RNA–Protein interactions for RNA: ENST00000298307.9

KLHDC2-201, Transcript of kelch domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHDC2, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC2-201ENST00000298307 ALMS1Q8TCU4 4167 aa8.4□□□□□ -1.06
KLHDC2-201ENST00000298307 DNAH1Q9P2D7 4330 aa8.38□□□□□ -1.07
KLHDC2-201ENST00000298307 ZNF469Q96JG9 3925 aaPredicted RBP8.36□□□□□ -1.07
KLHDC2-201ENST00000298307 DNAH9Q9NYC9 4486 aa8.35□□□□□ -1.07
KLHDC2-201ENST00000298307 DNAH10Q8IVF4 4471 aa8.31□□□□□ -1.08
KLHDC2-201ENST00000298307 DNAH5Q8TE73 4624 aa8.28□□□□□ -1.08
KLHDC2-201ENST00000298307 DNAH11Q96DT5 4516 aa8.27□□□□□ -1.09
KLHDC2-201ENST00000298307 KRTAP4-5Q9BYR2 181 aa8.25□□□□□ -1.09
KLHDC2-201ENST00000298307 PLECQ15149 4684 aaKnown RBP8.25□□□□□ -1.09
KLHDC2-201ENST00000298307 DNAH17Q9UFH2 4485 aa8.21□□□□□ -1.1
KLHDC2-201ENST00000298307 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
KLHDC2-201ENST00000298307 CRCT1Q9UGL9 99 aa8.13□□□□□ -1.11
KLHDC2-201ENST00000298307 DNAH8Q96JB1 4490 aa8.1□□□□□ -1.11
KLHDC2-201ENST00000298307 VPS13DQ5THJ4 4388 aa8.09□□□□□ -1.11
KLHDC2-201ENST00000298307 KRTAP4-1Q9BYQ7 146 aa7.99□□□□□ -1.13
KLHDC2-201ENST00000298307 DNAH3Q8TD57 4116 aa7.94□□□□□ -1.14
KLHDC2-201ENST00000298307 FAT1Q14517 4588 aa7.91□□□□□ -1.14
KLHDC2-201ENST00000298307 LRP1BQ9NZR2 4599 aa7.87□□□□□ -1.15
KLHDC2-201ENST00000298307 SACSQ9NZJ4 4579 aa7.86□□□□□ -1.15
KLHDC2-201ENST00000298307 DYNC1H1Q14204 4646 aaKnown RBP7.84□□□□□ -1.15
KLHDC2-201ENST00000298307 STARD9Q9P2P6 4700 aa7.82□□□□□ -1.16
KLHDC2-201ENST00000298307 ANK2Q01484 3957 aa7.81□□□□□ -1.16
KLHDC2-201ENST00000298307 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
KLHDC2-201ENST00000298307 SPRR2GQ9BYE4 73 aa7.79□□□□□ -1.16
KLHDC2-201ENST00000298307 DYNC2H1Q8NCM8 4307 aaKnown RBP7.75□□□□□ -1.17
KLHDC2-201ENST00000298307 KRTAP8-1Q8IUC2 63 aa7.65□□□□□ -1.19
KLHDC2-201ENST00000298307 MT2AP02795 61 aa7.63□□□□□ -1.19
KLHDC2-201ENST00000298307 APOBP04114 4563 aaKnown RBP7.63□□□□□ -1.19
KLHDC2-201ENST00000298307 FAT2Q9NYQ8 4349 aa7.62□□□□□ -1.19
KLHDC2-201ENST00000298307 MT1HP80294 61 aa7.62□□□□□ -1.19
KLHDC2-201ENST00000298307 VPS13BQ7Z7G8 4022 aa7.61□□□□□ -1.19
KLHDC2-201ENST00000298307 FRAS1Q86XX4 4008 aa7.58□□□□□ -1.2
KLHDC2-201ENST00000298307 KMT2AQ03164 3969 aa7.55□□□□□ -1.2
KLHDC2-201ENST00000298307 LCE3CQ5T5A8 94 aa7.54□□□□□ -1.2
KLHDC2-201ENST00000298307 DNHD1Q96M86 4753 aa7.52□□□□□ -1.2
KLHDC2-201ENST00000298307 KRTAP19-5Q3LI72 72 aa7.52□□□□□ -1.21
KLHDC2-201ENST00000298307 MT1FP04733 61 aa7.51□□□□□ -1.21
KLHDC2-201ENST00000298307 RYR1P21817 5038 aa7.49□□□□□ -1.21
KLHDC2-201ENST00000298307 MYCBP2O75592 4640 aa7.46□□□□□ -1.21
KLHDC2-201ENST00000298307 SPRR5A0A1B0GTR4 108 aa7.45□□□□□ -1.22
KLHDC2-201ENST00000298307 PRKDCP78527 4128 aaKnown RBP7.37□□□□□ -1.23
KLHDC2-201ENST00000298307 LYSTQ99698 3801 aa7.36□□□□□ -1.23
KLHDC2-201ENST00000298307 HECTD4Q9Y4D8 3996 aa7.34□□□□□ -1.23
KLHDC2-201ENST00000298307 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
KLHDC2-201ENST00000298307 CMYA5Q8N3K9 4069 aa7.29□□□□□ -1.24
KLHDC2-201ENST00000298307 DNAH6Q9C0G6 4158 aa7.27□□□□□ -1.25
KLHDC2-201ENST00000298307 FAT3Q8TDW7 4589 aa7.26□□□□□ -1.25
KLHDC2-201ENST00000298307 KRTAP10-7P60409 375 aaPredicted RBP7.26□□□□□ -1.25
KLHDC2-201ENST00000298307 DNAH7Q8WXX0 4024 aa7.23□□□□□ -1.25
KLHDC2-201ENST00000298307 KRTAP19-8Q3LI54 63 aa7.2□□□□□ -1.26
KLHDC2-201ENST00000298307 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
KLHDC2-201ENST00000298307 KRTAP19-4Q3LI73 84 aa7.17□□□□□ -1.26
KLHDC2-201ENST00000298307 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
KLHDC2-201ENST00000298307 MT1XP80297 61 aa7.13□□□□□ -1.27
KLHDC2-201ENST00000298307 RYR3Q15413 4870 aa7.09□□□□□ -1.27
KLHDC2-201ENST00000298307 KIAA1109Q2LD37 5005 aa7.01□□□□□ -1.29
KLHDC2-201ENST00000298307 MT1BP07438 61 aa6.99□□□□□ -1.29
KLHDC2-201ENST00000298307 RYR2Q92736 4967 aa6.96□□□□□ -1.3
KLHDC2-201ENST00000298307 KRTAP12-4P60329 112 aa6.95□□□□□ -1.3
KLHDC2-201ENST00000298307 LRP2P98164 4655 aa6.92□□□□□ -1.3
KLHDC2-201ENST00000298307 SPRR2FQ96RM1 72 aa6.9□□□□□ -1.3
KLHDC2-201ENST00000298307 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.32
KLHDC2-201ENST00000298307 LCE3BQ5TA77 95 aa6.81□□□□□ -1.32
KLHDC2-201ENST00000298307 HYDINQ4G0P3 5121 aa6.77□□□□□ -1.33
KLHDC2-201ENST00000298307 MT1GP13640 62 aa6.77□□□□□ -1.33
KLHDC2-201ENST00000298307 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
KLHDC2-201ENST00000298307 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
KLHDC2-201ENST00000298307 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
KLHDC2-201ENST00000298307 HSPG2P98160 4391 aa6.7□□□□□ -1.34
KLHDC2-201ENST00000298307 PKHD1P08F94 4074 aa6.68□□□□□ -1.34
KLHDC2-201ENST00000298307 PKD1P98161 4303 aa6.67□□□□□ -1.34
KLHDC2-201ENST00000298307 PKHD1L1Q86WI1 4243 aa6.66□□□□□ -1.34
KLHDC2-201ENST00000298307 KRTAP9-3Q9BYQ3 159 aa6.64□□□□□ -1.35
KLHDC2-201ENST00000298307 LPAP08519 4548 aa6.62□□□□□ -1.35
KLHDC2-201ENST00000298307 KRTAP19-2Q3LHN2 52 aa6.62□□□□□ -1.35
KLHDC2-201ENST00000298307 KMT2CQ8NEZ4 4911 aaKnown RBP6.58□□□□□ -1.36
KLHDC2-201ENST00000298307 KRTAP4-7Q9BYR0 210 aa6.56□□□□□ -1.36
KLHDC2-201ENST00000298307 HERC1Q15751 4861 aa6.55□□□□□ -1.36
KLHDC2-201ENST00000298307 TNXBP22105 4242 aa6.52□□□□□ -1.37
KLHDC2-201ENST00000298307 LCE3DQ9BYE3 92 aa6.52□□□□□ -1.37
KLHDC2-201ENST00000298307 HERC2O95714 4834 aa6.51□□□□□ -1.37
KLHDC2-201ENST00000298307 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
KLHDC2-201ENST00000298307 SPRR2EP22531 72 aa6.46□□□□□ -1.38
KLHDC2-201ENST00000298307 SPRR2BP35325 72 aa6.46□□□□□ -1.38
KLHDC2-201ENST00000298307 SPRR2AP35326 72 aa6.46□□□□□ -1.38
KLHDC2-201ENST00000298307 LCE3EQ5T5B0 92 aa6.45□□□□□ -1.38
KLHDC2-201ENST00000298307 MT1LQ93083 61 aa6.45□□□□□ -1.38
KLHDC2-201ENST00000298307 FLGP20930 4061 aaPredicted RBP6.4□□□□□ -1.39
KLHDC2-201ENST00000298307 MT1EP04732 61 aa6.34□□□□□ -1.39
KLHDC2-201ENST00000298307 LCE2BO14633 110 aa6.28□□□□□ -1.4
KLHDC2-201ENST00000298307 KRTAP19-3Q7Z4W3 81 aa6.28□□□□□ -1.4
KLHDC2-201ENST00000298307 PCLOQ9Y6V0 5065 aa6.26□□□□□ -1.41
KLHDC2-201ENST00000298307 SPRR2DP22532 72 aa6.25□□□□□ -1.41
KLHDC2-201ENST00000298307 PRM1P04553 51 aa6.15□□□□□ -1.43
KLHDC2-201ENST00000298307 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
KLHDC2-201ENST00000298307 KRTAP2-3P0C7H8 128 aa6.12□□□□□ -1.43
KLHDC2-201ENST00000298307 KRTAP2-4Q9BYR9 128 aa6.12□□□□□ -1.43
KLHDC2-201ENST00000298307 KRTAP2-1Q9BYU5 128 aa6.12□□□□□ -1.43
KLHDC2-201ENST00000298307 MT1MQ8N339 61 aa6.09□□□□□ -1.43
KLHDC2-201ENST00000298307 BIRC6Q9NR09 4857 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms