RNA–Protein interactions for RNA: ENST00000282928.4

ZIC1-201, Transcript of Zic family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC1, Length 5,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1-201ENST00000282928 CSMD3Q7Z407 3707 aa7.8□□□□□ -1.16
ZIC1-201ENST00000282928 DNHD1Q96M86 4753 aa7.8□□□□□ -1.16
ZIC1-201ENST00000282928 DNAH11Q96DT5 4516 aa7.75□□□□□ -1.17
ZIC1-201ENST00000282928 INE1O15225 51 aa7.74□□□□□ -1.17
ZIC1-201ENST00000282928 DNAH9Q9NYC9 4486 aa7.74□□□□□ -1.17
ZIC1-201ENST00000282928 KRTAP12-3P60328 96 aa7.74□□□□□ -1.17
ZIC1-201ENST00000282928 DNAH2Q9P225 4427 aa7.71□□□□□ -1.18
ZIC1-201ENST00000282928 LYSTQ99698 3801 aa7.69□□□□□ -1.18
ZIC1-201ENST00000282928 ANK2Q01484 3957 aa7.63□□□□□ -1.19
ZIC1-201ENST00000282928 DNAH5Q8TE73 4624 aa7.59□□□□□ -1.2
ZIC1-201ENST00000282928 MT1HP80294 61 aa7.58□□□□□ -1.2
ZIC1-201ENST00000282928 KRTAP19-4Q3LI73 84 aa7.58□□□□□ -1.2
ZIC1-201ENST00000282928 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
ZIC1-201ENST00000282928 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
ZIC1-201ENST00000282928 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
ZIC1-201ENST00000282928 PLECQ15149 4684 aaKnown RBP7.44□□□□□ -1.22
ZIC1-201ENST00000282928 MT2AP02795 61 aa7.44□□□□□ -1.22
ZIC1-201ENST00000282928 VPS13DQ5THJ4 4388 aa7.44□□□□□ -1.22
ZIC1-201ENST00000282928 KRTAP4-1Q9BYQ7 146 aa7.43□□□□□ -1.22
ZIC1-201ENST00000282928 DNAH17Q9UFH2 4485 aa7.4□□□□□ -1.22
ZIC1-201ENST00000282928 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
ZIC1-201ENST00000282928 DYNC1H1Q14204 4646 aaKnown RBP7.37□□□□□ -1.23
ZIC1-201ENST00000282928 CMYA5Q8N3K9 4069 aa7.28□□□□□ -1.24
ZIC1-201ENST00000282928 DYNC2H1Q8NCM8 4307 aaKnown RBP7.23□□□□□ -1.25
ZIC1-201ENST00000282928 CRCT1Q9UGL9 99 aa7.23□□□□□ -1.25
ZIC1-201ENST00000282928 PRKDCP78527 4128 aaKnown RBP7.21□□□□□ -1.25
ZIC1-201ENST00000282928 RYR1P21817 5038 aa7.21□□□□□ -1.26
ZIC1-201ENST00000282928 STARD9Q9P2P6 4700 aa7.2□□□□□ -1.26
ZIC1-201ENST00000282928 LRP1BQ9NZR2 4599 aa7.19□□□□□ -1.26
ZIC1-201ENST00000282928 MT1FP04733 61 aa7.18□□□□□ -1.26
ZIC1-201ENST00000282928 DNAH6Q9C0G6 4158 aa7.18□□□□□ -1.26
ZIC1-201ENST00000282928 FAT1Q14517 4588 aa7.16□□□□□ -1.26
ZIC1-201ENST00000282928 FAT2Q9NYQ8 4349 aa7.16□□□□□ -1.26
ZIC1-201ENST00000282928 SACSQ9NZJ4 4579 aa7.12□□□□□ -1.27
ZIC1-201ENST00000282928 DNAH3Q8TD57 4116 aa7.12□□□□□ -1.27
ZIC1-201ENST00000282928 DNAH7Q8WXX0 4024 aa7.11□□□□□ -1.27
ZIC1-201ENST00000282928 KRTAP19-8Q3LI54 63 aa7.11□□□□□ -1.27
ZIC1-201ENST00000282928 HERC1Q15751 4861 aa7.1□□□□□ -1.27
ZIC1-201ENST00000282928 DNAH8Q96JB1 4490 aa7.08□□□□□ -1.28
ZIC1-201ENST00000282928 FRAS1Q86XX4 4008 aa7.05□□□□□ -1.28
ZIC1-201ENST00000282928 KIAA1109Q2LD37 5005 aa7.03□□□□□ -1.28
ZIC1-201ENST00000282928 HSPG2P98160 4391 aa6.99□□□□□ -1.29
ZIC1-201ENST00000282928 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
ZIC1-201ENST00000282928 RYR3Q15413 4870 aa6.96□□□□□ -1.3
ZIC1-201ENST00000282928 SPRR2FQ96RM1 72 aa6.93□□□□□ -1.3
ZIC1-201ENST00000282928 RYR2Q92736 4967 aa6.89□□□□□ -1.31
ZIC1-201ENST00000282928 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
ZIC1-201ENST00000282928 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
ZIC1-201ENST00000282928 MYCBP2O75592 4640 aa6.86□□□□□ -1.31
ZIC1-201ENST00000282928 KMT2AQ03164 3969 aa6.83□□□□□ -1.32
ZIC1-201ENST00000282928 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
ZIC1-201ENST00000282928 KRTAP19-1Q8IUB9 90 aa6.8□□□□□ -1.32
ZIC1-201ENST00000282928 LCE3CQ5T5A8 94 aa6.8□□□□□ -1.32
ZIC1-201ENST00000282928 HECTD4Q9Y4D8 3996 aa6.77□□□□□ -1.33
ZIC1-201ENST00000282928 LRP1Q07954 4544 aaKnown RBP6.77□□□□□ -1.33
ZIC1-201ENST00000282928 APOBP04114 4563 aaKnown RBP6.76□□□□□ -1.33
ZIC1-201ENST00000282928 VPS13BQ7Z7G8 4022 aa6.76□□□□□ -1.33
ZIC1-201ENST00000282928 FAT3Q8TDW7 4589 aa6.75□□□□□ -1.33
ZIC1-201ENST00000282928 BIRC6Q9NR09 4857 aa6.74□□□□□ -1.33
ZIC1-201ENST00000282928 HERC2O95714 4834 aa6.69□□□□□ -1.34
ZIC1-201ENST00000282928 KRTAP9-8Q9BYQ0 159 aa6.68□□□□□ -1.34
ZIC1-201ENST00000282928 SPRR2EP22531 72 aa6.61□□□□□ -1.35
ZIC1-201ENST00000282928 SPRR2BP35325 72 aa6.61□□□□□ -1.35
ZIC1-201ENST00000282928 SPRR2AP35326 72 aa6.61□□□□□ -1.35
ZIC1-201ENST00000282928 MT1BP07438 61 aa6.61□□□□□ -1.35
ZIC1-201ENST00000282928 MT1XP80297 61 aa6.59□□□□□ -1.35
ZIC1-201ENST00000282928 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
ZIC1-201ENST00000282928 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.36
ZIC1-201ENST00000282928 MT1GP13640 62 aa6.52□□□□□ -1.37
ZIC1-201ENST00000282928 PKHD1L1Q86WI1 4243 aa6.48□□□□□ -1.37
ZIC1-201ENST00000282928 LCE2BO14633 110 aa6.46□□□□□ -1.38
ZIC1-201ENST00000282928 SPRR2DP22532 72 aa6.46□□□□□ -1.38
ZIC1-201ENST00000282928 PCLOQ9Y6V0 5065 aa6.41□□□□□ -1.38
ZIC1-201ENST00000282928 HYDINQ4G0P3 5121 aa6.4□□□□□ -1.38
ZIC1-201ENST00000282928 KRTAP12-4P60329 112 aa6.38□□□□□ -1.39
ZIC1-201ENST00000282928 PKD1P98161 4303 aa6.37□□□□□ -1.39
ZIC1-201ENST00000282928 PKHD1P08F94 4074 aa6.36□□□□□ -1.39
ZIC1-201ENST00000282928 LCE2DQ5TA82 110 aaPredicted RBP6.3□□□□□ -1.4
ZIC1-201ENST00000282928 KMT2CQ8NEZ4 4911 aaKnown RBP6.29□□□□□ -1.4
ZIC1-201ENST00000282928 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
ZIC1-201ENST00000282928 LRP2P98164 4655 aa6.28□□□□□ -1.4
ZIC1-201ENST00000282928 KRTAP19-6Q3LI70 58 aa6.24□□□□□ -1.41
ZIC1-201ENST00000282928 KRTAP19-3Q7Z4W3 81 aa6.2□□□□□ -1.42
ZIC1-201ENST00000282928 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
ZIC1-201ENST00000282928 MT1LQ93083 61 aa6.12□□□□□ -1.43
ZIC1-201ENST00000282928 EPPK1P58107 5090 aaKnown RBP6.08□□□□□ -1.44
ZIC1-201ENST00000282928 MUC17Q685J3 4493 aa6.05□□□□□ -1.44
ZIC1-201ENST00000282928 ABCA13Q86UQ4 5058 aa6.04□□□□□ -1.44
ZIC1-201ENST00000282928 LCE2AQ5TA79 106 aaPredicted RBP6.03□□□□□ -1.44
ZIC1-201ENST00000282928 MT1EP04732 61 aa6.03□□□□□ -1.44
ZIC1-201ENST00000282928 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
ZIC1-201ENST00000282928 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
ZIC1-201ENST00000282928 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
ZIC1-201ENST00000282928 LCE3BQ5TA77 95 aa5.97□□□□□ -1.45
ZIC1-201ENST00000282928 LPAP08519 4548 aa5.96□□□□□ -1.46
ZIC1-201ENST00000282928 TNXBP22105 4242 aa5.95□□□□□ -1.46
ZIC1-201ENST00000282928 LCE3DQ9BYE3 92 aa5.87□□□□□ -1.47
ZIC1-201ENST00000282928 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
ZIC1-201ENST00000282928 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
ZIC1-201ENST00000282928 MT1MQ8N339 61 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms