RNA–Protein interactions for RNA: ENST00000263212.9

PPM1F-201, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PPM1F, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-201ENST00000263212 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
PPM1F-201ENST00000263212 DNAH5Q8TE73 4624 aa6.23□□□□□ -1.41
PPM1F-201ENST00000263212 DNAH10Q8IVF4 4471 aa6.2□□□□□ -1.42
PPM1F-201ENST00000263212 DNAH1Q9P2D7 4330 aa6.2□□□□□ -1.42
PPM1F-201ENST00000263212 CSMD3Q7Z407 3707 aa6.2□□□□□ -1.42
PPM1F-201ENST00000263212 ZNF469Q96JG9 3925 aaPredicted RBP6.16□□□□□ -1.42
PPM1F-201ENST00000263212 DNAH11Q96DT5 4516 aa6.14□□□□□ -1.43
PPM1F-201ENST00000263212 AKAP9Q99996 3911 aa6.13□□□□□ -1.43
PPM1F-201ENST00000263212 PLECQ15149 4684 aaKnown RBP6.13□□□□□ -1.43
PPM1F-201ENST00000263212 DNAH17Q9UFH2 4485 aa6.12□□□□□ -1.43
PPM1F-201ENST00000263212 VPS13DQ5THJ4 4388 aa6.08□□□□□ -1.44
PPM1F-201ENST00000263212 DNAH2Q9P225 4427 aa6.07□□□□□ -1.44
PPM1F-201ENST00000263212 KRTAP4-1Q9BYQ7 146 aa6.03□□□□□ -1.44
PPM1F-201ENST00000263212 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
PPM1F-201ENST00000263212 DYNC1H1Q14204 4646 aaKnown RBP5.94□□□□□ -1.46
PPM1F-201ENST00000263212 FAT1Q14517 4588 aa5.93□□□□□ -1.46
PPM1F-201ENST00000263212 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
PPM1F-201ENST00000263212 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
PPM1F-201ENST00000263212 LRP1BQ9NZR2 4599 aa5.87□□□□□ -1.47
PPM1F-201ENST00000263212 SACSQ9NZJ4 4579 aa5.85□□□□□ -1.47
PPM1F-201ENST00000263212 DNHD1Q96M86 4753 aa5.84□□□□□ -1.48
PPM1F-201ENST00000263212 MT1HP80294 61 aa5.83□□□□□ -1.48
PPM1F-201ENST00000263212 DYNC2H1Q8NCM8 4307 aaKnown RBP5.82□□□□□ -1.48
PPM1F-201ENST00000263212 MT2AP02795 61 aa5.82□□□□□ -1.48
PPM1F-201ENST00000263212 STARD9Q9P2P6 4700 aa5.82□□□□□ -1.48
PPM1F-201ENST00000263212 DNAH3Q8TD57 4116 aa5.82□□□□□ -1.48
PPM1F-201ENST00000263212 KRTAP8-1Q8IUC2 63 aa5.75□□□□□ -1.49
PPM1F-201ENST00000263212 ANK2Q01484 3957 aa5.74□□□□□ -1.49
PPM1F-201ENST00000263212 FAT2Q9NYQ8 4349 aa5.73□□□□□ -1.49
PPM1F-201ENST00000263212 RYR1P21817 5038 aa5.73□□□□□ -1.49
PPM1F-201ENST00000263212 KRTAP10-5P60370 271 aa5.72□□□□□ -1.49
PPM1F-201ENST00000263212 MT1FP04733 61 aa5.7□□□□□ -1.5
PPM1F-201ENST00000263212 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
PPM1F-201ENST00000263212 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
PPM1F-201ENST00000263212 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
PPM1F-201ENST00000263212 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
PPM1F-201ENST00000263212 PRKDCP78527 4128 aaKnown RBP5.57□□□□□ -1.52
PPM1F-201ENST00000263212 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
PPM1F-201ENST00000263212 KRTAP19-1Q8IUB9 90 aa5.53□□□□□ -1.52
PPM1F-201ENST00000263212 KMT2AQ03164 3969 aa5.52□□□□□ -1.53
PPM1F-201ENST00000263212 MYCBP2O75592 4640 aa5.52□□□□□ -1.53
PPM1F-201ENST00000263212 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
PPM1F-201ENST00000263212 KIAA1109Q2LD37 5005 aa5.45□□□□□ -1.54
PPM1F-201ENST00000263212 DNAH6Q9C0G6 4158 aa5.45□□□□□ -1.54
PPM1F-201ENST00000263212 CMYA5Q8N3K9 4069 aa5.44□□□□□ -1.54
PPM1F-201ENST00000263212 BIRC6Q9NR09 4857 aa5.44□□□□□ -1.54
PPM1F-201ENST00000263212 KRTAP17-1Q9BYP8 105 aa5.43□□□□□ -1.54
PPM1F-201ENST00000263212 RYR3Q15413 4870 aa5.42□□□□□ -1.54
PPM1F-201ENST00000263212 LYSTQ99698 3801 aa5.41□□□□□ -1.54
PPM1F-201ENST00000263212 SPRR5A0A1B0GTR4 108 aa5.4□□□□□ -1.54
PPM1F-201ENST00000263212 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
PPM1F-201ENST00000263212 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
PPM1F-201ENST00000263212 RYR2Q92736 4967 aa5.38□□□□□ -1.55
PPM1F-201ENST00000263212 LRP1Q07954 4544 aaKnown RBP5.35□□□□□ -1.55
PPM1F-201ENST00000263212 MT1XP80297 61 aa5.35□□□□□ -1.55
PPM1F-201ENST00000263212 FRAS1Q86XX4 4008 aa5.33□□□□□ -1.56
PPM1F-201ENST00000263212 DNAH7Q8WXX0 4024 aa5.33□□□□□ -1.56
PPM1F-201ENST00000263212 HECTD4Q9Y4D8 3996 aa5.33□□□□□ -1.56
PPM1F-201ENST00000263212 MT1BP07438 61 aa5.29□□□□□ -1.56
PPM1F-201ENST00000263212 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
PPM1F-201ENST00000263212 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
PPM1F-201ENST00000263212 LCE2CQ5TA81 110 aa5.18□□□□□ -1.58
PPM1F-201ENST00000263212 HSPG2P98160 4391 aa5.17□□□□□ -1.58
PPM1F-201ENST00000263212 LRP2P98164 4655 aa5.15□□□□□ -1.58
PPM1F-201ENST00000263212 PKD1P98161 4303 aa5.11□□□□□ -1.59
PPM1F-201ENST00000263212 HERC1Q15751 4861 aa5.11□□□□□ -1.59
PPM1F-201ENST00000263212 KRTAP9-3Q9BYQ3 159 aa5.1□□□□□ -1.59
PPM1F-201ENST00000263212 HERC2O95714 4834 aa5.07□□□□□ -1.6
PPM1F-201ENST00000263212 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
PPM1F-201ENST00000263212 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
PPM1F-201ENST00000263212 KRTAP4-8Q9BYQ9 185 aa5.04□□□□□ -1.6
PPM1F-201ENST00000263212 HYDINQ4G0P3 5121 aa5.04□□□□□ -1.6
PPM1F-201ENST00000263212 KRTAP19-2Q3LHN2 52 aa5.03□□□□□ -1.6
PPM1F-201ENST00000263212 MT1GP13640 62 aa5.01□□□□□ -1.61
PPM1F-201ENST00000263212 LCE3BQ5TA77 95 aa5□□□□□ -1.61
PPM1F-201ENST00000263212 PKHD1P08F94 4074 aa4.95□□□□□ -1.62
PPM1F-201ENST00000263212 MUC17Q685J3 4493 aa4.91□□□□□ -1.62
PPM1F-201ENST00000263212 KMT2CQ8NEZ4 4911 aaKnown RBP4.91□□□□□ -1.62
PPM1F-201ENST00000263212 PCLOQ9Y6V0 5065 aa4.89□□□□□ -1.63
PPM1F-201ENST00000263212 SPRR2EP22531 72 aa4.87□□□□□ -1.63
PPM1F-201ENST00000263212 SPRR2BP35325 72 aa4.87□□□□□ -1.63
PPM1F-201ENST00000263212 SPRR2AP35326 72 aa4.87□□□□□ -1.63
PPM1F-201ENST00000263212 PKHD1L1Q86WI1 4243 aa4.87□□□□□ -1.63
PPM1F-201ENST00000263212 MT1LQ93083 61 aa4.85□□□□□ -1.63
PPM1F-201ENST00000263212 EPPK1P58107 5090 aaKnown RBP4.84□□□□□ -1.63
PPM1F-201ENST00000263212 LPAP08519 4548 aa4.84□□□□□ -1.64
PPM1F-201ENST00000263212 LCE3DQ9BYE3 92 aa4.83□□□□□ -1.64
PPM1F-201ENST00000263212 LCE2BO14633 110 aa4.81□□□□□ -1.64
PPM1F-201ENST00000263212 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
PPM1F-201ENST00000263212 MT1EP04732 61 aa4.8□□□□□ -1.64
PPM1F-201ENST00000263212 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
PPM1F-201ENST00000263212 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
PPM1F-201ENST00000263212 TNXBP22105 4242 aa4.79□□□□□ -1.64
PPM1F-201ENST00000263212 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
PPM1F-201ENST00000263212 SPRR2DP22532 72 aa4.71□□□□□ -1.66
PPM1F-201ENST00000263212 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
PPM1F-201ENST00000263212 ABCA13Q86UQ4 5058 aa4.67□□□□□ -1.66
PPM1F-201ENST00000263212 UBR4Q5T4S7 5183 aa4.65□□□□□ -1.67
PPM1F-201ENST00000263212 LCE2DQ5TA82 110 aaPredicted RBP4.64□□□□□ -1.67
PPM1F-201ENST00000263212 MT1MQ8N339 61 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms