RNA–Protein interactions for RNA: ENST00000303230.5

HCN1-201, Transcript of hyperpolarization activated cyclic nucleotide gated potassium channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCN1, Length 9,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1-201ENST00000303230 DNAH7Q8WXX0 4024 aa7.21□□□□□ -1.26
HCN1-201ENST00000303230 MT1HL1P0DM35 61 aa7.16□□□□□ -1.26
HCN1-201ENST00000303230 LCE3AQ5TA76 89 aa7.12□□□□□ -1.27
HCN1-201ENST00000303230 ANK2Q01484 3957 aa7.08□□□□□ -1.28
HCN1-201ENST00000303230 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
HCN1-201ENST00000303230 KRTAP19-4Q3LI73 84 aa7.02□□□□□ -1.29
HCN1-201ENST00000303230 CRCT1Q9UGL9 99 aa6.88□□□□□ -1.31
HCN1-201ENST00000303230 DNAH2Q9P225 4427 aa6.86□□□□□ -1.31
HCN1-201ENST00000303230 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
HCN1-201ENST00000303230 DNAH1Q9P2D7 4330 aa6.8□□□□□ -1.32
HCN1-201ENST00000303230 HUWE1Q7Z6Z7 4374 aaKnown RBP6.78□□□□□ -1.32
HCN1-201ENST00000303230 DNAH6Q9C0G6 4158 aa6.78□□□□□ -1.32
HCN1-201ENST00000303230 VPS13BQ7Z7G8 4022 aa6.76□□□□□ -1.33
HCN1-201ENST00000303230 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
HCN1-201ENST00000303230 SPRR2GQ9BYE4 73 aa6.7□□□□□ -1.34
HCN1-201ENST00000303230 KRTAP8-1Q8IUC2 63 aa6.7□□□□□ -1.34
HCN1-201ENST00000303230 ANK3Q12955 4377 aaKnown RBP6.68□□□□□ -1.34
HCN1-201ENST00000303230 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
HCN1-201ENST00000303230 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
HCN1-201ENST00000303230 DNAH10Q8IVF4 4471 aa6.48□□□□□ -1.37
HCN1-201ENST00000303230 FLGP20930 4061 aaPredicted RBP6.39□□□□□ -1.39
HCN1-201ENST00000303230 FRAS1Q86XX4 4008 aa6.39□□□□□ -1.39
HCN1-201ENST00000303230 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
HCN1-201ENST00000303230 PRKDCP78527 4128 aaKnown RBP6.33□□□□□ -1.4
HCN1-201ENST00000303230 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
HCN1-201ENST00000303230 KRTAP4-5Q9BYR2 181 aa6.32□□□□□ -1.4
HCN1-201ENST00000303230 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
HCN1-201ENST00000303230 MT1HP80294 61 aa6.24□□□□□ -1.41
HCN1-201ENST00000303230 MT2AP02795 61 aa6.23□□□□□ -1.41
HCN1-201ENST00000303230 KRTAP4-1Q9BYQ7 146 aa6.12□□□□□ -1.43
HCN1-201ENST00000303230 DNAH11Q96DT5 4516 aa6.11□□□□□ -1.43
HCN1-201ENST00000303230 FAT2Q9NYQ8 4349 aa6.09□□□□□ -1.43
HCN1-201ENST00000303230 DYNC2H1Q8NCM8 4307 aaKnown RBP6.07□□□□□ -1.44
HCN1-201ENST00000303230 MT1FP04733 61 aa6.04□□□□□ -1.44
HCN1-201ENST00000303230 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
HCN1-201ENST00000303230 KRTAP12-4P60329 112 aa6.02□□□□□ -1.45
HCN1-201ENST00000303230 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
HCN1-201ENST00000303230 PKHD1P08F94 4074 aa6.01□□□□□ -1.45
HCN1-201ENST00000303230 VPS13DQ5THJ4 4388 aa6.01□□□□□ -1.45
HCN1-201ENST00000303230 DNAH9Q9NYC9 4486 aa5.96□□□□□ -1.46
HCN1-201ENST00000303230 DNAH17Q9UFH2 4485 aa5.91□□□□□ -1.46
HCN1-201ENST00000303230 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
HCN1-201ENST00000303230 STARD9Q9P2P6 4700 aa5.88□□□□□ -1.47
HCN1-201ENST00000303230 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
HCN1-201ENST00000303230 MT1XP80297 61 aa5.84□□□□□ -1.47
HCN1-201ENST00000303230 DNAH5Q8TE73 4624 aa5.83□□□□□ -1.48
HCN1-201ENST00000303230 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
HCN1-201ENST00000303230 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
HCN1-201ENST00000303230 PKHD1L1Q86WI1 4243 aa5.78□□□□□ -1.48
HCN1-201ENST00000303230 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
HCN1-201ENST00000303230 LCE3EQ5T5B0 92 aa5.71□□□□□ -1.49
HCN1-201ENST00000303230 PLECQ15149 4684 aaKnown RBP5.71□□□□□ -1.49
HCN1-201ENST00000303230 MT1GP13640 62 aa5.7□□□□□ -1.5
HCN1-201ENST00000303230 DYNC1H1Q14204 4646 aaKnown RBP5.61□□□□□ -1.51
HCN1-201ENST00000303230 MT1LQ93083 61 aa5.58□□□□□ -1.52
HCN1-201ENST00000303230 MT3P25713 68 aa5.56□□□□□ -1.52
HCN1-201ENST00000303230 LCE2BO14633 110 aa5.55□□□□□ -1.52
HCN1-201ENST00000303230 HSPG2P98160 4391 aa5.54□□□□□ -1.52
HCN1-201ENST00000303230 SPRR2EP22531 72 aa5.52□□□□□ -1.53
HCN1-201ENST00000303230 SPRR2BP35325 72 aa5.52□□□□□ -1.53
HCN1-201ENST00000303230 SPRR2AP35326 72 aa5.52□□□□□ -1.53
HCN1-201ENST00000303230 PKD1P98161 4303 aa5.51□□□□□ -1.53
HCN1-201ENST00000303230 MT1BP07438 61 aa5.51□□□□□ -1.53
HCN1-201ENST00000303230 APOBP04114 4563 aaKnown RBP5.44□□□□□ -1.54
HCN1-201ENST00000303230 RYR1P21817 5038 aa5.42□□□□□ -1.54
HCN1-201ENST00000303230 SPRR2DP22532 72 aa5.42□□□□□ -1.54
HCN1-201ENST00000303230 KRTAP9-8Q9BYQ0 159 aa5.42□□□□□ -1.54
HCN1-201ENST00000303230 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.54
HCN1-201ENST00000303230 LRP1BQ9NZR2 4599 aa5.39□□□□□ -1.55
HCN1-201ENST00000303230 MT1EP04732 61 aa5.34□□□□□ -1.55
HCN1-201ENST00000303230 KRTAP9-3Q9BYQ3 159 aa5.33□□□□□ -1.56
HCN1-201ENST00000303230 SACSQ9NZJ4 4579 aa5.32□□□□□ -1.56
HCN1-201ENST00000303230 TNXBP22105 4242 aa5.31□□□□□ -1.56
HCN1-201ENST00000303230 FAT1Q14517 4588 aa5.26□□□□□ -1.57
HCN1-201ENST00000303230 PRM1P04553 51 aa5.24□□□□□ -1.57
HCN1-201ENST00000303230 MYCBP2O75592 4640 aa5.17□□□□□ -1.58
HCN1-201ENST00000303230 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
HCN1-201ENST00000303230 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
HCN1-201ENST00000303230 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.58
HCN1-201ENST00000303230 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.58
HCN1-201ENST00000303230 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.58
HCN1-201ENST00000303230 LCE2CQ5TA81 110 aa5.15□□□□□ -1.58
HCN1-201ENST00000303230 MT1MQ8N339 61 aa5.12□□□□□ -1.59
HCN1-201ENST00000303230 MT1AP04731 61 aa5.02□□□□□ -1.61
HCN1-201ENST00000303230 RYR3Q15413 4870 aa4.99□□□□□ -1.61
HCN1-201ENST00000303230 FAT3Q8TDW7 4589 aa4.97□□□□□ -1.61
HCN1-201ENST00000303230 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
HCN1-201ENST00000303230 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
HCN1-201ENST00000303230 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
HCN1-201ENST00000303230 LCE2DQ5TA82 110 aaPredicted RBP4.89□□□□□ -1.63
HCN1-201ENST00000303230 DNHD1Q96M86 4753 aa4.89□□□□□ -1.63
HCN1-201ENST00000303230 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
HCN1-201ENST00000303230 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
HCN1-201ENST00000303230 LRP2P98164 4655 aa4.83□□□□□ -1.64
HCN1-201ENST00000303230 KRTAP17-1Q9BYP8 105 aa4.77□□□□□ -1.65
HCN1-201ENST00000303230 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
HCN1-201ENST00000303230 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
HCN1-201ENST00000303230 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
HCN1-201ENST00000303230 KMT2CQ8NEZ4 4911 aaKnown RBP4.68□□□□□ -1.66
HCN1-201ENST00000303230 MT4P47944 62 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms