RNA–Protein interactions for RNA: ENST00000306052.10

LRP8-201, Transcript of LDL receptor related protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRP8, Length 7,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-201ENST00000306052 KRTAP3-3Q9BYR6 98 aa6.6□□□□□ -1.35
LRP8-201ENST00000306052 ANK2Q01484 3957 aa6.6□□□□□ -1.35
LRP8-201ENST00000306052 PRKDCP78527 4128 aaKnown RBP6.6□□□□□ -1.35
LRP8-201ENST00000306052 DNHD1Q96M86 4753 aa6.6□□□□□ -1.35
LRP8-201ENST00000306052 PLECQ15149 4684 aaKnown RBP6.56□□□□□ -1.36
LRP8-201ENST00000306052 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
LRP8-201ENST00000306052 DNAH5Q8TE73 4624 aa6.49□□□□□ -1.37
LRP8-201ENST00000306052 CMYA5Q8N3K9 4069 aa6.47□□□□□ -1.37
LRP8-201ENST00000306052 KMT2AQ03164 3969 aa6.46□□□□□ -1.37
LRP8-201ENST00000306052 STARD9Q9P2P6 4700 aa6.42□□□□□ -1.38
LRP8-201ENST00000306052 VPS13DQ5THJ4 4388 aa6.42□□□□□ -1.38
LRP8-201ENST00000306052 DNAH10Q8IVF4 4471 aa6.4□□□□□ -1.39
LRP8-201ENST00000306052 DNAH3Q8TD57 4116 aa6.39□□□□□ -1.39
LRP8-201ENST00000306052 DNAH11Q96DT5 4516 aa6.36□□□□□ -1.39
LRP8-201ENST00000306052 FAT2Q9NYQ8 4349 aa6.35□□□□□ -1.39
LRP8-201ENST00000306052 KRTAP10-5P60370 271 aa6.34□□□□□ -1.39
LRP8-201ENST00000306052 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
LRP8-201ENST00000306052 LRP1BQ9NZR2 4599 aa6.3□□□□□ -1.4
LRP8-201ENST00000306052 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
LRP8-201ENST00000306052 DNAH17Q9UFH2 4485 aa6.28□□□□□ -1.4
LRP8-201ENST00000306052 LYSTQ99698 3801 aa6.26□□□□□ -1.41
LRP8-201ENST00000306052 DNAH2Q9P225 4427 aa6.25□□□□□ -1.41
LRP8-201ENST00000306052 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
LRP8-201ENST00000306052 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
LRP8-201ENST00000306052 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
LRP8-201ENST00000306052 DYNC1H1Q14204 4646 aaKnown RBP6.19□□□□□ -1.42
LRP8-201ENST00000306052 KRTAP4-1Q9BYQ7 146 aa6.17□□□□□ -1.42
LRP8-201ENST00000306052 FAT1Q14517 4588 aa6.16□□□□□ -1.42
LRP8-201ENST00000306052 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
LRP8-201ENST00000306052 DNAH6Q9C0G6 4158 aa6.12□□□□□ -1.43
LRP8-201ENST00000306052 MT1HP80294 61 aa6.12□□□□□ -1.43
LRP8-201ENST00000306052 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
LRP8-201ENST00000306052 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
LRP8-201ENST00000306052 FRAS1Q86XX4 4008 aa6.05□□□□□ -1.44
LRP8-201ENST00000306052 RYR1P21817 5038 aa6.04□□□□□ -1.44
LRP8-201ENST00000306052 SACSQ9NZJ4 4579 aa6.01□□□□□ -1.45
LRP8-201ENST00000306052 KRTAP17-1Q9BYP8 105 aa6□□□□□ -1.45
LRP8-201ENST00000306052 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
LRP8-201ENST00000306052 DNAH8Q96JB1 4490 aa5.97□□□□□ -1.45
LRP8-201ENST00000306052 MT2AP02795 61 aa5.9□□□□□ -1.47
LRP8-201ENST00000306052 RYR3Q15413 4870 aa5.87□□□□□ -1.47
LRP8-201ENST00000306052 PKHD1P08F94 4074 aa5.81□□□□□ -1.48
LRP8-201ENST00000306052 HSPG2P98160 4391 aa5.81□□□□□ -1.48
LRP8-201ENST00000306052 MT1FP04733 61 aa5.8□□□□□ -1.48
LRP8-201ENST00000306052 APOBP04114 4563 aaKnown RBP5.8□□□□□ -1.48
LRP8-201ENST00000306052 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
LRP8-201ENST00000306052 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.49
LRP8-201ENST00000306052 HYDINQ4G0P3 5121 aa5.7□□□□□ -1.5
LRP8-201ENST00000306052 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
LRP8-201ENST00000306052 KIAA1109Q2LD37 5005 aa5.69□□□□□ -1.5
LRP8-201ENST00000306052 KRTAP10-7P60409 375 aaPredicted RBP5.67□□□□□ -1.5
LRP8-201ENST00000306052 MYCBP2O75592 4640 aa5.66□□□□□ -1.5
LRP8-201ENST00000306052 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
LRP8-201ENST00000306052 RYR2Q92736 4967 aa5.64□□□□□ -1.51
LRP8-201ENST00000306052 PKHD1L1Q86WI1 4243 aa5.57□□□□□ -1.52
LRP8-201ENST00000306052 PKD1P98161 4303 aa5.56□□□□□ -1.52
LRP8-201ENST00000306052 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
LRP8-201ENST00000306052 HERC2O95714 4834 aa5.55□□□□□ -1.52
LRP8-201ENST00000306052 BIRC6Q9NR09 4857 aa5.54□□□□□ -1.52
LRP8-201ENST00000306052 LPAP08519 4548 aa5.5□□□□□ -1.53
LRP8-201ENST00000306052 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
LRP8-201ENST00000306052 KMT2CQ8NEZ4 4911 aaKnown RBP5.45□□□□□ -1.54
LRP8-201ENST00000306052 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
LRP8-201ENST00000306052 TNXBP22105 4242 aa5.4□□□□□ -1.54
LRP8-201ENST00000306052 SPRR2EP22531 72 aa5.39□□□□□ -1.55
LRP8-201ENST00000306052 SPRR2BP35325 72 aa5.39□□□□□ -1.55
LRP8-201ENST00000306052 SPRR2AP35326 72 aa5.39□□□□□ -1.55
LRP8-201ENST00000306052 LRP2P98164 4655 aa5.38□□□□□ -1.55
LRP8-201ENST00000306052 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
LRP8-201ENST00000306052 LCE2CQ5TA81 110 aa5.35□□□□□ -1.55
LRP8-201ENST00000306052 KRTAP19-1Q8IUB9 90 aa5.35□□□□□ -1.55
LRP8-201ENST00000306052 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
LRP8-201ENST00000306052 PCLOQ9Y6V0 5065 aa5.25□□□□□ -1.57
LRP8-201ENST00000306052 KRTAP9-3Q9BYQ3 159 aa5.24□□□□□ -1.57
LRP8-201ENST00000306052 SPRR2DP22532 72 aa5.21□□□□□ -1.58
LRP8-201ENST00000306052 HERC1Q15751 4861 aa5.21□□□□□ -1.58
LRP8-201ENST00000306052 MT1BP07438 61 aa5.21□□□□□ -1.58
LRP8-201ENST00000306052 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.58
LRP8-201ENST00000306052 MT1XP80297 61 aa5.19□□□□□ -1.58
LRP8-201ENST00000306052 EPPK1P58107 5090 aaKnown RBP5.19□□□□□ -1.58
LRP8-201ENST00000306052 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
LRP8-201ENST00000306052 KRTAP12-4P60329 112 aa5.17□□□□□ -1.58
LRP8-201ENST00000306052 MT1GP13640 62 aa5.17□□□□□ -1.58
LRP8-201ENST00000306052 LCE2BO14633 110 aa5.13□□□□□ -1.59
LRP8-201ENST00000306052 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
LRP8-201ENST00000306052 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
LRP8-201ENST00000306052 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
LRP8-201ENST00000306052 KRTAP19-2Q3LHN2 52 aa5.07□□□□□ -1.6
LRP8-201ENST00000306052 KRTAP9-6A0A140TA67 174 aa4.96□□□□□ -1.61
LRP8-201ENST00000306052 MUC17Q685J3 4493 aa4.96□□□□□ -1.62
LRP8-201ENST00000306052 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
LRP8-201ENST00000306052 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
LRP8-201ENST00000306052 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
LRP8-201ENST00000306052 LCE2AQ5TA79 106 aaPredicted RBP4.91□□□□□ -1.62
LRP8-201ENST00000306052 LCE2DQ5TA82 110 aaPredicted RBP4.9□□□□□ -1.62
LRP8-201ENST00000306052 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
LRP8-201ENST00000306052 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
LRP8-201ENST00000306052 LCE3EQ5T5B0 92 aa4.79□□□□□ -1.64
LRP8-201ENST00000306052 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
LRP8-201ENST00000306052 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms