RNA–Protein interactions for RNA: ENST00000318560.5

ABL1-201, Transcript of ABL proto-oncogene 1, non-receptor tyrosine kinase, humanhuman

TSL 1 (best) BASIC

Gene ABL1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABL1-201ENST00000318560 TRRAPQ9Y4A5 3859 aa10.49□□□□□ -0.73
ABL1-201ENST00000318560 ALMS1Q8TCU4 4167 aa10.45□□□□□ -0.74
ABL1-201ENST00000318560 MT1HP80294 61 aa10.44□□□□□ -0.74
ABL1-201ENST00000318560 HUWE1Q7Z6Z7 4374 aaKnown RBP10.42□□□□□ -0.74
ABL1-201ENST00000318560 KRTAP4-1Q9BYQ7 146 aa10.3□□□□□ -0.76
ABL1-201ENST00000318560 MT2AP02795 61 aa10.28□□□□□ -0.76
ABL1-201ENST00000318560 SPRR2FQ96RM1 72 aa10.27□□□□□ -0.77
ABL1-201ENST00000318560 KRTAP10-7P60409 375 aaPredicted RBP10.24□□□□□ -0.77
ABL1-201ENST00000318560 ZNF469Q96JG9 3925 aaPredicted RBP10.2□□□□□ -0.78
ABL1-201ENST00000318560 DNAH5Q8TE73 4624 aa10.11□□□□□ -0.79
ABL1-201ENST00000318560 SPRR2GQ9BYE4 73 aa10.11□□□□□ -0.79
ABL1-201ENST00000318560 PLECQ15149 4684 aaKnown RBP10.09□□□□□ -0.79
ABL1-201ENST00000318560 MT1FP04733 61 aa10□□□□□ -0.81
ABL1-201ENST00000318560 AKAP9Q99996 3911 aa9.93□□□□□ -0.82
ABL1-201ENST00000318560 KRTAP19-5Q3LI72 72 aa9.91□□□□□ -0.82
ABL1-201ENST00000318560 DNAH1Q9P2D7 4330 aa9.87□□□□□ -0.83
ABL1-201ENST00000318560 DNAH11Q96DT5 4516 aa9.82□□□□□ -0.84
ABL1-201ENST00000318560 DNAH10Q8IVF4 4471 aa9.82□□□□□ -0.84
ABL1-201ENST00000318560 FAT1Q14517 4588 aa9.81□□□□□ -0.84
ABL1-201ENST00000318560 DNAH9Q9NYC9 4486 aa9.79□□□□□ -0.84
ABL1-201ENST00000318560 LCE3CQ5T5A8 94 aa9.71□□□□□ -0.85
ABL1-201ENST00000318560 SPRR2EP22531 72 aa9.69□□□□□ -0.86
ABL1-201ENST00000318560 SPRR2BP35325 72 aa9.69□□□□□ -0.86
ABL1-201ENST00000318560 SPRR2AP35326 72 aa9.69□□□□□ -0.86
ABL1-201ENST00000318560 DNAH2Q9P225 4427 aa9.68□□□□□ -0.86
ABL1-201ENST00000318560 KRTAP19-4Q3LI73 84 aa9.68□□□□□ -0.86
ABL1-201ENST00000318560 CSMD3Q7Z407 3707 aa9.57□□□□□ -0.88
ABL1-201ENST00000318560 DNHD1Q96M86 4753 aa9.53□□□□□ -0.88
ABL1-201ENST00000318560 RYR1P21817 5038 aa9.52□□□□□ -0.89
ABL1-201ENST00000318560 DYNC1H1Q14204 4646 aaKnown RBP9.44□□□□□ -0.9
ABL1-201ENST00000318560 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
ABL1-201ENST00000318560 SPRR2DP22532 72 aa9.39□□□□□ -0.91
ABL1-201ENST00000318560 KRTAP19-8Q3LI54 63 aa9.33□□□□□ -0.92
ABL1-201ENST00000318560 SACSQ9NZJ4 4579 aa9.32□□□□□ -0.92
ABL1-201ENST00000318560 LRP1BQ9NZR2 4599 aa9.29□□□□□ -0.92
ABL1-201ENST00000318560 LCE2BO14633 110 aa9.29□□□□□ -0.92
ABL1-201ENST00000318560 KRTAP12-4P60329 112 aa9.24□□□□□ -0.93
ABL1-201ENST00000318560 LCE3BQ5TA77 95 aa9.23□□□□□ -0.93
ABL1-201ENST00000318560 KRTAP19-1Q8IUB9 90 aa9.2□□□□□ -0.94
ABL1-201ENST00000318560 VPS13DQ5THJ4 4388 aa9.19□□□□□ -0.94
ABL1-201ENST00000318560 DNAH8Q96JB1 4490 aa9.19□□□□□ -0.94
ABL1-201ENST00000318560 FAT2Q9NYQ8 4349 aa9.18□□□□□ -0.94
ABL1-201ENST00000318560 MT1GP13640 62 aa9.09□□□□□ -0.95
ABL1-201ENST00000318560 MT1XP80297 61 aa9.06□□□□□ -0.96
ABL1-201ENST00000318560 LRP1Q07954 4544 aaKnown RBP9.05□□□□□ -0.96
ABL1-201ENST00000318560 FAT3Q8TDW7 4589 aa9.01□□□□□ -0.97
ABL1-201ENST00000318560 ANK2Q01484 3957 aa9□□□□□ -0.97
ABL1-201ENST00000318560 APOBP04114 4563 aaKnown RBP8.99□□□□□ -0.97
ABL1-201ENST00000318560 RYR3Q15413 4870 aa8.98□□□□□ -0.97
ABL1-201ENST00000318560 DYNC2H1Q8NCM8 4307 aaKnown RBP8.97□□□□□ -0.97
ABL1-201ENST00000318560 MT1BP07438 61 aa8.96□□□□□ -0.98
ABL1-201ENST00000318560 KRTAP9-8Q9BYQ0 159 aa8.9□□□□□ -0.99
ABL1-201ENST00000318560 KRTAP4-8A0A0G2JLE6 195 aa8.84□□□□□ -0.99
ABL1-201ENST00000318560 KRTAP4-8Q9BYQ9 185 aa8.84□□□□□ -0.99
ABL1-201ENST00000318560 KRTAP17-1Q9BYP8 105 aa8.83□□□□□ -1
ABL1-201ENST00000318560 STARD9Q9P2P6 4700 aa8.8□□□□□ -1
ABL1-201ENST00000318560 LYSTQ99698 3801 aa8.78□□□□□ -1
ABL1-201ENST00000318560 KRTAP9-3Q9BYQ3 159 aa8.75□□□□□ -1.01
ABL1-201ENST00000318560 HERC1Q15751 4861 aa8.73□□□□□ -1.01
ABL1-201ENST00000318560 VPS13BQ7Z7G8 4022 aa8.73□□□□□ -1.01
ABL1-201ENST00000318560 LCE2CQ5TA81 110 aa8.72□□□□□ -1.01
ABL1-201ENST00000318560 LCE3DQ9BYE3 92 aa8.71□□□□□ -1.02
ABL1-201ENST00000318560 CMYA5Q8N3K9 4069 aa8.7□□□□□ -1.02
ABL1-201ENST00000318560 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.02
ABL1-201ENST00000318560 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.03
ABL1-201ENST00000318560 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
ABL1-201ENST00000318560 KMT2AQ03164 3969 aa8.61□□□□□ -1.03
ABL1-201ENST00000318560 PRKDCP78527 4128 aaKnown RBP8.61□□□□□ -1.03
ABL1-201ENST00000318560 KRTAP19-3Q7Z4W3 81 aa8.58□□□□□ -1.04
ABL1-201ENST00000318560 DNAH7Q8WXX0 4024 aa8.55□□□□□ -1.04
ABL1-201ENST00000318560 LCE3EQ5T5B0 92 aa8.55□□□□□ -1.04
ABL1-201ENST00000318560 RYR2Q92736 4967 aa8.52□□□□□ -1.05
ABL1-201ENST00000318560 FRAS1Q86XX4 4008 aa8.5□□□□□ -1.05
ABL1-201ENST00000318560 MYCBP2O75592 4640 aa8.48□□□□□ -1.05
ABL1-201ENST00000318560 PKD1P98161 4303 aa8.39□□□□□ -1.07
ABL1-201ENST00000318560 PCLOQ9Y6V0 5065 aa8.37□□□□□ -1.07
ABL1-201ENST00000318560 HSPG2P98160 4391 aa8.33□□□□□ -1.08
ABL1-201ENST00000318560 DNAH6Q9C0G6 4158 aa8.33□□□□□ -1.08
ABL1-201ENST00000318560 MT1LQ93083 61 aa8.33□□□□□ -1.08
ABL1-201ENST00000318560 HECTD4Q9Y4D8 3996 aa8.33□□□□□ -1.08
ABL1-201ENST00000318560 BIRC6Q9NR09 4857 aa8.32□□□□□ -1.08
ABL1-201ENST00000318560 HERC2O95714 4834 aa8.32□□□□□ -1.08
ABL1-201ENST00000318560 MT4P47944 62 aa8.3□□□□□ -1.08
ABL1-201ENST00000318560 MT1EP04732 61 aa8.26□□□□□ -1.09
ABL1-201ENST00000318560 EPPK1P58107 5090 aaKnown RBP8.25□□□□□ -1.09
ABL1-201ENST00000318560 KRTAP9-2Q9BYQ4 174 aa8.24□□□□□ -1.09
ABL1-201ENST00000318560 KRTAP4-7Q9BYR0 210 aa8.22□□□□□ -1.09
ABL1-201ENST00000318560 MT3P25713 68 aa8.22□□□□□ -1.09
ABL1-201ENST00000318560 SPRR5A0A1B0GTR4 108 aa8.19□□□□□ -1.1
ABL1-201ENST00000318560 HYDINQ4G0P3 5121 aa8.1□□□□□ -1.11
ABL1-201ENST00000318560 PKHD1L1Q86WI1 4243 aa8.1□□□□□ -1.11
ABL1-201ENST00000318560 MT1MQ8N339 61 aa8.08□□□□□ -1.12
ABL1-201ENST00000318560 KRTAP19-6Q3LI70 58 aa8.08□□□□□ -1.12
ABL1-201ENST00000318560 LCE1BQ5T7P3 118 aa8□□□□□ -1.13
ABL1-201ENST00000318560 SYNE1Q8NF91 8797 aaKnown RBP7.96□□□□□ -1.14
ABL1-201ENST00000318560 LRP2P98164 4655 aa7.95□□□□□ -1.14
ABL1-201ENST00000318560 KRTAP19-2Q3LHN2 52 aa7.94□□□□□ -1.14
ABL1-201ENST00000318560 LCE1DQ5T752 114 aa7.94□□□□□ -1.14
ABL1-201ENST00000318560 PKHD1P08F94 4074 aa7.93□□□□□ -1.14
ABL1-201ENST00000318560 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms