RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 KRTAP12-3P60328 96 aa8.35□□□□□ -1.07
FAM20B-201ENST00000263733 CRCT1Q9UGL9 99 aa8.33□□□□□ -1.08
FAM20B-201ENST00000263733 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
FAM20B-201ENST00000263733 DNAH1Q9P2D7 4330 aa8.29□□□□□ -1.08
FAM20B-201ENST00000263733 DNAH5Q8TE73 4624 aa8.29□□□□□ -1.08
FAM20B-201ENST00000263733 DNAH10Q8IVF4 4471 aa8.27□□□□□ -1.09
FAM20B-201ENST00000263733 DNAH11Q96DT5 4516 aa8.24□□□□□ -1.09
FAM20B-201ENST00000263733 PLECQ15149 4684 aaKnown RBP8.22□□□□□ -1.09
FAM20B-201ENST00000263733 KRTAP23-1A1A580 65 aa8.22□□□□□ -1.09
FAM20B-201ENST00000263733 ALMS1Q8TCU4 4167 aa8.1□□□□□ -1.11
FAM20B-201ENST00000263733 DNAH2Q9P225 4427 aa8.07□□□□□ -1.12
FAM20B-201ENST00000263733 DNAH17Q9UFH2 4485 aa7.99□□□□□ -1.13
FAM20B-201ENST00000263733 DNAH8Q96JB1 4490 aa7.99□□□□□ -1.13
FAM20B-201ENST00000263733 KRTAP4-1Q9BYQ7 146 aa7.98□□□□□ -1.13
FAM20B-201ENST00000263733 FAT1Q14517 4588 aa7.98□□□□□ -1.13
FAM20B-201ENST00000263733 VPS13DQ5THJ4 4388 aa7.93□□□□□ -1.14
FAM20B-201ENST00000263733 LRP1BQ9NZR2 4599 aa7.82□□□□□ -1.16
FAM20B-201ENST00000263733 STARD9Q9P2P6 4700 aa7.82□□□□□ -1.16
FAM20B-201ENST00000263733 DYNC1H1Q14204 4646 aaKnown RBP7.82□□□□□ -1.16
FAM20B-201ENST00000263733 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
FAM20B-201ENST00000263733 ANK2Q01484 3957 aa7.79□□□□□ -1.16
FAM20B-201ENST00000263733 DNHD1Q96M86 4753 aa7.78□□□□□ -1.16
FAM20B-201ENST00000263733 DNAH3Q8TD57 4116 aa7.72□□□□□ -1.17
FAM20B-201ENST00000263733 SACSQ9NZJ4 4579 aa7.7□□□□□ -1.18
FAM20B-201ENST00000263733 KMT2AQ03164 3969 aa7.64□□□□□ -1.19
FAM20B-201ENST00000263733 RYR1P21817 5038 aa7.62□□□□□ -1.19
FAM20B-201ENST00000263733 MT1HP80294 61 aa7.62□□□□□ -1.19
FAM20B-201ENST00000263733 MYCBP2O75592 4640 aa7.6□□□□□ -1.19
FAM20B-201ENST00000263733 SPRR2GQ9BYE4 73 aa7.6□□□□□ -1.19
FAM20B-201ENST00000263733 APOBP04114 4563 aaKnown RBP7.6□□□□□ -1.19
FAM20B-201ENST00000263733 KRTAP8-1Q8IUC2 63 aa7.59□□□□□ -1.19
FAM20B-201ENST00000263733 VPS13BQ7Z7G8 4022 aa7.59□□□□□ -1.19
FAM20B-201ENST00000263733 MT2AP02795 61 aa7.59□□□□□ -1.19
FAM20B-201ENST00000263733 FRAS1Q86XX4 4008 aa7.59□□□□□ -1.19
FAM20B-201ENST00000263733 DYNC2H1Q8NCM8 4307 aaKnown RBP7.59□□□□□ -1.2
FAM20B-201ENST00000263733 LYSTQ99698 3801 aa7.58□□□□□ -1.2
FAM20B-201ENST00000263733 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
FAM20B-201ENST00000263733 PRKDCP78527 4128 aaKnown RBP7.49□□□□□ -1.21
FAM20B-201ENST00000263733 MT1FP04733 61 aa7.49□□□□□ -1.21
FAM20B-201ENST00000263733 KRTAP19-5Q3LI72 72 aa7.45□□□□□ -1.22
FAM20B-201ENST00000263733 LCE3CQ5T5A8 94 aa7.35□□□□□ -1.23
FAM20B-201ENST00000263733 DNAH6Q9C0G6 4158 aa7.3□□□□□ -1.24
FAM20B-201ENST00000263733 LRP1Q07954 4544 aaKnown RBP7.27□□□□□ -1.24
FAM20B-201ENST00000263733 FAT3Q8TDW7 4589 aa7.26□□□□□ -1.25
FAM20B-201ENST00000263733 KRTAP17-1Q9BYP8 105 aa7.22□□□□□ -1.25
FAM20B-201ENST00000263733 CMYA5Q8N3K9 4069 aa7.21□□□□□ -1.25
FAM20B-201ENST00000263733 HECTD4Q9Y4D8 3996 aa7.21□□□□□ -1.26
FAM20B-201ENST00000263733 KRTAP10-7P60409 375 aaPredicted RBP7.21□□□□□ -1.26
FAM20B-201ENST00000263733 KRTAP19-1Q8IUB9 90 aa7.19□□□□□ -1.26
FAM20B-201ENST00000263733 KIAA1109Q2LD37 5005 aa7.14□□□□□ -1.27
FAM20B-201ENST00000263733 DNAH7Q8WXX0 4024 aa7.13□□□□□ -1.27
FAM20B-201ENST00000263733 RYR3Q15413 4870 aa7.13□□□□□ -1.27
FAM20B-201ENST00000263733 SPRR2FQ96RM1 72 aa7.05□□□□□ -1.28
FAM20B-201ENST00000263733 KRTAP19-8Q3LI54 63 aa7□□□□□ -1.29
FAM20B-201ENST00000263733 MT1XP80297 61 aa7□□□□□ -1.29
FAM20B-201ENST00000263733 LRP2P98164 4655 aa6.97□□□□□ -1.29
FAM20B-201ENST00000263733 SPRR5A0A1B0GTR4 108 aa6.97□□□□□ -1.29
FAM20B-201ENST00000263733 MT1BP07438 61 aa6.88□□□□□ -1.31
FAM20B-201ENST00000263733 RYR2Q92736 4967 aa6.84□□□□□ -1.32
FAM20B-201ENST00000263733 LCE3BQ5TA77 95 aa6.82□□□□□ -1.32
FAM20B-201ENST00000263733 KRTAP4-8A0A0G2JLE6 195 aa6.82□□□□□ -1.32
FAM20B-201ENST00000263733 KRTAP4-8Q9BYQ9 185 aa6.82□□□□□ -1.32
FAM20B-201ENST00000263733 HYDINQ4G0P3 5121 aa6.82□□□□□ -1.32
FAM20B-201ENST00000263733 KRTAP12-4P60329 112 aa6.81□□□□□ -1.32
FAM20B-201ENST00000263733 PKHD1P08F94 4074 aa6.78□□□□□ -1.32
FAM20B-201ENST00000263733 MT1GP13640 62 aa6.78□□□□□ -1.32
FAM20B-201ENST00000263733 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
FAM20B-201ENST00000263733 LPAP08519 4548 aa6.77□□□□□ -1.33
FAM20B-201ENST00000263733 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
FAM20B-201ENST00000263733 HSPG2P98160 4391 aa6.69□□□□□ -1.34
FAM20B-201ENST00000263733 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
FAM20B-201ENST00000263733 PKD1P98161 4303 aa6.65□□□□□ -1.35
FAM20B-201ENST00000263733 HERC2O95714 4834 aa6.62□□□□□ -1.35
FAM20B-201ENST00000263733 KMT2CQ8NEZ4 4911 aaKnown RBP6.61□□□□□ -1.35
FAM20B-201ENST00000263733 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
FAM20B-201ENST00000263733 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
FAM20B-201ENST00000263733 SPRR2EP22531 72 aa6.46□□□□□ -1.38
FAM20B-201ENST00000263733 SPRR2BP35325 72 aa6.46□□□□□ -1.38
FAM20B-201ENST00000263733 SPRR2AP35326 72 aa6.46□□□□□ -1.38
FAM20B-201ENST00000263733 TNXBP22105 4242 aa6.42□□□□□ -1.38
FAM20B-201ENST00000263733 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
FAM20B-201ENST00000263733 PCLOQ9Y6V0 5065 aa6.41□□□□□ -1.38
FAM20B-201ENST00000263733 LCE3DQ9BYE3 92 aa6.41□□□□□ -1.38
FAM20B-201ENST00000263733 PKHD1L1Q86WI1 4243 aa6.39□□□□□ -1.39
FAM20B-201ENST00000263733 MUC17Q685J3 4493 aa6.36□□□□□ -1.39
FAM20B-201ENST00000263733 HERC1Q15751 4861 aa6.35□□□□□ -1.39
FAM20B-201ENST00000263733 MT1LQ93083 61 aa6.32□□□□□ -1.4
FAM20B-201ENST00000263733 LCE3EQ5T5B0 92 aa6.3□□□□□ -1.4
FAM20B-201ENST00000263733 LCE2BO14633 110 aa6.3□□□□□ -1.4
FAM20B-201ENST00000263733 FLGP20930 4061 aaPredicted RBP6.29□□□□□ -1.4
FAM20B-201ENST00000263733 MT1EP04732 61 aa6.24□□□□□ -1.41
FAM20B-201ENST00000263733 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
FAM20B-201ENST00000263733 SPRR2DP22532 72 aa6.21□□□□□ -1.42
FAM20B-201ENST00000263733 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
FAM20B-201ENST00000263733 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
FAM20B-201ENST00000263733 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
FAM20B-201ENST00000263733 KRTAP4-3Q9BYR4 195 aa6.09□□□□□ -1.44
FAM20B-201ENST00000263733 ABCA13Q86UQ4 5058 aa6.08□□□□□ -1.44
FAM20B-201ENST00000263733 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
FAM20B-201ENST00000263733 EPPK1P58107 5090 aaKnown RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms