RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 CSAG1Q6PB30 78 aa3.38□□□□□ -1.87
SPATA9-202ENST00000316087 HECTD4Q9Y4D8 3996 aa3.38□□□□□ -1.87
SPATA9-202ENST00000316087 PLECQ15149 4684 aaKnown RBP3.38□□□□□ -1.87
SPATA9-202ENST00000316087 MEGF8Q7Z7M0 2845 aa3.38□□□□□ -1.87
SPATA9-202ENST00000316087 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
SPATA9-202ENST00000316087 FBN3Q75N90 2809 aa3.36□□□□□ -1.87
SPATA9-202ENST00000316087 COX6B2Q6YFQ2 88 aa3.36□□□□□ -1.87
SPATA9-202ENST00000316087 DNAH8Q96JB1 4490 aa3.36□□□□□ -1.87
SPATA9-202ENST00000316087 DNAH17Q9UFH2 4485 aa3.36□□□□□ -1.87
SPATA9-202ENST00000316087 H0YAA0 97 aa3.35□□□□□ -1.87
SPATA9-202ENST00000316087 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
SPATA9-202ENST00000316087 PRKDCP78527 4128 aaKnown RBP3.35□□□□□ -1.87
SPATA9-202ENST00000316087 STARD9Q9P2P6 4700 aa3.32□□□□□ -1.88
SPATA9-202ENST00000316087 DNHD1Q96M86 4753 aa3.3□□□□□ -1.88
SPATA9-202ENST00000316087 C9orf92A6NGG3 77 aa3.29□□□□□ -1.88
SPATA9-202ENST00000316087 DNAH6Q9C0G6 4158 aa3.29□□□□□ -1.88
SPATA9-202ENST00000316087 TGP01266 2768 aa3.29□□□□□ -1.88
SPATA9-202ENST00000316087 ROMO1P60602 79 aa3.29□□□□□ -1.88
SPATA9-202ENST00000316087 RPL37P61927 97 aaKnown RBP3.29□□□□□ -1.88
SPATA9-202ENST00000316087 FRAS1Q86XX4 4008 aa3.28□□□□□ -1.88
SPATA9-202ENST00000316087 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
SPATA9-202ENST00000316087 KRTAP21-3Q3LHN1 58 aa3.28□□□□□ -1.88
SPATA9-202ENST00000316087 KMT2AQ03164 3969 aa3.25□□□□□ -1.89
SPATA9-202ENST00000316087 S4R3F8 94 aa3.23□□□□□ -1.89
SPATA9-202ENST00000316087 A0A1B0GVY2 172 aa3.22□□□□□ -1.89
SPATA9-202ENST00000316087 KRTAP10-4P60372 401 aaPredicted RBP3.22□□□□□ -1.89
SPATA9-202ENST00000316087 SMR3BP02814 79 aaPredicted RBP3.21□□□□□ -1.89
SPATA9-202ENST00000316087 DNAH5Q8TE73 4624 aa3.21□□□□□ -1.89
SPATA9-202ENST00000316087 PKD1P98161 4303 aa3.21□□□□□ -1.9
SPATA9-202ENST00000316087 DNAH11Q96DT5 4516 aa3.21□□□□□ -1.9
SPATA9-202ENST00000316087 CRIPTQ9P021 101 aa3.2□□□□□ -1.9
SPATA9-202ENST00000316087 M0QZ58 72 aa3.18□□□□□ -1.9
SPATA9-202ENST00000316087 KRTAP10-6P60371 365 aaPredicted RBP3.18□□□□□ -1.9
SPATA9-202ENST00000316087 KRTAP10-8P60410 259 aa3.18□□□□□ -1.9
SPATA9-202ENST00000316087 LRP1BQ9NZR2 4599 aa3.18□□□□□ -1.9
SPATA9-202ENST00000316087 VPS13BQ7Z7G8 4022 aa3.15□□□□□ -1.9
SPATA9-202ENST00000316087 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
SPATA9-202ENST00000316087 SACSQ9NZJ4 4579 aa3.14□□□□□ -1.91
SPATA9-202ENST00000316087 FAT2Q9NYQ8 4349 aa3.13□□□□□ -1.91
SPATA9-202ENST00000316087 A0A0D9SG42 100 aa3.12□□□□□ -1.91
SPATA9-202ENST00000316087 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
SPATA9-202ENST00000316087 Q5VSD8 79 aa3.1□□□□□ -1.91
SPATA9-202ENST00000316087 TPRXLQ17RH7 258 aa3.09□□□□□ -1.91
SPATA9-202ENST00000316087 PKHD1L1Q86WI1 4243 aa3.09□□□□□ -1.91
SPATA9-202ENST00000316087 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
SPATA9-202ENST00000316087 FLG2Q5D862 2391 aaPredicted RBP3.08□□□□□ -1.92
SPATA9-202ENST00000316087 P0C880 135 aa3.08□□□□□ -1.92
SPATA9-202ENST00000316087 PKHD1P08F94 4074 aa3.07□□□□□ -1.92
SPATA9-202ENST00000316087 KRTAP12-1P59990 96 aa3.07□□□□□ -1.92
SPATA9-202ENST00000316087 APOBP04114 4563 aaKnown RBP3.06□□□□□ -1.92
SPATA9-202ENST00000316087 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
SPATA9-202ENST00000316087 HYDINQ4G0P3 5121 aa3.03□□□□□ -1.92
SPATA9-202ENST00000316087 R4GN34 69 aa3.01□□□□□ -1.93
SPATA9-202ENST00000316087 PP632Q6XCG6 107 aa3□□□□□ -1.93
SPATA9-202ENST00000316087 DYNC1H1Q14204 4646 aaKnown RBP2.99□□□□□ -1.93
SPATA9-202ENST00000316087 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
SPATA9-202ENST00000316087 DMBT1Q9UGM3 2413 aaPredicted RBP2.98□□□□□ -1.93
SPATA9-202ENST00000316087 MT1HL1P0DM35 61 aa2.98□□□□□ -1.93
SPATA9-202ENST00000316087 FAT3Q8TDW7 4589 aa2.96□□□□□ -1.94
SPATA9-202ENST00000316087 TNXBP22105 4242 aa2.94□□□□□ -1.94
SPATA9-202ENST00000316087 FAT1Q14517 4588 aa2.93□□□□□ -1.94
SPATA9-202ENST00000316087 LRP1Q07954 4544 aaKnown RBP2.92□□□□□ -1.94
SPATA9-202ENST00000316087 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
SPATA9-202ENST00000316087 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
SPATA9-202ENST00000316087 HSPG2P98160 4391 aa2.9□□□□□ -1.95
SPATA9-202ENST00000316087 KMT2CQ8NEZ4 4911 aaKnown RBP2.9□□□□□ -1.95
SPATA9-202ENST00000316087 KRTAP10-7P60409 375 aaPredicted RBP2.89□□□□□ -1.95
SPATA9-202ENST00000316087 RYR3Q15413 4870 aa2.88□□□□□ -1.95
SPATA9-202ENST00000316087 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
SPATA9-202ENST00000316087 RYR2Q92736 4967 aa2.85□□□□□ -1.95
SPATA9-202ENST00000316087 TNP1P09430 55 aa2.82□□□□□ -1.96
SPATA9-202ENST00000316087 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
SPATA9-202ENST00000316087 RYR1P21817 5038 aa2.77□□□□□ -1.97
SPATA9-202ENST00000316087 EPPK1P58107 5090 aaKnown RBP2.77□□□□□ -1.97
SPATA9-202ENST00000316087 MYCBP2O75592 4640 aa2.75□□□□□ -1.97
SPATA9-202ENST00000316087 BIRC6Q9NR09 4857 aa2.75□□□□□ -1.97
SPATA9-202ENST00000316087 KRTAP19-2Q3LHN2 52 aa2.73□□□□□ -1.97
SPATA9-202ENST00000316087 MT3P25713 68 aa2.72□□□□□ -1.97
SPATA9-202ENST00000316087 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
SPATA9-202ENST00000316087 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
SPATA9-202ENST00000316087 LRP2P98164 4655 aa2.7□□□□□ -1.98
SPATA9-202ENST00000316087 KRTAP5-9P26371 169 aa2.7□□□□□ -1.98
SPATA9-202ENST00000316087 KRTAP2-2Q9BYT5 123 aa2.69□□□□□ -1.98
SPATA9-202ENST00000316087 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
SPATA9-202ENST00000316087 LPAP08519 4548 aa2.67□□□□□ -1.98
SPATA9-202ENST00000316087 SPRR2GQ9BYE4 73 aa2.66□□□□□ -1.98
SPATA9-202ENST00000316087 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
SPATA9-202ENST00000316087 MUC17Q685J3 4493 aa2.65□□□□□ -1.98
SPATA9-202ENST00000316087 KIAA1109Q2LD37 5005 aa2.65□□□□□ -1.99
SPATA9-202ENST00000316087 HERC2O95714 4834 aa2.65□□□□□ -1.99
SPATA9-202ENST00000316087 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
SPATA9-202ENST00000316087 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -1.99
SPATA9-202ENST00000316087 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
SPATA9-202ENST00000316087 INE1O15225 51 aa2.57□□□□□ -2
SPATA9-202ENST00000316087 PCLOQ9Y6V0 5065 aa2.57□□□□□ -2
SPATA9-202ENST00000316087 ABCA13Q86UQ4 5058 aa2.57□□□□□ -2
SPATA9-202ENST00000316087 M0R2T5 61 aa2.57□□□□□ -2
SPATA9-202ENST00000316087 KRTAP8-1Q8IUC2 63 aa2.56□□□□□ -2
SPATA9-202ENST00000316087 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
SPATA9-202ENST00000316087 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms