RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 AKAP9Q99996 3911 aa8.61□□□□□ -1.03
MTCL1-201ENST00000306329 ZNF469Q96JG9 3925 aaPredicted RBP8.59□□□□□ -1.03
MTCL1-201ENST00000306329 KRTAP10-5P60370 271 aa8.56□□□□□ -1.04
MTCL1-201ENST00000306329 CSMD3Q7Z407 3707 aa8.52□□□□□ -1.04
MTCL1-201ENST00000306329 KRTAP8-1Q8IUC2 63 aa8.44□□□□□ -1.06
MTCL1-201ENST00000306329 DNAH9Q9NYC9 4486 aa8.36□□□□□ -1.07
MTCL1-201ENST00000306329 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
MTCL1-201ENST00000306329 DNAH1Q9P2D7 4330 aa8.25□□□□□ -1.09
MTCL1-201ENST00000306329 DNAH10Q8IVF4 4471 aa8.19□□□□□ -1.1
MTCL1-201ENST00000306329 PLECQ15149 4684 aaKnown RBP8.17□□□□□ -1.1
MTCL1-201ENST00000306329 KRTAP4-1Q9BYQ7 146 aa8.08□□□□□ -1.12
MTCL1-201ENST00000306329 DNAH5Q8TE73 4624 aa8.06□□□□□ -1.12
MTCL1-201ENST00000306329 MT1HP80294 61 aa8.03□□□□□ -1.12
MTCL1-201ENST00000306329 DNAH11Q96DT5 4516 aa8.02□□□□□ -1.13
MTCL1-201ENST00000306329 DNAH17Q9UFH2 4485 aa8.01□□□□□ -1.13
MTCL1-201ENST00000306329 VPS13DQ5THJ4 4388 aa7.99□□□□□ -1.13
MTCL1-201ENST00000306329 MT2AP02795 61 aa7.96□□□□□ -1.14
MTCL1-201ENST00000306329 DNAH3Q8TD57 4116 aa7.93□□□□□ -1.14
MTCL1-201ENST00000306329 SPRR2GQ9BYE4 73 aa7.9□□□□□ -1.14
MTCL1-201ENST00000306329 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
MTCL1-201ENST00000306329 KRTAP19-5Q3LI72 72 aa7.86□□□□□ -1.15
MTCL1-201ENST00000306329 STARD9Q9P2P6 4700 aa7.85□□□□□ -1.15
MTCL1-201ENST00000306329 DNAH8Q96JB1 4490 aa7.83□□□□□ -1.16
MTCL1-201ENST00000306329 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
MTCL1-201ENST00000306329 SPRR2FQ96RM1 72 aa7.81□□□□□ -1.16
MTCL1-201ENST00000306329 MT1FP04733 61 aa7.78□□□□□ -1.16
MTCL1-201ENST00000306329 LCE3CQ5T5A8 94 aa7.76□□□□□ -1.17
MTCL1-201ENST00000306329 ANK2Q01484 3957 aa7.75□□□□□ -1.17
MTCL1-201ENST00000306329 FAT1Q14517 4588 aa7.74□□□□□ -1.17
MTCL1-201ENST00000306329 LRP1BQ9NZR2 4599 aa7.71□□□□□ -1.17
MTCL1-201ENST00000306329 DYNC1H1Q14204 4646 aaKnown RBP7.7□□□□□ -1.18
MTCL1-201ENST00000306329 DYNC2H1Q8NCM8 4307 aaKnown RBP7.66□□□□□ -1.18
MTCL1-201ENST00000306329 KMT2AQ03164 3969 aa7.65□□□□□ -1.18
MTCL1-201ENST00000306329 SACSQ9NZJ4 4579 aa7.64□□□□□ -1.19
MTCL1-201ENST00000306329 DNHD1Q96M86 4753 aa7.6□□□□□ -1.19
MTCL1-201ENST00000306329 FAT2Q9NYQ8 4349 aa7.6□□□□□ -1.19
MTCL1-201ENST00000306329 FRAS1Q86XX4 4008 aa7.59□□□□□ -1.19
MTCL1-201ENST00000306329 CMYA5Q8N3K9 4069 aa7.57□□□□□ -1.2
MTCL1-201ENST00000306329 PRKDCP78527 4128 aaKnown RBP7.56□□□□□ -1.2
MTCL1-201ENST00000306329 VPS13BQ7Z7G8 4022 aa7.54□□□□□ -1.2
MTCL1-201ENST00000306329 LYSTQ99698 3801 aa7.43□□□□□ -1.22
MTCL1-201ENST00000306329 KRTAP19-4Q3LI73 84 aa7.42□□□□□ -1.22
MTCL1-201ENST00000306329 APOBP04114 4563 aaKnown RBP7.37□□□□□ -1.23
MTCL1-201ENST00000306329 SPRR2EP22531 72 aa7.36□□□□□ -1.23
MTCL1-201ENST00000306329 SPRR2BP35325 72 aa7.36□□□□□ -1.23
MTCL1-201ENST00000306329 SPRR2AP35326 72 aa7.36□□□□□ -1.23
MTCL1-201ENST00000306329 HECTD4Q9Y4D8 3996 aa7.36□□□□□ -1.23
MTCL1-201ENST00000306329 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
MTCL1-201ENST00000306329 RYR1P21817 5038 aa7.34□□□□□ -1.23
MTCL1-201ENST00000306329 DNAH6Q9C0G6 4158 aa7.33□□□□□ -1.24
MTCL1-201ENST00000306329 DNAH7Q8WXX0 4024 aa7.3□□□□□ -1.24
MTCL1-201ENST00000306329 KRTAP19-8Q3LI54 63 aa7.26□□□□□ -1.25
MTCL1-201ENST00000306329 KRTAP19-1Q8IUB9 90 aa7.25□□□□□ -1.25
MTCL1-201ENST00000306329 MT1GP13640 62 aa7.2□□□□□ -1.26
MTCL1-201ENST00000306329 KRTAP12-4P60329 112 aa7.18□□□□□ -1.26
MTCL1-201ENST00000306329 MYCBP2O75592 4640 aa7.17□□□□□ -1.26
MTCL1-201ENST00000306329 MT1XP80297 61 aa7.16□□□□□ -1.26
MTCL1-201ENST00000306329 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
MTCL1-201ENST00000306329 SPRR2DP22532 72 aa7.13□□□□□ -1.27
MTCL1-201ENST00000306329 FAT3Q8TDW7 4589 aa7.09□□□□□ -1.27
MTCL1-201ENST00000306329 LRP1Q07954 4544 aaKnown RBP7.07□□□□□ -1.28
MTCL1-201ENST00000306329 RYR3Q15413 4870 aa7.03□□□□□ -1.28
MTCL1-201ENST00000306329 MT1BP07438 61 aa7.02□□□□□ -1.28
MTCL1-201ENST00000306329 LCE2BO14633 110 aa7.02□□□□□ -1.29
MTCL1-201ENST00000306329 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
MTCL1-201ENST00000306329 KRTAP4-8Q9BYQ9 185 aa6.98□□□□□ -1.29
MTCL1-201ENST00000306329 HYDINQ4G0P3 5121 aa6.95□□□□□ -1.3
MTCL1-201ENST00000306329 LCE3DQ9BYE3 92 aa6.91□□□□□ -1.3
MTCL1-201ENST00000306329 KIAA1109Q2LD37 5005 aa6.9□□□□□ -1.31
MTCL1-201ENST00000306329 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
MTCL1-201ENST00000306329 SPRR5A0A1B0GTR4 108 aa6.86□□□□□ -1.31
MTCL1-201ENST00000306329 RYR2Q92736 4967 aa6.86□□□□□ -1.31
MTCL1-201ENST00000306329 PKHD1P08F94 4074 aa6.82□□□□□ -1.32
MTCL1-201ENST00000306329 LCE3EQ5T5B0 92 aa6.8□□□□□ -1.32
MTCL1-201ENST00000306329 HSPG2P98160 4391 aa6.8□□□□□ -1.32
MTCL1-201ENST00000306329 KRTAP9-3Q9BYQ3 159 aa6.75□□□□□ -1.33
MTCL1-201ENST00000306329 PKD1P98161 4303 aa6.73□□□□□ -1.33
MTCL1-201ENST00000306329 HERC1Q15751 4861 aa6.72□□□□□ -1.33
MTCL1-201ENST00000306329 LRP2P98164 4655 aa6.71□□□□□ -1.34
MTCL1-201ENST00000306329 LPAP08519 4548 aa6.67□□□□□ -1.34
MTCL1-201ENST00000306329 LCE2CQ5TA81 110 aa6.65□□□□□ -1.35
MTCL1-201ENST00000306329 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.35
MTCL1-201ENST00000306329 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
MTCL1-201ENST00000306329 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
MTCL1-201ENST00000306329 TNXBP22105 4242 aa6.6□□□□□ -1.35
MTCL1-201ENST00000306329 MT1LQ93083 61 aa6.56□□□□□ -1.36
MTCL1-201ENST00000306329 LCE2DQ5TA82 110 aaPredicted RBP6.53□□□□□ -1.36
MTCL1-201ENST00000306329 KMT2CQ8NEZ4 4911 aaKnown RBP6.51□□□□□ -1.37
MTCL1-201ENST00000306329 HERC2O95714 4834 aa6.48□□□□□ -1.37
MTCL1-201ENST00000306329 MT1EP04732 61 aa6.48□□□□□ -1.37
MTCL1-201ENST00000306329 MT4P47944 62 aa6.36□□□□□ -1.39
MTCL1-201ENST00000306329 PRM1P04553 51 aa6.35□□□□□ -1.39
MTCL1-201ENST00000306329 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
MTCL1-201ENST00000306329 MT3P25713 68 aa6.34□□□□□ -1.4
MTCL1-201ENST00000306329 MT1MQ8N339 61 aa6.32□□□□□ -1.4
MTCL1-201ENST00000306329 PCLOQ9Y6V0 5065 aa6.29□□□□□ -1.4
MTCL1-201ENST00000306329 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
MTCL1-201ENST00000306329 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
MTCL1-201ENST00000306329 FLGP20930 4061 aaPredicted RBP6.22□□□□□ -1.41
MTCL1-201ENST00000306329 LCE1BQ5T7P3 118 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms