331222 LCE2BO14633 110 aa3.84□□□□□ -1.79
CLN8-201ENST00000331222 PKD1P98161 4303 aa3.81□□□□□ -1.8
CLN8-201ENST00000331222 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
CLN8-201ENST00000331222 FLGP20930 4061 aaPredicted RBP3.76□□□□□ -1.81
CLN8-201ENST00000331222 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
CLN8-201ENST00000331222 KRTAP4-8A0A0G2JLE6 195 aa3.75□□□□□ -1.81
CLN8-201ENST00000331222 KRTAP4-8Q9BYQ9 185 aa3.75□□□□□ -1.81
CLN8-201ENST00000331222 HERC2O95714 4834 aa3.73□□□□□ -1.81
CLN8-201ENST00000331222 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
CLN8-201ENST00000331222 LRP2P98164 4655 aa3.71□□□□□ -1.82
CLN8-201ENST00000331222 PKHD1L1Q86WI1 4243 aa3.7□□□□□ -1.82
CLN8-201ENST00000331222 TNXBP22105 4242 aa3.65□□□□□ -1.83
CLN8-201ENST00000331222 MT4P47944 62 aa3.64□□□□□ -1.83
CLN8-201ENST00000331222 KRTAP19-1Q8IUB9 90 aa3.64□□□□□ -1.83
CLN8-201ENST00000331222 LCE2CQ5TA81 110 aa3.64□□□□□ -1.83
CLN8-201ENST00000331222 MT1XP80297 61 aa3.63□□□□□ -1.83
CLN8-201ENST00000331222 SPRR5A0A1B0GTR4 108 aa3.62□□□□□ -1.83
CLN8-201ENST00000331222 LCE2DQ5TA82 110 aaPredicted RBP3.6□□□□□ -1.83
CLN8-201ENST00000331222 EPPK1P58107 5090 aaKnown RBP3.59□□□□□ -1.83
CLN8-201ENST00000331222 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
CLN8-201ENST00000331222 MUC17Q685J3 4493 aa3.57□□□□□ -1.84
CLN8-201ENST00000331222 KRTAP4-7Q9BYR0 210 aa3.56□□□□□ -1.84
CLN8-201ENST00000331222 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
CLN8-201ENST00000331222 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
CLN8-201ENST00000331222 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
CLN8-201ENST00000331222 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
CLN8-201ENST00000331222 KRTAP9-8Q9BYQ0 159 aa3.5□□□□□ -1.85
CLN8-201ENST00000331222 MT1BP07438 61 aa3.5□□□□□ -1.85
CLN8-201ENST00000331222 LCE3EQ5T5B0 92 aa3.48□□□□□ -1.85
CLN8-201ENST00000331222 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
CLN8-201ENST00000331222 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
CLN8-201ENST00000331222 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
CLN8-201ENST00000331222 KRTAP9-3Q9BYQ3 159 aa3.4□□□□□ -1.86
CLN8-201ENST00000331222 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms