RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 LORP23490 312 aaPredicted RBP4.34□□□□□ -1.71
TMOD3-201ENST00000308580 DNAH1Q9P2D7 4330 aa4.31□□□□□ -1.72
TMOD3-201ENST00000308580 KRTAP10-12P60413 245 aa4.31□□□□□ -1.72
TMOD3-201ENST00000308580 ALMS1Q8TCU4 4167 aa4.31□□□□□ -1.72
TMOD3-201ENST00000308580 AKAP9Q99996 3911 aa4.3□□□□□ -1.72
TMOD3-201ENST00000308580 DNAH10Q8IVF4 4471 aa4.29□□□□□ -1.72
TMOD3-201ENST00000308580 DYNC1H1Q14204 4646 aaKnown RBP4.26□□□□□ -1.73
TMOD3-201ENST00000308580 FAT1Q14517 4588 aa4.25□□□□□ -1.73
TMOD3-201ENST00000308580 RYR1P21817 5038 aa4.23□□□□□ -1.73
TMOD3-201ENST00000308580 VPS13DQ5THJ4 4388 aa4.22□□□□□ -1.73
TMOD3-201ENST00000308580 DNAH17Q9UFH2 4485 aa4.22□□□□□ -1.73
TMOD3-201ENST00000308580 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
TMOD3-201ENST00000308580 KRTAP4-1Q9BYQ7 146 aa4.2□□□□□ -1.74
TMOD3-201ENST00000308580 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
TMOD3-201ENST00000308580 LRP1BQ9NZR2 4599 aa4.18□□□□□ -1.74
TMOD3-201ENST00000308580 STARD9Q9P2P6 4700 aa4.17□□□□□ -1.74
TMOD3-201ENST00000308580 DNAH8Q96JB1 4490 aa4.16□□□□□ -1.74
TMOD3-201ENST00000308580 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
TMOD3-201ENST00000308580 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.74
TMOD3-201ENST00000308580 SACSQ9NZJ4 4579 aa4.12□□□□□ -1.75
TMOD3-201ENST00000308580 KIAA1109Q2LD37 5005 aa4.12□□□□□ -1.75
TMOD3-201ENST00000308580 INE1O15225 51 aa4.11□□□□□ -1.75
TMOD3-201ENST00000308580 DNAH2Q9P225 4427 aa4.1□□□□□ -1.75
TMOD3-201ENST00000308580 MT1HP80294 61 aa4.05□□□□□ -1.76
TMOD3-201ENST00000308580 APOBP04114 4563 aaKnown RBP4.04□□□□□ -1.76
TMOD3-201ENST00000308580 PRKDCP78527 4128 aaKnown RBP4.04□□□□□ -1.76
TMOD3-201ENST00000308580 MYCBP2O75592 4640 aa4.03□□□□□ -1.76
TMOD3-201ENST00000308580 MT2AP02795 61 aa4.02□□□□□ -1.77
TMOD3-201ENST00000308580 DYNC2H1Q8NCM8 4307 aaKnown RBP4□□□□□ -1.77
TMOD3-201ENST00000308580 FAT2Q9NYQ8 4349 aa3.99□□□□□ -1.77
TMOD3-201ENST00000308580 RYR3Q15413 4870 aa3.99□□□□□ -1.77
TMOD3-201ENST00000308580 SPRR2GQ9BYE4 73 aa3.98□□□□□ -1.77
TMOD3-201ENST00000308580 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
TMOD3-201ENST00000308580 MT1FP04733 61 aa3.95□□□□□ -1.78
TMOD3-201ENST00000308580 KRTAP17-1Q9BYP8 105 aa3.93□□□□□ -1.78
TMOD3-201ENST00000308580 LYSTQ99698 3801 aa3.93□□□□□ -1.78
TMOD3-201ENST00000308580 DNAH3Q8TD57 4116 aa3.93□□□□□ -1.78
TMOD3-201ENST00000308580 ANK2Q01484 3957 aa3.93□□□□□ -1.78
TMOD3-201ENST00000308580 KMT2AQ03164 3969 aa3.92□□□□□ -1.78
TMOD3-201ENST00000308580 VPS13BQ7Z7G8 4022 aa3.92□□□□□ -1.78
TMOD3-201ENST00000308580 LRP1Q07954 4544 aaKnown RBP3.88□□□□□ -1.79
TMOD3-201ENST00000308580 RYR2Q92736 4967 aa3.87□□□□□ -1.79
TMOD3-201ENST00000308580 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
TMOD3-201ENST00000308580 KRTAP10-5P60370 271 aa3.84□□□□□ -1.79
TMOD3-201ENST00000308580 HERC2O95714 4834 aa3.81□□□□□ -1.8
TMOD3-201ENST00000308580 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
TMOD3-201ENST00000308580 KRTAP19-1Q8IUB9 90 aa3.78□□□□□ -1.8
TMOD3-201ENST00000308580 HYDINQ4G0P3 5121 aa3.76□□□□□ -1.81
TMOD3-201ENST00000308580 LRP2P98164 4655 aa3.75□□□□□ -1.81
TMOD3-201ENST00000308580 DNAH6Q9C0G6 4158 aa3.73□□□□□ -1.81
TMOD3-201ENST00000308580 CMYA5Q8N3K9 4069 aa3.73□□□□□ -1.81
TMOD3-201ENST00000308580 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
TMOD3-201ENST00000308580 PCLOQ9Y6V0 5065 aa3.7□□□□□ -1.82
TMOD3-201ENST00000308580 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
TMOD3-201ENST00000308580 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
TMOD3-201ENST00000308580 KRTAP10-7P60409 375 aaPredicted RBP3.69□□□□□ -1.82
TMOD3-201ENST00000308580 BIRC6Q9NR09 4857 aa3.69□□□□□ -1.82
TMOD3-201ENST00000308580 FRAS1Q86XX4 4008 aa3.68□□□□□ -1.82
TMOD3-201ENST00000308580 HECTD4Q9Y4D8 3996 aa3.67□□□□□ -1.82
TMOD3-201ENST00000308580 DNAH7Q8WXX0 4024 aa3.64□□□□□ -1.83
TMOD3-201ENST00000308580 MT1XP80297 61 aa3.64□□□□□ -1.83
TMOD3-201ENST00000308580 HERC1Q15751 4861 aa3.63□□□□□ -1.83
TMOD3-201ENST00000308580 MT1BP07438 61 aa3.63□□□□□ -1.83
TMOD3-201ENST00000308580 KRTAP9-8Q9BYQ0 159 aa3.63□□□□□ -1.83
TMOD3-201ENST00000308580 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
TMOD3-201ENST00000308580 PKD1P98161 4303 aa3.6□□□□□ -1.83
TMOD3-201ENST00000308580 HSPG2P98160 4391 aa3.58□□□□□ -1.84
TMOD3-201ENST00000308580 PKHD1P08F94 4074 aa3.57□□□□□ -1.84
TMOD3-201ENST00000308580 KMT2CQ8NEZ4 4911 aaKnown RBP3.56□□□□□ -1.84
TMOD3-201ENST00000308580 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
TMOD3-201ENST00000308580 KRTAP9-3Q9BYQ3 159 aa3.53□□□□□ -1.84
TMOD3-201ENST00000308580 EPPK1P58107 5090 aaKnown RBP3.52□□□□□ -1.85
TMOD3-201ENST00000308580 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
TMOD3-201ENST00000308580 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
TMOD3-201ENST00000308580 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
TMOD3-201ENST00000308580 LPAP08519 4548 aa3.5□□□□□ -1.85
TMOD3-201ENST00000308580 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
TMOD3-201ENST00000308580 MUC17Q685J3 4493 aa3.45□□□□□ -1.86
TMOD3-201ENST00000308580 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
TMOD3-201ENST00000308580 MT1GP13640 62 aa3.43□□□□□ -1.86
TMOD3-201ENST00000308580 SPRR2EP22531 72 aa3.41□□□□□ -1.86
TMOD3-201ENST00000308580 SPRR2BP35325 72 aa3.41□□□□□ -1.86
TMOD3-201ENST00000308580 SPRR2AP35326 72 aa3.41□□□□□ -1.86
TMOD3-201ENST00000308580 LCE3BQ5TA77 95 aa3.4□□□□□ -1.86
TMOD3-201ENST00000308580 LCE2BO14633 110 aa3.39□□□□□ -1.87
TMOD3-201ENST00000308580 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
TMOD3-201ENST00000308580 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
TMOD3-201ENST00000308580 PKHD1L1Q86WI1 4243 aa3.36□□□□□ -1.87
TMOD3-201ENST00000308580 RNF213Q63HN8 5207 aa3.33□□□□□ -1.88
TMOD3-201ENST00000308580 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
TMOD3-201ENST00000308580 KRTAP4-7Q9BYR0 210 aa3.32□□□□□ -1.88
TMOD3-201ENST00000308580 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
TMOD3-201ENST00000308580 TNXBP22105 4242 aa3.32□□□□□ -1.88
TMOD3-201ENST00000308580 FAT4Q6V0I7 4981 aa3.31□□□□□ -1.88
TMOD3-201ENST00000308580 FLGP20930 4061 aaPredicted RBP3.3□□□□□ -1.88
TMOD3-201ENST00000308580 SPRR2DP22532 72 aa3.29□□□□□ -1.88
TMOD3-201ENST00000308580 MT1LQ93083 61 aa3.28□□□□□ -1.88
TMOD3-201ENST00000308580 LCE2DQ5TA82 110 aaPredicted RBP3.27□□□□□ -1.89
TMOD3-201ENST00000308580 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
TMOD3-201ENST00000308580 MT1EP04732 61 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms